Rh3AG016600

protein serine/threonine kinase activity

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
N/A
Physical Location & Seq
Reverse (-)
1066407 .. 1068457
2051 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG016600.1

Sequence Viewer

Length: 585 bp
ATGGAGTGCTATCCTCATCCGGCTGTATATCCTGCATCTCCCTATAATCCCTATGATCAGTATGATCCCTATTATCAAGAACAAATGCCAAAGGGTCATGCCTCAACAACTAGGTCAATTATCATAGCAGCCAGTTTTATTCTCATATCAGCAATGGTGGCAATAGCCATCTGGTATTATGTGAAGAAATCAGACAGGATAGAGGAAAAGGAAAATCAAATCAAGATTGAAAAGTTCCTAGATGATCACAAATCCCATGTACCATCAAGATACTCTTATGCTGATATAAAGAAGATGACAAATGGATTCAGAAAGAAGTTGGGTGAAGGAGGTTTTGGAAGTGTTTTCAGTGGAAAGCTTCCAAGAGAAGAGTTGGATTTGGAGCTAGGTGACGACGGAGATGCTCAAATTGCCAAGAGACTAGCAATTGTTGCACTTTGGTGCATCCAGTGGTACCCGGTGAATCGTCCTTCCATGAAAGCAGTTGTTAGAATGCTAGAAGGACCCTCTGAAAGCTTCATCATGCCACCCAATCCGTTTGCTTCAACAACTCACACGGAACCAACTGCAACAGCATCGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

194

Amino Acids

21.93

Weight (kDa)

6.52

Isoelectric Point (pI)

52.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 453
AccB1I GGYRCC 1 cut(s) 453
AclWI GGATC 1 cut(s) 59
AfaI GTAC 2 cut(s) 261, 455
AgsI TTSAA 2 cut(s) 230, 546
AjuI GAANNNNNNNTTGG 2 cut(s) 318, 350
AleI CACNNNNGTG 1 cut(s) 439
AluBI AGCT 3 cut(s) 358, 385, 516
AluI AGCT 3 cut(s) 358, 385, 516
Alw26I GTCTC 1 cut(s) 412
AlwI GGATC 1 cut(s) 59
ApeKI GCWGC 1 cut(s) 128
Asp718I GGTACC 1 cut(s) 453
AspS9I GGNCC 1 cut(s) 503
AsuC2I CCSGG 1 cut(s) 458
AsuHPI GGTGA 3 cut(s) 335, 401, 472
AvaII GGWCC 1 cut(s) 503
BanI GGYRCC 1 cut(s) 453
BbvI GCAGC 1 cut(s) 140
BccI CCATC 2 cut(s) 176, 271
BcgI CGANNNNNNTGC 3 cut(s) 383, 417, 558
BclI TGATCA 2 cut(s) 55, 244
BcnI CCSGG 1 cut(s) 458
BcoDI GTCTC 1 cut(s) 412
BfaI CTAG 5 cut(s) 111, 239, 386, 422, 497
BisI GCNGC 1 cut(s) 129
BlsI GCNGC 1 cut(s) 130
Bme1390I CCNGG 1 cut(s) 458
Bme18I GGWCC 1 cut(s) 503
BmgT120I GGNCC 1 cut(s) 503
BmiI GGNNCC 3 cut(s) 455, 505, 561
BmrFI CCNGG 1 cut(s) 458
BmsI GCATC 3 cut(s) 44, 391, 453
BpuMI CCSGG 1 cut(s) 458
Bse1I ACTGG 2 cut(s) 132, 448
Bse3DI GCAATG 1 cut(s) 159
BseGI GGATG 2 cut(s) 16, 444
BseMI GCAATG 1 cut(s) 159
BseNI ACTGG 2 cut(s) 132, 448
BseXI GCAGC 1 cut(s) 140
BshNI GGYRCC 1 cut(s) 453
BsiSI CCGG 2 cut(s) 20, 458
BsmAI GTCTC 1 cut(s) 412
BsmI GAATGC 1 cut(s) 498
Bsp143I GATC 3 cut(s) 55, 64, 244
BspLI GGNNCC 3 cut(s) 455, 505, 561
BspPI GGATC 1 cut(s) 59
BspT107I GGYRCC 1 cut(s) 453
BsrDI GCAATG 1 cut(s) 159
BsrI ACTGG 2 cut(s) 132, 448
BssMI GATC 3 cut(s) 55, 64, 244
Bst6I CTCTTC 1 cut(s) 363
BstAPI GCANNNNNTGC 1 cut(s) 431
BstF5I GGATG 2 cut(s) 16, 444
BstKTI GATC 3 cut(s) 58, 67, 247
BstMAI GTCTC 1 cut(s) 412
BstMBI GATC 3 cut(s) 55, 64, 244
BstMWI GCNNNNNNNGC 3 cut(s) 158, 410, 431
BstSCI CCNGG 1 cut(s) 456
BstV1I GCAGC 1 cut(s) 140
BtsCI GGATG 2 cut(s) 16, 444
BtsIMutI CAGTG 2 cut(s) 355, 455
Cfr13I GGNCC 1 cut(s) 503
Csp6I GTAC 2 cut(s) 260, 454
CviAII CATG 4 cut(s) 98, 257, 475, 523
CviJI RGCY 6 cut(s) 23, 131, 167, 358, 385, 516
CviKI_1 RGCY 6 cut(s) 23, 131, 167, 358, 385, 516
CviQI GTAC 2 cut(s) 260, 454
DpnI GATC 3 cut(s) 57, 66, 246
DpnII GATC 3 cut(s) 55, 64, 244
Eam1104I CTCTTC 1 cut(s) 363
EarI CTCTTC 1 cut(s) 363
Eco47I GGWCC 1 cut(s) 503
EcoO109I RGGNCCY 1 cut(s) 503
FaeI CATG 4 cut(s) 101, 260, 478, 526
FalI AAGNNNNNCTT 2 cut(s) 259, 291
FatI CATG 4 cut(s) 97, 256, 474, 522
FbaI TGATCA 2 cut(s) 55, 244
Fnu4HI GCNGC 1 cut(s) 129
FokI GGATG 2 cut(s) 3, 431
Fsp4HI GCNGC 1 cut(s) 129
FspBI CTAG 5 cut(s) 111, 239, 386, 422, 497
GluI GCNGC 1 cut(s) 129
HapII CCGG 2 cut(s) 20, 458
Hin1II CATG 4 cut(s) 101, 260, 478, 526
HindIII AAGCTT 2 cut(s) 356, 514
HinfI GANTC 2 cut(s) 306, 463
HpaII CCGG 2 cut(s) 20, 458
HphI GGTGA 3 cut(s) 335, 401, 472
Hpy188I TCNGA 3 cut(s) 193, 311, 511
Hpy188III TCNNGA 3 cut(s) 77, 223, 267
Hpy99I CGWCG 1 cut(s) 398
HpyAV CCTTC 3 cut(s) 320, 480, 494
HpyCH4V TGCA 4 cut(s) 35, 434, 444, 569
HpyF10VI GCNNNNNNNGC 3 cut(s) 158, 410, 431
Hsp92II CATG 4 cut(s) 101, 260, 478, 526
KpnI GGTACC 1 cut(s) 457
Ksp22I TGATCA 2 cut(s) 55, 244
Kzo9I GATC 3 cut(s) 55, 64, 244
LmnI GCTCC 1 cut(s) 382
LpnPI CCDG 7 cut(s) 33, 45, 145, 157, 181, 461, 471
Lsp1109I GCAGC 1 cut(s) 140
LweI GCATC 3 cut(s) 44, 391, 453
MaeI CTAG 5 cut(s) 111, 239, 386, 422, 497
MaeIII GTNAC 1 cut(s) 389
MalI GATC 3 cut(s) 57, 66, 246
MboI GATC 3 cut(s) 55, 64, 244
MboII GAAGA 3 cut(s) 196, 304, 380
MfeI CAATTG 1 cut(s) 426
MluCI AATT 3 cut(s) 117, 408, 426
MmeI TCCRAC 1 cut(s) 354
MnlI CCTC 5 cut(s) 24, 112, 196, 323, 517
MslI CAYNNNNRTG 1 cut(s) 439
MspI CCGG 2 cut(s) 20, 458
MspR9I CCNGG 1 cut(s) 458
MunI CAATTG 1 cut(s) 426
Mva1269I GAATGC 1 cut(s) 498
MwoI GCNNNNNNNGC 3 cut(s) 158, 410, 431
NciI CCSGG 1 cut(s) 458
NdeII GATC 3 cut(s) 55, 64, 244
NlaIII CATG 4 cut(s) 101, 260, 478, 526
NlaIV GGNNCC 3 cut(s) 455, 505, 561
NmuCI GTSAC 1 cut(s) 389
OliI CACNNNNGTG 1 cut(s) 439
PctI GAATGC 1 cut(s) 498
PfeI GAWTC 2 cut(s) 306, 463
PkrI GCNGC 1 cut(s) 130
PpuMI RGGWCCY 1 cut(s) 503
Psp5II RGGWCCY 1 cut(s) 503
PspN4I GGNNCC 3 cut(s) 455, 505, 561
PspPI GGNCC 1 cut(s) 503
PspPPI RGGWCCY 1 cut(s) 503
RsaI GTAC 2 cut(s) 261, 455
RsaNI GTAC 2 cut(s) 260, 454
RseI CAYNNNNRTG 1 cut(s) 439
SatI GCNGC 1 cut(s) 129
Sau3AI GATC 3 cut(s) 55, 64, 244
Sau96I GGNCC 1 cut(s) 503
ScrFI CCNGG 1 cut(s) 458
SetI ASST 6 cut(s) 116, 334, 360, 387, 391, 518
SfaNI GCATC 3 cut(s) 44, 391, 453
SinI GGWCC 1 cut(s) 503
SmiMI CAYNNNNRTG 1 cut(s) 439
Sse9I AATT 3 cut(s) 117, 408, 426
SspMI CTAG 5 cut(s) 111, 239, 386, 422, 497
StyD4I CCNGG 1 cut(s) 456
TaqI TCGA 1 cut(s) 578
TasI AATT 3 cut(s) 117, 408, 426
TfiI GAWTC 2 cut(s) 306, 463
TscAI CASTG 2 cut(s) 355, 455
TseFI GTSAC 1 cut(s) 389
TseI GCWGC 1 cut(s) 128
Tsp45I GTSAC 1 cut(s) 389
TspDTI ATGAA 2 cut(s) 491, 508
TspGWI ACGGA 3 cut(s) 411, 525, 572
TspRI CASTG 2 cut(s) 355, 455
VpaK11BI GGWCC 1 cut(s) 503
XspI CTAG 5 cut(s) 111, 239, 386, 422, 497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.