Rh3AG068300
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
N/A
Physical Location & Seq
Reverse (-)
4751363 .. 4751728
366 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG068300.1

Sequence Viewer

Length: 291 bp
ATGATATTGACTAAGACGAAGGAAACAGCTGAGGCTTATTCAGGGAAGAAGATCAAATACGCTGTCATAACTGTTCCAGCTTATTTCAATGATGCACAAAGGCAGGCTACTAAGGATGCAGGCAAAATTGCCGGGCTCAAAGTGGATCGAGTAATTAATGAGCCCACGGCTGCGGCCATTGCCCATGGTATTGACAAGAATAAGGAGGAGGAGAACATATTGGTTTATGACCTTGGCGGTGGTGCATTTGATGTTAGCATCTTGACTGTGATCGAGGTGATCTCTTACTAG

Protein Analysis

96

Amino Acids

10.39

Weight (kDa)

5.77

Isoelectric Point (pI)

37.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 1 - 90 1.7e-46 Hsp70 protein
MreB_Mbl PF06723 15 - 94 2.3e-10 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 173, 237
AclWI GGATC 1 cut(s) 153
AcoI YGGCCR 1 cut(s) 174
AgsI TTSAA 1 cut(s) 88
AluBI AGCT 2 cut(s) 29, 80
AluI AGCT 2 cut(s) 29, 80
AlwI GGATC 1 cut(s) 153
AoxI GGCC 1 cut(s) 174
ApeKI GCWGC 1 cut(s) 170
ArsI GACNNNNNNTTYG 2 cut(s) 48, 80
AseI ATTAAT 1 cut(s) 156
AsuC2I CCSGG 1 cut(s) 133
AsuHPI GGTGA 1 cut(s) 289
BanII GRGCYC 2 cut(s) 138, 165
BarI GAAGNNNNNNTAC 2 cut(s) 41, 73
BbvCI CCTCAGC 1 cut(s) 30
BbvI GCAGC 1 cut(s) 157
BceAI ACGGC 1 cut(s) 183
BcnI CCSGG 1 cut(s) 133
BfaI CTAG 1 cut(s) 289
BisI GCNGC 2 cut(s) 171, 174
BlsI GCNGC 2 cut(s) 172, 175
Bme1390I CCNGG 1 cut(s) 133
BmrFI CCNGG 1 cut(s) 133
BmsI GCATC 3 cut(s) 82, 106, 267
BplI GAGNNNNNCTC 1 cut(s) 266
Bpu10I CCTNAGC 1 cut(s) 30
BpuMI CCSGG 1 cut(s) 133
BsaJI CCNNGG 3 cut(s) 165, 184, 232
Bse3DI GCAATG 1 cut(s) 177
BseDI CCNNGG 3 cut(s) 165, 184, 232
BseGI GGATG 1 cut(s) 121
BseMI GCAATG 1 cut(s) 177
BseMII CTCAG 1 cut(s) 21
BseRI GAGGAG 2 cut(s) 221, 224
BseXI GCAGC 1 cut(s) 157
BshFI GGCC 1 cut(s) 176
BsiSI CCGG 1 cut(s) 132
BsnI GGCC 1 cut(s) 176
Bsp1286I GDGCHC 2 cut(s) 138, 165
Bsp143I GATC 4 cut(s) 51, 145, 270, 279
Bsp19I CCATGG 1 cut(s) 184
BspACI CCGC 2 cut(s) 173, 237
BspANI GGCC 1 cut(s) 176
BspCNI CTCAG 1 cut(s) 22
BspPI GGATC 1 cut(s) 153
BsrDI GCAATG 1 cut(s) 177
BssECI CCNNGG 3 cut(s) 165, 184, 232
BssMI GATC 4 cut(s) 51, 145, 270, 279
BssT1I CCWWGG 2 cut(s) 184, 232
Bst4CI ACNGT 2 cut(s) 73, 268
BstC8I GCNNGC 2 cut(s) 105, 121
BstDEI CTNAG 3 cut(s) 12, 30, 111
BstDSI CCRYGG 2 cut(s) 165, 184
BstF5I GGATG 1 cut(s) 121
BstKTI GATC 4 cut(s) 54, 148, 273, 282
BstMBI GATC 4 cut(s) 51, 145, 270, 279
BstMWI GCNNNNNNNGC 1 cut(s) 179
BstSCI CCNGG 1 cut(s) 131
BstV1I GCAGC 1 cut(s) 157
BsuRI GGCC 1 cut(s) 176
BtgI CCRYGG 2 cut(s) 165, 184
BtsCI GGATG 1 cut(s) 121
Cac8I GCNNGC 2 cut(s) 105, 121
CviAII CATG 1 cut(s) 185
CviJI RGCY 8 cut(s) 29, 35, 80, 107, 136, 163, 170, 176
CviKI_1 RGCY 8 cut(s) 29, 35, 80, 107, 136, 163, 170, 176
DdeI CTNAG 3 cut(s) 12, 30, 111
DpnI GATC 4 cut(s) 53, 147, 272, 281
DpnII GATC 4 cut(s) 51, 145, 270, 279
EaeI YGGCCR 1 cut(s) 174
Eco130I CCWWGG 2 cut(s) 184, 232
Eco24I GRGCYC 2 cut(s) 138, 165
EcoT14I CCWWGG 2 cut(s) 184, 232
EcoT38I GRGCYC 2 cut(s) 138, 165
ErhI CCWWGG 2 cut(s) 184, 232
FaeI CATG 1 cut(s) 188
FaiI YATR 4 cut(s) 68, 186, 218, 228
FatI CATG 1 cut(s) 184
Fnu4HI GCNGC 2 cut(s) 171, 174
FokI GGATG 1 cut(s) 128
FriOI GRGCYC 2 cut(s) 138, 165
Fsp4HI GCNGC 2 cut(s) 171, 174
FspBI CTAG 1 cut(s) 289
GluI GCNGC 2 cut(s) 171, 174
HaeIII GGCC 1 cut(s) 176
HapII CCGG 1 cut(s) 132
Hin1II CATG 1 cut(s) 188
HpaII CCGG 1 cut(s) 132
HphI GGTGA 1 cut(s) 289
Hpy188III TCNNGA 1 cut(s) 262
HpyAV CCTTC 1 cut(s) 13
HpyCH4III ACNGT 2 cut(s) 73, 268
HpyCH4V TGCA 3 cut(s) 95, 119, 245
HpyF10VI GCNNNNNNNGC 1 cut(s) 179
HpyF3I CTNAG 3 cut(s) 12, 30, 111
Hsp92II CATG 1 cut(s) 188
Kzo9I GATC 4 cut(s) 51, 145, 270, 279
LpnPI CCDG 5 cut(s) 27, 89, 90, 105, 145
Lsp1109I GCAGC 1 cut(s) 157
LweI GCATC 3 cut(s) 82, 106, 267
MaeI CTAG 1 cut(s) 289
MalI GATC 4 cut(s) 53, 147, 272, 281
MboI GATC 4 cut(s) 51, 145, 270, 279
MboII GAAGA 2 cut(s) 58, 61
MhlI GDGCHC 2 cut(s) 138, 165
MluCI AATT 2 cut(s) 126, 153
MnlI CCTC 4 cut(s) 25, 199, 202, 268
MseI TTAA 1 cut(s) 156
MspA1I CMGCKG 1 cut(s) 29
MspI CCGG 1 cut(s) 132
MspR9I CCNGG 1 cut(s) 133
MwoI GCNNNNNNNGC 1 cut(s) 179
NciI CCSGG 1 cut(s) 133
NcoI CCATGG 1 cut(s) 184
NdeII GATC 4 cut(s) 51, 145, 270, 279
NlaIII CATG 1 cut(s) 188
PkrI GCNGC 2 cut(s) 172, 175
PshBI ATTAAT 1 cut(s) 156
PvuII CAGCTG 1 cut(s) 29
SaqAI TTAA 1 cut(s) 156
SatI GCNGC 2 cut(s) 171, 174
Sau3AI GATC 4 cut(s) 51, 145, 270, 279
ScrFI CCNGG 1 cut(s) 133
SduI GDGCHC 2 cut(s) 138, 165
SetI ASST 4 cut(s) 31, 82, 234, 279
SfaNI GCATC 3 cut(s) 82, 106, 267
Sse9I AATT 2 cut(s) 126, 153
SsiI CCGC 2 cut(s) 173, 237
SspMI CTAG 1 cut(s) 289
StyD4I CCNGG 1 cut(s) 131
StyI CCWWGG 2 cut(s) 184, 232
TaaI ACNGT 2 cut(s) 73, 268
TaqI TCGA 2 cut(s) 148, 273
TasI AATT 2 cut(s) 126, 153
TauI GCSGC 1 cut(s) 176
Tru1I TTAA 1 cut(s) 156
Tru9I TTAA 1 cut(s) 156
TseI GCWGC 1 cut(s) 170
VspI ATTAAT 1 cut(s) 156
XspI CTAG 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.