Rh3CG098300

Cell division control protein 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
N/A
Physical Location & Seq
Forward (+)
7699783 .. 7701741
1959 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG098300.1

Sequence Viewer

Length: 558 bp
ATGGAAAAGTACGAGAAGCTGGAGAAGGTCGGCGAAGGCACCTACGGCAAGGTGTACAAGGCCAAGGACAAAGCCACCGGCCAATTGGTCGCTCTGAAGAAGACGCGCCTCGAGATGGACGAAGAAGGCGTGCCCCCCACCGCCCTCCGCGAGGTCTCGCTCCTCCAGATGCTGTCCCAGTCGCTCTACGTGGTCCGCCTCCTCTGCGTCGAACACGTGGACAACAAGAAGGACGGCAAGCCGGTGCTCTACCTCGTCTTCGAGTACCTCGACACCGATCTGAAGAAGTTTATTGATTCCTACCGGAAGGGACCGAATCCGAGGGCGCTGCTAGGAACACCGACTGAGAAGCAGTGGGCTGGTGTCACTACTCTGCGGGATTGGCATGTTTATCCAGTGTGGGAGCCTCAGAACTTGGCTCGTGCTGTTCCTGCTTTGGGGCCTGATGGAGTGGACCTTTTATCTAGAATGCTTAAATATGATCCAGCTGAGAGAATTTCAGCCAAAGAAGCAATGGACCATCCTTACTTTGATAGCCTCGATAAGTCTCAGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000082 GO:0000278 GO:0000307 GO:0000902 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0009058 GO:0009059 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009888 GO:0009889 GO:0009987 GO:0010016 GO:0010033 GO:0010103 GO:0010154 GO:0010374 GO:0010376 GO:0010389 GO:0010440 GO:0010444 GO:0010468 GO:0010556 GO:0010564 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0022414 GO:0023052 GO:0030154 GO:0030332 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032875 GO:0032989 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0040007 GO:0042023 GO:0042127 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044770 GO:0044772 GO:0044786 GO:0044843 GO:0046483 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048589 GO:0048608 GO:0048646 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051239 GO:0051716 GO:0051726 GO:0060255 GO:0060560 GO:0061458 GO:0061695 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0097472 GO:0099402 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901987 GO:1901990 GO:1902494 GO:1902554 GO:1902749 GO:1902806 GO:1902911 GO:1903047 GO:1990234 GO:2000026 GO:2000037 GO:2000112
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

185

Amino Acids

21.12

Weight (kDa)

6.85

Isoelectric Point (pI)

23.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 4 - 99 1.3e-14 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 6 - 107 2.9e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 38
AccII CGCG 2 cut(s) 106, 150
AciI CCGC 4 cut(s) 141, 148, 196, 376
AclWI GGATC 1 cut(s) 476
AcoI YGGCCR 1 cut(s) 79
AcsI RAATTY 1 cut(s) 495
AcuI CTGAAG 2 cut(s) 116, 302
AcvI CACGTG 1 cut(s) 217
AfaI GTAC 3 cut(s) 11, 56, 266
AfiI CCNNNNNNNGG 3 cut(s) 115, 151, 437
AflIII ACRYGT 1 cut(s) 214
AluBI AGCT 2 cut(s) 19, 488
AluI AGCT 2 cut(s) 19, 488
Alw21I GWGCWC 1 cut(s) 249
Alw26I GTCTC 2 cut(s) 160, 552
AlwI GGATC 1 cut(s) 476
AlwNI CAGNNNCTG 1 cut(s) 172
Ama87I CYCGRG 1 cut(s) 110
AoxI GGCC 3 cut(s) 60, 79, 440
ApeKI GCWGC 1 cut(s) 328
ApoI RAATTY 1 cut(s) 495
AspLEI GCGC 2 cut(s) 108, 328
AspS9I GGNCC 5 cut(s) 193, 311, 440, 454, 517
AvaI CYCGRG 1 cut(s) 110
AvaII GGWCC 4 cut(s) 193, 311, 454, 517
BaeGI GKGCMC 1 cut(s) 135
BanI GGYRCC 1 cut(s) 38
BauI CACGAG 1 cut(s) 420
BbrPI CACGTG 1 cut(s) 217
BbsI GAAGAC 2 cut(s) 107, 250
Bbv12I GWGCWC 1 cut(s) 249
BbvI GCAGC 1 cut(s) 315
BccI CCATC 3 cut(s) 109, 440, 528
BceAI ACGGC 2 cut(s) 61, 250
BcgI CGANNNNNNTGC 2 cut(s) 310, 344
BcoDI GTCTC 2 cut(s) 160, 552
BfaI CTAG 2 cut(s) 332, 465
BfoI RGCGCY 1 cut(s) 329
BisI GCNGC 1 cut(s) 329
BlsI GCNGC 1 cut(s) 330
Bme18I GGWCC 4 cut(s) 193, 311, 454, 517
BmeT110I CYCGRG 1 cut(s) 110
BmgT120I GGNCC 5 cut(s) 193, 311, 440, 454, 517
BmiI GGNNCC 4 cut(s) 40, 312, 405, 441
BmrI ACTGGG 1 cut(s) 172
BmsI GCATC 1 cut(s) 159
BmuI ACTGGG 1 cut(s) 172
BpiI GAAGAC 2 cut(s) 107, 250
BpmI CTGGAG 2 cut(s) 41, 149
BsaAI YACGTR 2 cut(s) 190, 217
BsaI GGTCTC 1 cut(s) 160
BsaJI CCNNGG 2 cut(s) 63, 320
BsaWI WCCGGW 1 cut(s) 303
Bsc4I CCNNNNNNNGG 3 cut(s) 115, 151, 437
Bse118I RCCGGY 2 cut(s) 77, 241
Bse1I ACTGG 2 cut(s) 178, 395
Bse3DI GCAATG 1 cut(s) 519
BseDI CCNNGG 2 cut(s) 63, 320
BseGI GGATG 1 cut(s) 520
BseLI CCNNNNNNNGG 3 cut(s) 115, 151, 437
BseMI GCAATG 1 cut(s) 519
BseMII CTCAG 3 cut(s) 336, 422, 480
BseNI ACTGG 2 cut(s) 178, 395
BseRI GAGGAG 2 cut(s) 152, 191
BseSI GKGCMC 1 cut(s) 135
BseXI GCAGC 1 cut(s) 315
Bsh1236I CGCG 2 cut(s) 106, 150
BshFI GGCC 3 cut(s) 62, 81, 442
BshNI GGYRCC 1 cut(s) 38
BsiHKAI GWGCWC 1 cut(s) 249
BsiHKCI CYCGRG 1 cut(s) 110
BsiSI CCGG 3 cut(s) 78, 242, 304
BslFI GGGAC 2 cut(s) 160, 324
BslI CCNNNNNNNGG 3 cut(s) 115, 151, 437
BsmAI GTCTC 2 cut(s) 160, 552
BsmFI GGGAC 2 cut(s) 160, 324
BsmI GAATGC 1 cut(s) 474
BsnI GGCC 3 cut(s) 62, 81, 442
Bso31I GGTCTC 1 cut(s) 160
BsoBI CYCGRG 1 cut(s) 110
Bsp1286I GDGCHC 2 cut(s) 135, 249
Bsp1407I TGTACA 1 cut(s) 54
Bsp143I GATC 2 cut(s) 277, 481
BspACI CCGC 4 cut(s) 141, 148, 196, 376
BspANI GGCC 3 cut(s) 62, 81, 442
BspCNI CTCAG 3 cut(s) 337, 421, 481
BspFNI CGCG 2 cut(s) 106, 150
BspLI GGNNCC 4 cut(s) 40, 312, 405, 441
BspPI GGATC 1 cut(s) 476
BspT107I GGYRCC 1 cut(s) 38
BspTNI GGTCTC 1 cut(s) 160
BsrDI GCAATG 1 cut(s) 519
BsrFI RCCGGY 2 cut(s) 77, 241
BsrGI TGTACA 1 cut(s) 54
BsrI ACTGG 2 cut(s) 178, 395
BssAI RCCGGY 2 cut(s) 77, 241
BssECI CCNNGG 2 cut(s) 63, 320
BssMI GATC 2 cut(s) 277, 481
BssSI CACGAG 1 cut(s) 420
BssT1I CCWWGG 1 cut(s) 63
Bst2BI CACGAG 1 cut(s) 420
BstAUI TGTACA 1 cut(s) 54
BstBAI YACGTR 2 cut(s) 190, 217
BstC8I GCNNGC 2 cut(s) 131, 239
BstDEI CTNAG 4 cut(s) 345, 408, 489, 549
BstENI CCTNNNNNAGG 1 cut(s) 149
BstF5I GGATG 1 cut(s) 520
BstFNI CGCG 2 cut(s) 106, 150
BstH2I RGCGCY 1 cut(s) 329
BstHHI GCGC 2 cut(s) 108, 328
BstKTI GATC 2 cut(s) 280, 484
BstMAI GTCTC 2 cut(s) 160, 552
BstMBI GATC 2 cut(s) 277, 481
BstMWI GCNNNNNNNGC 5 cut(s) 45, 204, 382, 431, 509
BstNSI RCATGY 1 cut(s) 389
BstSLI GKGCMC 1 cut(s) 135
BstUI CGCG 2 cut(s) 106, 150
BstV1I GCAGC 1 cut(s) 315
BstV2I GAAGAC 2 cut(s) 107, 250
BsuRI GGCC 3 cut(s) 62, 81, 442
BtsCI GGATG 1 cut(s) 520
BtsI GCAGTG 1 cut(s) 359
BtsIMutI CAGTG 2 cut(s) 359, 402
Cac8I GCNNGC 2 cut(s) 131, 239
CaiI CAGNNNCTG 1 cut(s) 172
CfoI GCGC 2 cut(s) 108, 328
Cfr10I RCCGGY 2 cut(s) 77, 241
Cfr13I GGNCC 5 cut(s) 193, 311, 440, 454, 517
CseI GACGC 2 cut(s) 112, 196
Csp6I GTAC 3 cut(s) 10, 55, 265
CviAII CATG 1 cut(s) 386
CviQI GTAC 3 cut(s) 10, 55, 265
DdeI CTNAG 4 cut(s) 345, 408, 489, 549
DpnI GATC 2 cut(s) 279, 483
DpnII GATC 2 cut(s) 277, 481
EaeI YGGCCR 1 cut(s) 79
EciI GGCGGA 1 cut(s) 185
Eco130I CCWWGG 1 cut(s) 63
Eco31I GGTCTC 1 cut(s) 160
Eco47I GGWCC 4 cut(s) 193, 311, 454, 517
Eco57I CTGAAG 2 cut(s) 116, 302
Eco72I CACGTG 1 cut(s) 217
Eco88I CYCGRG 1 cut(s) 110
EcoNI CCTNNNNNAGG 1 cut(s) 149
EcoO109I RGGNCCY 1 cut(s) 440
EcoT14I CCWWGG 1 cut(s) 63
ErhI CCWWGG 1 cut(s) 63
FaeI CATG 1 cut(s) 389
FaiI YATR 2 cut(s) 387, 480
FaqI GGGAC 2 cut(s) 160, 324
FatI CATG 1 cut(s) 385
FauI CCCGC 1 cut(s) 369
Fnu4HI GCNGC 1 cut(s) 329
FokI GGATG 1 cut(s) 507
Fsp4HI GCNGC 1 cut(s) 329
FspBI CTAG 2 cut(s) 332, 465
GlaI GCGC 2 cut(s) 107, 327
GluI GCNGC 1 cut(s) 329
GsuI CTGGAG 2 cut(s) 41, 149
HaeII RGCGCY 1 cut(s) 329
HaeIII GGCC 3 cut(s) 62, 81, 442
HapII CCGG 3 cut(s) 78, 242, 304
HgaI GACGC 2 cut(s) 112, 196
HhaI GCGC 2 cut(s) 108, 328
Hin1II CATG 1 cut(s) 389
Hin6I GCGC 2 cut(s) 106, 326
HinP1I GCGC 2 cut(s) 106, 326
HinfI GANTC 2 cut(s) 296, 316
HpaII CCGG 3 cut(s) 78, 242, 304
Hpy166II GTNNAC 3 cut(s) 55, 220, 454
Hpy188I TCNGA 5 cut(s) 96, 282, 321, 411, 557
Hpy188III TCNNGA 3 cut(s) 112, 166, 465
Hpy8I GTNNAC 3 cut(s) 55, 220, 454
Hpy99I CGWCG 1 cut(s) 212
HpyAV CCTTC 5 cut(s) 19, 29, 119, 223, 301
HpyCH4IV ACGT 2 cut(s) 189, 216
HpyF10VI GCNNNNNNNGC 5 cut(s) 45, 204, 382, 431, 509
HpyF3I CTNAG 4 cut(s) 345, 408, 489, 549
HpySE526I ACGT 2 cut(s) 189, 216
Hsp92II CATG 1 cut(s) 389
HspAI GCGC 2 cut(s) 106, 326
Kzo9I GATC 2 cut(s) 277, 481
LmnI GCTCC 2 cut(s) 165, 403
Lsp1109I GCAGC 1 cut(s) 315
LweI GCATC 1 cut(s) 159
MaeI CTAG 2 cut(s) 332, 465
MaeII ACGT 2 cut(s) 189, 216
MaeIII GTNAC 1 cut(s) 364
MalI GATC 2 cut(s) 279, 483
MboI GATC 2 cut(s) 277, 481
MboII GAAGA 5 cut(s) 109, 112, 134, 250, 295
MfeI CAATTG 1 cut(s) 83
MhlI GDGCHC 2 cut(s) 135, 249
MluCI AATT 2 cut(s) 83, 495
MseI TTAA 1 cut(s) 474
MspA1I CMGCKG 1 cut(s) 488
MspI CCGG 3 cut(s) 78, 242, 304
MunI CAATTG 1 cut(s) 83
Mva1269I GAATGC 1 cut(s) 474
MvnI CGCG 2 cut(s) 106, 150
MwoI GCNNNNNNNGC 5 cut(s) 45, 204, 382, 431, 509
NdeII GATC 2 cut(s) 277, 481
NlaIII CATG 1 cut(s) 389
NlaIV GGNNCC 4 cut(s) 40, 312, 405, 441
NmuCI GTSAC 1 cut(s) 364
NspI RCATGY 1 cut(s) 389
PaeR7I CTCGAG 1 cut(s) 110
PcsI WCGNNNNNNNCGW 3 cut(s) 117, 126, 267
PctI GAATGC 1 cut(s) 474
PfeI GAWTC 2 cut(s) 296, 316
PkrI GCNGC 1 cut(s) 330
PmaCI CACGTG 1 cut(s) 217
PmlI CACGTG 1 cut(s) 217
Ppu21I YACGTR 2 cut(s) 190, 217
PspCI CACGTG 1 cut(s) 217
PspN4I GGNNCC 4 cut(s) 40, 312, 405, 441
PspPI GGNCC 5 cut(s) 193, 311, 440, 454, 517
PstNI CAGNNNCTG 1 cut(s) 172
PvuII CAGCTG 1 cut(s) 488
RsaI GTAC 3 cut(s) 11, 56, 266
RsaNI GTAC 3 cut(s) 10, 55, 265
SaqAI TTAA 1 cut(s) 474
SatI GCNGC 1 cut(s) 329
Sau3AI GATC 2 cut(s) 277, 481
Sau96I GGNCC 5 cut(s) 193, 311, 440, 454, 517
SduI GDGCHC 2 cut(s) 135, 249
SfaNI GCATC 1 cut(s) 159
Sfr274I CTCGAG 1 cut(s) 110
SinI GGWCC 4 cut(s) 193, 311, 454, 517
SlaI CTCGAG 1 cut(s) 110
SmlI CTYRAG 1 cut(s) 110
SmoI CTYRAG 1 cut(s) 110
Sse9I AATT 2 cut(s) 83, 495
SsiI CCGC 4 cut(s) 141, 148, 196, 376
SspMI CTAG 2 cut(s) 332, 465
StyI CCWWGG 1 cut(s) 63
TaiI ACGT 2 cut(s) 192, 219
TaqI TCGA 5 cut(s) 111, 210, 261, 270, 540
TaqII GACCGA 1 cut(s) 328
TasI AATT 2 cut(s) 83, 495
TatI WGTACW 1 cut(s) 54
TfiI GAWTC 2 cut(s) 296, 316
Tru1I TTAA 1 cut(s) 474
Tru9I TTAA 1 cut(s) 474
TscAI CASTG 2 cut(s) 359, 402
TseFI GTSAC 1 cut(s) 364
TseI GCWGC 1 cut(s) 328
Tsp45I GTSAC 1 cut(s) 364
TspRI CASTG 2 cut(s) 359, 402
VpaK11BI GGWCC 4 cut(s) 193, 311, 454, 517
XagI CCTNNNNNAGG 1 cut(s) 149
XapI RAATTY 1 cut(s) 495
XbaI TCTAGA 1 cut(s) 464
XceI RCATGY 1 cut(s) 389
XcmI CCANNNNNNNNNTGG 2 cut(s) 82, 511
XhoI CTCGAG 1 cut(s) 110
XspI CTAG 2 cut(s) 332, 465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.