Rh3CG158400
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
N/A
Physical Location & Seq
Forward (+)
13315910 .. 13318689
2780 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG158400.1

Sequence Viewer

Length: 348 bp
ATGACTCTACTAAGTATTGTGTTTCCACTGGATTCATGCAACCACATTTTCACTCTCTTCCCAACTGAAGACCCTAACGACCAGTTTTTCACTCTGGGAGGTTTTGAAGTGGTGACAATGGCGGGACAGGCAATTGGAATCGATTTGGGGACGACTTACTCGTGCGTTGCAGTTTGGCAGAATGATCATGTAGAAATCATAGTGAATGATCAGGGCAACAGGACCACTCCTTCTTATGTTGCCTTCAATGGAACTGAGCGTTTGGTTGGTGATGCAGCTTTCAACCAGGTTTATATAATTATAACTGAAATTGAAGCAAACCCTATTCTATTTTGGCTAATTGCATAG
Functional Annotation

Protein Analysis

115

Amino Acids

12.73

Weight (kDa)

4.05

Isoelectric Point (pI)

33.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 44 - 98 4.6e-22 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 302
AciI CCGC 1 cut(s) 122
AcuI CTGAAG 1 cut(s) 87
AgsI TTSAA 4 cut(s) 107, 247, 283, 314
AjnI CCWGG 1 cut(s) 285
AluBI AGCT 1 cut(s) 278
AluI AGCT 1 cut(s) 278
ApeKI GCWGC 1 cut(s) 275
AspS9I GGNCC 1 cut(s) 222
AsuHPI GGTGA 2 cut(s) 124, 281
AvaII GGWCC 1 cut(s) 222
BauI CACGAG 1 cut(s) 160
BbsI GAAGAC 1 cut(s) 75
BbvI GCAGC 1 cut(s) 287
BciT130I CCWGG 1 cut(s) 287
BclI TGATCA 2 cut(s) 184, 208
BisI GCNGC 1 cut(s) 276
BlsI GCNGC 1 cut(s) 277
Bme1390I CCNGG 1 cut(s) 287
Bme18I GGWCC 1 cut(s) 222
BmgT120I GGNCC 1 cut(s) 222
BmrFI CCNGG 1 cut(s) 287
BmsI GCATC 1 cut(s) 262
BpiI GAAGAC 1 cut(s) 75
Bsa29I ATCGAT 1 cut(s) 141
Bse1I ACTGG 2 cut(s) 33, 82
BseBI CCWGG 1 cut(s) 287
BseCI ATCGAT 1 cut(s) 141
BseMII CTCAG 1 cut(s) 246
BseNI ACTGG 2 cut(s) 33, 82
BseXI GCAGC 1 cut(s) 287
BshVI ATCGAT 1 cut(s) 141
BslFI GGGAC 2 cut(s) 138, 163
BsmFI GGGAC 2 cut(s) 138, 163
Bsp143I GATC 2 cut(s) 184, 208
BspACI CCGC 1 cut(s) 122
BspCNI CTCAG 1 cut(s) 247
BspDI ATCGAT 1 cut(s) 141
BsrI ACTGG 2 cut(s) 33, 82
BssMI GATC 2 cut(s) 184, 208
BssSI CACGAG 1 cut(s) 160
Bst2BI CACGAG 1 cut(s) 160
Bst2UI CCWGG 1 cut(s) 287
Bst6I CTCTTC 1 cut(s) 62
BstDEI CTNAG 2 cut(s) 11, 255
BstKTI GATC 2 cut(s) 187, 211
BstMBI GATC 2 cut(s) 184, 208
BstMWI GCNNNNNNNGC 1 cut(s) 128
BstNI CCWGG 1 cut(s) 287
BstSCI CCNGG 1 cut(s) 285
BstV1I GCAGC 1 cut(s) 287
BstV2I GAAGAC 1 cut(s) 75
Bsu15I ATCGAT 1 cut(s) 141
BsuTUI ATCGAT 1 cut(s) 141
BtsIMutI CAGTG 1 cut(s) 26
Cfr13I GGNCC 1 cut(s) 222
ClaI ATCGAT 1 cut(s) 141
CsiI ACCWGGT 1 cut(s) 285
CviAII CATG 2 cut(s) 36, 188
CviJI RGCY 2 cut(s) 278, 337
CviKI_1 RGCY 2 cut(s) 278, 337
DdeI CTNAG 2 cut(s) 11, 255
DpnI GATC 2 cut(s) 186, 210
DpnII GATC 2 cut(s) 184, 208
Eam1104I CTCTTC 1 cut(s) 62
EarI CTCTTC 1 cut(s) 62
Eco47I GGWCC 1 cut(s) 222
Eco57I CTGAAG 1 cut(s) 87
EcoRII CCWGG 1 cut(s) 285
FaeI CATG 2 cut(s) 39, 191
FaiI YATR 8 cut(s) 37, 189, 200, 237, 294, 296, 302, 346
FaqI GGGAC 2 cut(s) 138, 163
FatI CATG 2 cut(s) 35, 187
FauI CCCGC 1 cut(s) 115
FbaI TGATCA 2 cut(s) 184, 208
Fnu4HI GCNGC 1 cut(s) 276
Fsp4HI GCNGC 1 cut(s) 276
GluI GCNGC 1 cut(s) 276
Hin1II CATG 2 cut(s) 39, 191
HinfI GANTC 3 cut(s) 4, 32, 138
HphI GGTGA 2 cut(s) 124, 281
HpyAV CCTTC 2 cut(s) 240, 253
HpyCH4V TGCA 4 cut(s) 39, 170, 275, 344
HpyF10VI GCNNNNNNNGC 1 cut(s) 128
HpyF3I CTNAG 2 cut(s) 11, 255
Hsp92II CATG 2 cut(s) 39, 191
Ksp22I TGATCA 2 cut(s) 184, 208
Kzo9I GATC 2 cut(s) 184, 208
LpnPI CCDG 8 cut(s) 14, 80, 95, 113, 197, 205, 272, 299
Lsp1109I GCAGC 1 cut(s) 287
LweI GCATC 1 cut(s) 262
MabI ACCWGGT 1 cut(s) 285
MaeIII GTNAC 1 cut(s) 112
MalI GATC 2 cut(s) 186, 210
MboI GATC 2 cut(s) 184, 208
MboII GAAGA 2 cut(s) 49, 80
MfeI CAATTG 1 cut(s) 132
MluCI AATT 4 cut(s) 132, 297, 309, 339
MnlI CCTC 1 cut(s) 92
MspR9I CCNGG 1 cut(s) 287
MunI CAATTG 1 cut(s) 132
MvaI CCWGG 1 cut(s) 287
MwoI GCNNNNNNNGC 1 cut(s) 128
NdeII GATC 2 cut(s) 184, 208
NlaIII CATG 2 cut(s) 39, 191
NmuCI GTSAC 1 cut(s) 112
PcsI WCGNNNNNNNCGW 1 cut(s) 158
PfeI GAWTC 2 cut(s) 32, 138
PkrI GCNGC 1 cut(s) 277
PsiI TTATAA 1 cut(s) 302
Psp6I CCWGG 1 cut(s) 285
PspGI CCWGG 1 cut(s) 285
PspPI GGNCC 1 cut(s) 222
SatI GCNGC 1 cut(s) 276
Sau3AI GATC 2 cut(s) 184, 208
Sau96I GGNCC 1 cut(s) 222
ScrFI CCNGG 1 cut(s) 287
SetI ASST 3 cut(s) 103, 280, 291
SexAI ACCWGGT 1 cut(s) 285
SfaNI GCATC 1 cut(s) 262
SinI GGWCC 1 cut(s) 222
Sse9I AATT 4 cut(s) 132, 297, 309, 339
SsiI CCGC 1 cut(s) 122
StyD4I CCNGG 1 cut(s) 285
TaqI TCGA 1 cut(s) 141
TasI AATT 4 cut(s) 132, 297, 309, 339
TfiI GAWTC 2 cut(s) 32, 138
TscAI CASTG 1 cut(s) 33
TseFI GTSAC 1 cut(s) 112
TseI GCWGC 1 cut(s) 275
Tsp45I GTSAC 1 cut(s) 112
TspDTI ATGAA 1 cut(s) 24
TspRI CASTG 1 cut(s) 33
VpaK11BI GGWCC 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.