Rh2DG510600

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
N/A
Physical Location & Seq
Forward (+)
73485691 .. 73486098
408 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG510600.1

Sequence Viewer

Length: 408 bp
ATGATCATCATCCTCATAGCCTCTGTGGTGTGTTACCTGCAAAGAAAATTGTTGAAGACAAAAGGTTCTAATATCAATTATATCATGATCAATGGAAGTTTTTTAGTTAGTATGGACATACAACAGATATGCATTTTCATTTTGTTATTTGGTATCTCTTCTGATTTCAAGGAAGATAATTATGTGCAAGTTATGTCGATCAGAATCAGCTTTTACTTGTGGTTCTCCAATCTGCAGGAATTCAGCTTCTCCACTATCAAAGCGGCTACAAATACCTTCTCAAGTGAAAACTTGCTTGGAGAGGGTAGGTTTGGTCCTGTTTACAAGGTAACGTGTTATATATTATTTACATACTTCAACAGTGTGGGAACTGGTATTTTAAACAAGGATATATGCAGACATTTATAG

Protein Analysis

135

Amino Acids

15.46

Weight (kDa)

8.7

Isoelectric Point (pI)

32.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 45
AciI CCGC 1 cut(s) 263
AcsI RAATTY 1 cut(s) 239
AflIII ACRYGT 1 cut(s) 332
AgsI TTSAA 3 cut(s) 55, 169, 358
AjuI GAANNNNNNNTTGG 2 cut(s) 279, 311
AluBI AGCT 2 cut(s) 210, 246
AluI AGCT 2 cut(s) 210, 246
ApoI RAATTY 1 cut(s) 239
AspS9I GGNCC 1 cut(s) 314
AvaII GGWCC 1 cut(s) 314
BbsI GAAGAC 1 cut(s) 62
BclI TGATCA 2 cut(s) 3, 87
BfmI CTRYAG 1 cut(s) 233
BfuAI ACCTGC 1 cut(s) 45
BisI GCNGC 1 cut(s) 264
BlsI GCNGC 1 cut(s) 265
Bme18I GGWCC 1 cut(s) 314
BmgT120I GGNCC 1 cut(s) 314
BpiI GAAGAC 1 cut(s) 62
BpuEI CTTGAG 1 cut(s) 265
BsaBI GATNNNNATC 2 cut(s) 8, 203
Bse1I ACTGG 1 cut(s) 376
Bse8I GATNNNNATC 2 cut(s) 8, 203
BseGI GGATG 1 cut(s) 9
BseJI GATNNNNATC 2 cut(s) 8, 203
BseNI ACTGG 1 cut(s) 376
Bsp143I GATC 3 cut(s) 3, 87, 198
BspACI CCGC 1 cut(s) 263
BspHI TCATGA 1 cut(s) 84
BspMAI CTGCAG 1 cut(s) 237
BspMI ACCTGC 1 cut(s) 45
BsrI ACTGG 1 cut(s) 376
BssMI GATC 3 cut(s) 3, 87, 198
Bst4CI ACNGT 1 cut(s) 362
Bst6I CTCTTC 1 cut(s) 163
BstF5I GGATG 1 cut(s) 9
BstKTI GATC 3 cut(s) 6, 90, 201
BstMBI GATC 3 cut(s) 3, 87, 198
BstSFI CTRYAG 1 cut(s) 233
BstV2I GAAGAC 1 cut(s) 62
BtsCI GGATG 1 cut(s) 9
BtsIMutI CAGTG 1 cut(s) 367
BveI ACCTGC 1 cut(s) 45
CciI TCATGA 1 cut(s) 84
Cfr13I GGNCC 1 cut(s) 314
CviAII CATG 1 cut(s) 85
CviJI RGCY 4 cut(s) 20, 210, 246, 266
CviKI_1 RGCY 4 cut(s) 20, 210, 246, 266
DpnI GATC 3 cut(s) 5, 89, 200
DpnII GATC 3 cut(s) 3, 87, 198
DraI TTTAAA 1 cut(s) 381
Eam1104I CTCTTC 1 cut(s) 163
EarI CTCTTC 1 cut(s) 163
Eco47I GGWCC 1 cut(s) 314
EcoRI GAATTC 1 cut(s) 239
EcoT22I ATGCAT 1 cut(s) 134
FaeI CATG 1 cut(s) 88
FatI CATG 1 cut(s) 84
FbaI TGATCA 2 cut(s) 3, 87
Fnu4HI GCNGC 1 cut(s) 264
Fsp4HI GCNGC 1 cut(s) 264
GluI GCNGC 1 cut(s) 264
Hin1II CATG 1 cut(s) 88
HinfI GANTC 1 cut(s) 204
Hpy166II GTNNAC 1 cut(s) 322
Hpy188I TCNGA 2 cut(s) 163, 203
Hpy188III TCNNGA 1 cut(s) 85
Hpy8I GTNNAC 1 cut(s) 322
HpyAV CCTTC 1 cut(s) 286
HpyCH4III ACNGT 1 cut(s) 362
HpyCH4IV ACGT 1 cut(s) 332
HpyCH4V TGCA 5 cut(s) 40, 132, 187, 235, 396
HpySE526I ACGT 1 cut(s) 332
Hsp92II CATG 1 cut(s) 88
Ksp22I TGATCA 2 cut(s) 3, 87
Kzo9I GATC 3 cut(s) 3, 87, 198
LpnPI CCDG 4 cut(s) 50, 221, 330, 357
MaeII ACGT 1 cut(s) 332
MaeIII GTNAC 2 cut(s) 32, 328
MalI GATC 3 cut(s) 5, 89, 200
MboI GATC 3 cut(s) 3, 87, 198
MboII GAAGA 3 cut(s) 67, 150, 185
MluCI AATT 4 cut(s) 47, 76, 178, 239
MnlI CCTC 3 cut(s) 23, 31, 295
Mph1103I ATGCAT 1 cut(s) 134
MseI TTAA 1 cut(s) 380
NdeII GATC 3 cut(s) 3, 87, 198
NlaIII CATG 1 cut(s) 88
NsiI ATGCAT 1 cut(s) 134
PagI TCATGA 1 cut(s) 84
PfeI GAWTC 1 cut(s) 204
PkrI GCNGC 1 cut(s) 265
PspPI GGNCC 1 cut(s) 314
PstI CTGCAG 1 cut(s) 237
SaqAI TTAA 1 cut(s) 380
SatI GCNGC 1 cut(s) 264
Sau3AI GATC 3 cut(s) 3, 87, 198
Sau96I GGNCC 1 cut(s) 314
SetI ASST 8 cut(s) 39, 67, 212, 248, 278, 311, 330, 335
SfcI CTRYAG 1 cut(s) 233
SinI GGWCC 1 cut(s) 314
SmlI CTYRAG 1 cut(s) 280
SmoI CTYRAG 1 cut(s) 280
Sse9I AATT 4 cut(s) 47, 76, 178, 239
SsiI CCGC 1 cut(s) 263
TaaI ACNGT 1 cut(s) 362
TaiI ACGT 1 cut(s) 335
TaqI TCGA 1 cut(s) 197
TasI AATT 4 cut(s) 47, 76, 178, 239
TauI GCSGC 1 cut(s) 266
TfiI GAWTC 1 cut(s) 204
Tru1I TTAA 1 cut(s) 380
Tru9I TTAA 1 cut(s) 380
TscAI CASTG 1 cut(s) 367
TspDTI ATGAA 1 cut(s) 127
TspRI CASTG 1 cut(s) 367
VpaK11BI GGWCC 1 cut(s) 314
XapI RAATTY 1 cut(s) 239
Zsp2I ATGCAT 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.