Rh3CG158500
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
N/A
Physical Location & Seq
Forward (+)
13319379 .. 13321593
2215 bp
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UTR
Exon/CDS
Intron
Rh3CG158500.1

Sequence Viewer

Length: 285 bp
ATGCCGGGAGAAGAAAAGGGCAAAGCAATAGGGATCGATCTGGGGACGACTTACTCCTGCGTGGCAGTGTGGACGAACGATCATGTAGAAGTCATTGTGAACGATCAGGGCAACAGGACTACTCCTTCTTATGTTGCCTTCAATGATGCTGAACGATTGGTAGGGGATGCAGCATTTAACCAGGTCCTCAAAAACCCCACCAATTCCATCTTTGGATTTGAGACATTTGAGAACAAAATGGTATGGGGAAAAGACAGGCAAGAGAACAATAGGTATTCCTCATAA
Functional Annotation

Protein Analysis

94

Amino Acids

10.51

Weight (kDa)

4.81

Isoelectric Point (pI)

17.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 74 5.4e-26 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 41
AgsI TTSAA 1 cut(s) 142
AjnI CCWGG 1 cut(s) 180
Alw26I GTCTC 1 cut(s) 215
AlwI GGATC 1 cut(s) 41
ApeKI GCWGC 1 cut(s) 170
AspS9I GGNCC 1 cut(s) 184
AsuC2I CCSGG 1 cut(s) 6
AvaII GGWCC 1 cut(s) 184
BbvI GCAGC 1 cut(s) 182
BccI CCATC 1 cut(s) 215
BciT130I CCWGG 1 cut(s) 182
BcnI CCSGG 1 cut(s) 6
BcoDI GTCTC 1 cut(s) 215
BisI GCNGC 1 cut(s) 171
BlsI GCNGC 1 cut(s) 172
Bme1390I CCNGG 2 cut(s) 6, 182
Bme18I GGWCC 1 cut(s) 184
BmgT120I GGNCC 1 cut(s) 184
BmrFI CCNGG 2 cut(s) 6, 182
BmsI GCATC 2 cut(s) 136, 157
BpuMI CCSGG 1 cut(s) 6
Bsa29I ATCGAT 1 cut(s) 36
BseBI CCWGG 1 cut(s) 182
BseCI ATCGAT 1 cut(s) 36
BseGI GGATG 1 cut(s) 172
BseXI GCAGC 1 cut(s) 182
BshVI ATCGAT 1 cut(s) 36
BsiSI CCGG 1 cut(s) 5
BslFI GGGAC 1 cut(s) 58
BsmAI GTCTC 1 cut(s) 215
BsmFI GGGAC 1 cut(s) 58
Bsp143I GATC 4 cut(s) 33, 37, 79, 103
BspDI ATCGAT 1 cut(s) 36
BspPI GGATC 1 cut(s) 41
BssMI GATC 4 cut(s) 33, 37, 79, 103
Bst2UI CCWGG 1 cut(s) 182
BstF5I GGATG 1 cut(s) 172
BstKTI GATC 4 cut(s) 36, 40, 82, 106
BstMAI GTCTC 1 cut(s) 215
BstMBI GATC 4 cut(s) 33, 37, 79, 103
BstNI CCWGG 1 cut(s) 182
BstSCI CCNGG 2 cut(s) 4, 180
BstV1I GCAGC 1 cut(s) 182
Bsu15I ATCGAT 1 cut(s) 36
BsuTUI ATCGAT 1 cut(s) 36
BtsCI GGATG 1 cut(s) 172
BtsI GCAGTG 1 cut(s) 72
BtsIMutI CAGTG 1 cut(s) 72
Cfr13I GGNCC 1 cut(s) 184
ClaI ATCGAT 1 cut(s) 36
CsiI ACCWGGT 1 cut(s) 180
CviAII CATG 1 cut(s) 83
DpnI GATC 4 cut(s) 35, 39, 81, 105
DpnII GATC 4 cut(s) 33, 37, 79, 103
Eco47I GGWCC 1 cut(s) 184
EcoO109I RGGNCCY 1 cut(s) 184
EcoRII CCWGG 1 cut(s) 180
FaeI CATG 1 cut(s) 86
FaiI YATR 4 cut(s) 84, 132, 244, 283
FaqI GGGAC 1 cut(s) 58
FatI CATG 1 cut(s) 82
Fnu4HI GCNGC 1 cut(s) 171
FokI GGATG 1 cut(s) 179
Fsp4HI GCNGC 1 cut(s) 171
GluI GCNGC 1 cut(s) 171
HapII CCGG 1 cut(s) 5
Hin1II CATG 1 cut(s) 86
HpaII CCGG 1 cut(s) 5
Hpy166II GTNNAC 2 cut(s) 72, 100
Hpy8I GTNNAC 2 cut(s) 72, 100
HpyAV CCTTC 2 cut(s) 135, 148
HpyCH4V TGCA 1 cut(s) 170
Hsp92II CATG 1 cut(s) 86
Kzo9I GATC 4 cut(s) 33, 37, 79, 103
LpnPI CCDG 8 cut(s) 18, 26, 70, 92, 100, 167, 194, 241
Lsp1109I GCAGC 1 cut(s) 182
LweI GCATC 2 cut(s) 136, 157
MabI ACCWGGT 1 cut(s) 180
MalI GATC 4 cut(s) 35, 39, 81, 105
MboI GATC 4 cut(s) 33, 37, 79, 103
MboII GAAGA 1 cut(s) 23
MluCI AATT 1 cut(s) 202
MnlI CCTC 1 cut(s) 197
MseI TTAA 1 cut(s) 177
MspI CCGG 1 cut(s) 5
MspR9I CCNGG 2 cut(s) 6, 182
MvaI CCWGG 1 cut(s) 182
NciI CCSGG 1 cut(s) 6
NdeII GATC 4 cut(s) 33, 37, 79, 103
NlaIII CATG 1 cut(s) 86
PkrI GCNGC 1 cut(s) 172
PpuMI RGGWCCY 1 cut(s) 184
Psp5II RGGWCCY 1 cut(s) 184
Psp6I CCWGG 1 cut(s) 180
PspGI CCWGG 1 cut(s) 180
PspPI GGNCC 1 cut(s) 184
PspPPI RGGWCCY 1 cut(s) 184
SaqAI TTAA 1 cut(s) 177
SatI GCNGC 1 cut(s) 171
Sau3AI GATC 4 cut(s) 33, 37, 79, 103
Sau96I GGNCC 1 cut(s) 184
ScrFI CCNGG 2 cut(s) 6, 182
SetI ASST 2 cut(s) 186, 275
SexAI ACCWGGT 1 cut(s) 180
SfaNI GCATC 2 cut(s) 136, 157
SinI GGWCC 1 cut(s) 184
Sse9I AATT 1 cut(s) 202
StyD4I CCNGG 2 cut(s) 4, 180
TaqI TCGA 1 cut(s) 36
TasI AATT 1 cut(s) 202
Tru1I TTAA 1 cut(s) 177
Tru9I TTAA 1 cut(s) 177
TscAI CASTG 1 cut(s) 72
TseI GCWGC 1 cut(s) 170
TspRI CASTG 1 cut(s) 72
VpaK11BI GGWCC 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.