Rh3CG158600
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
N/A
Physical Location & Seq
Forward (+)
13322107 .. 13325182
3076 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG158600.1

Sequence Viewer

Length: 396 bp
ATGGCGGGAGAAGAAAAGGGCCAGGCAATTGGGATCGATCTGGGGACGACTTACTCTTGCGTAGCAGTTTGGCAGAACGATCATGTGGAAATCATAGTGAATGATCAGGGCAACAGGACCACTCCATCTTATGTTGCCTTCAATGATACTGAGCGTTTGGTTGGTGATGCAGCTTTCAACCAGGTCATCAAGAACCCCATAAATTCCGTATTTGGTAGGTTATGTCTTAGGTTACCATCCGTCATTGTAGACAATGAGGCAGTTGAGAATAAAATGATGCAAGTGACAAGCCGTGAACGAACAGCAGAGCAGACCAAGTCATTATCATCTCGAGCTGCTGAAGTGTACTACAATCTATCTTTCACGTGCGAGTACCTTGCAAGTATAAATAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

131

Amino Acids

14.53

Weight (kDa)

4.8

Isoelectric Point (pI)

24.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 97 5.2e-26 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 249
AciI CCGC 1 cut(s) 5
AclWI GGATC 1 cut(s) 41
AcsI RAATTY 1 cut(s) 202
AcuI CTGAAG 1 cut(s) 360
AcvI CACGTG 1 cut(s) 366
AfaI GTAC 2 cut(s) 347, 374
AgsI TTSAA 2 cut(s) 142, 178
AjnI CCWGG 2 cut(s) 21, 180
AluBI AGCT 2 cut(s) 173, 335
AluI AGCT 2 cut(s) 173, 335
AlwI GGATC 1 cut(s) 41
Ama87I CYCGRG 1 cut(s) 330
AoxI GGCC 1 cut(s) 19
ApeKI GCWGC 2 cut(s) 170, 335
ApoI RAATTY 1 cut(s) 202
AspS9I GGNCC 2 cut(s) 19, 117
AsuHPI GGTGA 1 cut(s) 176
AvaI CYCGRG 1 cut(s) 330
AvaII GGWCC 1 cut(s) 117
BbrPI CACGTG 1 cut(s) 366
BbvI GCAGC 2 cut(s) 182, 322
BccI CCATC 2 cut(s) 133, 244
BceAI ACGGC 1 cut(s) 276
BcgI CGANNNNNNTGC 2 cut(s) 359, 393
BciT130I CCWGG 2 cut(s) 23, 182
BclI TGATCA 1 cut(s) 103
BisI GCNGC 2 cut(s) 171, 336
BlsI GCNGC 2 cut(s) 172, 337
Bme1390I CCNGG 2 cut(s) 23, 182
Bme18I GGWCC 1 cut(s) 117
BmeT110I CYCGRG 1 cut(s) 330
BmgT120I GGNCC 2 cut(s) 19, 117
BmrFI CCNGG 2 cut(s) 23, 182
BmsI GCATC 2 cut(s) 157, 267
Bsa29I ATCGAT 1 cut(s) 36
BsaAI YACGTR 1 cut(s) 366
BseBI CCWGG 2 cut(s) 23, 182
BseCI ATCGAT 1 cut(s) 36
BseGI GGATG 1 cut(s) 236
BseMII CTCAG 1 cut(s) 141
BseXI GCAGC 2 cut(s) 182, 322
BshFI GGCC 1 cut(s) 21
BshVI ATCGAT 1 cut(s) 36
BsiHKCI CYCGRG 1 cut(s) 330
BslFI GGGAC 1 cut(s) 58
BsmFI GGGAC 1 cut(s) 58
BsnI GGCC 1 cut(s) 21
BsoBI CYCGRG 1 cut(s) 330
Bsp143I GATC 4 cut(s) 33, 37, 79, 103
BspACI CCGC 1 cut(s) 5
BspANI GGCC 1 cut(s) 21
BspCNI CTCAG 1 cut(s) 142
BspDI ATCGAT 1 cut(s) 36
BspPI GGATC 1 cut(s) 41
BssMI GATC 4 cut(s) 33, 37, 79, 103
Bst2UI CCWGG 2 cut(s) 23, 182
BstBAI YACGTR 1 cut(s) 366
BstDEI CTNAG 2 cut(s) 150, 227
BstEII GGTNACC 1 cut(s) 231
BstF5I GGATG 1 cut(s) 236
BstKTI GATC 4 cut(s) 36, 40, 82, 106
BstMBI GATC 4 cut(s) 33, 37, 79, 103
BstNI CCWGG 2 cut(s) 23, 182
BstPI GGTNACC 1 cut(s) 231
BstSCI CCNGG 2 cut(s) 21, 180
BstV1I GCAGC 2 cut(s) 182, 322
BstXI CCANNNNNNTGG 1 cut(s) 29
Bsu15I ATCGAT 1 cut(s) 36
BsuRI GGCC 1 cut(s) 21
BsuTUI ATCGAT 1 cut(s) 36
BtsCI GGATG 1 cut(s) 236
Cfr13I GGNCC 2 cut(s) 19, 117
ClaI ATCGAT 1 cut(s) 36
CsiI ACCWGGT 1 cut(s) 180
Csp6I GTAC 2 cut(s) 346, 373
CviAII CATG 1 cut(s) 83
CviJI RGCY 4 cut(s) 21, 173, 291, 335
CviKI_1 RGCY 4 cut(s) 21, 173, 291, 335
CviQI GTAC 2 cut(s) 346, 373
DdeI CTNAG 2 cut(s) 150, 227
DpnI GATC 4 cut(s) 35, 39, 81, 105
DpnII GATC 4 cut(s) 33, 37, 79, 103
Eco47I GGWCC 1 cut(s) 117
Eco57I CTGAAG 1 cut(s) 360
Eco72I CACGTG 1 cut(s) 366
Eco88I CYCGRG 1 cut(s) 330
Eco91I GGTNACC 1 cut(s) 231
EcoO65I GGTNACC 1 cut(s) 231
EcoRII CCWGG 2 cut(s) 21, 180
FaeI CATG 1 cut(s) 86
FaiI YATR 6 cut(s) 84, 95, 132, 200, 223, 386
FaqI GGGAC 1 cut(s) 58
FatI CATG 1 cut(s) 82
FbaI TGATCA 1 cut(s) 103
FblI GTMKAC 1 cut(s) 249
Fnu4HI GCNGC 2 cut(s) 171, 336
FokI GGATG 1 cut(s) 223
Fsp4HI GCNGC 2 cut(s) 171, 336
GluI GCNGC 2 cut(s) 171, 336
HaeIII GGCC 1 cut(s) 21
Hin1II CATG 1 cut(s) 86
HphI GGTGA 1 cut(s) 176
Hpy166II GTNNAC 3 cut(s) 250, 296, 346
Hpy188III TCNNGA 2 cut(s) 190, 330
Hpy8I GTNNAC 3 cut(s) 250, 296, 346
HpyAV CCTTC 1 cut(s) 148
HpyCH4IV ACGT 1 cut(s) 365
HpyCH4V TGCA 3 cut(s) 170, 280, 380
HpyF3I CTNAG 2 cut(s) 150, 227
HpySE526I ACGT 1 cut(s) 365
Hsp92II CATG 1 cut(s) 86
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 4 cut(s) 33, 37, 79, 103
LpnPI CCDG 7 cut(s) 8, 26, 35, 92, 100, 167, 194
Lsp1109I GCAGC 2 cut(s) 182, 322
LweI GCATC 2 cut(s) 157, 267
MabI ACCWGGT 1 cut(s) 180
MaeII ACGT 1 cut(s) 365
MaeIII GTNAC 2 cut(s) 231, 283
MalI GATC 4 cut(s) 35, 39, 81, 105
MboI GATC 4 cut(s) 33, 37, 79, 103
MboII GAAGA 1 cut(s) 23
MfeI CAATTG 1 cut(s) 27
MluCI AATT 3 cut(s) 27, 202, 391
MnlI CCTC 1 cut(s) 250
MspR9I CCNGG 2 cut(s) 23, 182
MunI CAATTG 1 cut(s) 27
MvaI CCWGG 2 cut(s) 23, 182
NdeII GATC 4 cut(s) 33, 37, 79, 103
NlaIII CATG 1 cut(s) 86
NmuCI GTSAC 1 cut(s) 283
PaeR7I CTCGAG 1 cut(s) 330
PflFI GACNNNGTC 1 cut(s) 316
PkrI GCNGC 2 cut(s) 172, 337
PmaCI CACGTG 1 cut(s) 366
PmlI CACGTG 1 cut(s) 366
Ppu21I YACGTR 1 cut(s) 366
Psp6I CCWGG 2 cut(s) 21, 180
PspCI CACGTG 1 cut(s) 366
PspEI GGTNACC 1 cut(s) 231
PspGI CCWGG 2 cut(s) 21, 180
PspPI GGNCC 2 cut(s) 19, 117
PsyI GACNNNGTC 1 cut(s) 316
RsaI GTAC 2 cut(s) 347, 374
RsaNI GTAC 2 cut(s) 346, 373
SatI GCNGC 2 cut(s) 171, 336
Sau3AI GATC 4 cut(s) 33, 37, 79, 103
Sau96I GGNCC 2 cut(s) 19, 117
ScrFI CCNGG 2 cut(s) 23, 182
SetI ASST 7 cut(s) 175, 186, 221, 233, 337, 368, 378
SexAI ACCWGGT 1 cut(s) 180
SfaNI GCATC 2 cut(s) 157, 267
Sfr274I CTCGAG 1 cut(s) 330
SinI GGWCC 1 cut(s) 117
SlaI CTCGAG 1 cut(s) 330
SmlI CTYRAG 1 cut(s) 330
SmoI CTYRAG 1 cut(s) 330
Sse9I AATT 3 cut(s) 27, 202, 391
SsiI CCGC 1 cut(s) 5
StyD4I CCNGG 2 cut(s) 21, 180
TaiI ACGT 1 cut(s) 368
TaqI TCGA 2 cut(s) 36, 331
TasI AATT 3 cut(s) 27, 202, 391
TatI WGTACW 1 cut(s) 345
TseFI GTSAC 1 cut(s) 283
TseI GCWGC 2 cut(s) 170, 335
Tsp45I GTSAC 1 cut(s) 283
TspGWI ACGGA 2 cut(s) 196, 229
Tth111I GACNNNGTC 1 cut(s) 316
VpaK11BI GGWCC 1 cut(s) 117
XapI RAATTY 1 cut(s) 202
XhoI CTCGAG 1 cut(s) 330
XmiI GTMKAC 1 cut(s) 249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.