Rh3DG202200

ADP binding

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
N/A
Physical Location & Seq
Forward (+)
18399721 .. 18408142
8422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG202200.1

Sequence Viewer

Length: 4464 bp
ATGGCTCAAGCTTCTTCTGCCAATCCGTCAATTTCTCGATCATATGCATACCACGTGTACTTGAGTTTCAGGGGGGAAGACACGCGCAAGACTTTTACCGATCACCTTTACACAGCCTTGTTGAACGCAGGATTTCGTACGTTCCGAGATGACCACGAGCTTGAAGTTGGAGGAGTGGACATTAAGCCAGAACTGCAGAAAGCCATCTACGAGTCGCGGTCTTCGGTGATCGTGCTTTCAAAAGACTATGCGTCTTCTGGATGGTGCCTTGATGAGCTGGTCATGATCCTTGAATGCAAGAGGATCTCCGACCATATCGTCTTACCAGTCTTCTACGACGTGGATCCTTCCGACGTGAGGTATCAGAAGGGAAGCGTTGCAAAAGCATTTGCTAGACACGGAAAACGTCAATCCTTGAGCAAGATAAACGGATGGAGAGCAGCACTTAAGGAAGTTGCAGATCTATCGGGAATGGTCTTGCAGAATGAAGCTGATGGGCATGAGTCACAGTTTATCAAAAAAATTGTAAGAGTGATTGAAGACAGACTAGTGCTCAGATCGTTTTCAGTTAGCCCCTTCTTGATTGGAGTCGATTCTCGTGCCGAAAAGATCAATTTATGGTTACAAGATGGTTCTGCTGATGTTGGCGTACGTATGATTTGTGGGATGCGTGGAGTAGGGAAGACAACCATTGCAAAGTATGTTTATAATTTACACTTCCACAGGTTTGAAGGAAGCAGTTTCCTTGAAAACATGAGAGAAACTGCACAACATGTTCATGGCTTGGTAAAATTACAAAAAAAATTGCTTCATGATATTCTTGGAAGAAAAGTGAATATACAGAATGTAAGTGAGGGAATGTCTAAGATTAAAGATGTCTTATGTAGCAGAAGAGTACTCCTTGTTCTTGATGATGTAGATGATATCCACCAATTAGATTTTATACTTGAGTTGAGAAATTCAATTTTTCCAGGAAGTAAAATTATCATAACCACTACAAATGTAGGGTTGTCAAAGGGTCAACTGGATACTCAGTGTCATTTTGTTGAAACTTTGGATTACAATGAATCATTAGAGCTCTTCAGTTGGCATGCATTTGGACAAGACCACCCCTTTGAACGTTACATAGAACTTTCAAGTAGGACAGTAGACCATTGCAGAGGACTTCCATCAGCTCTCATCATTTTGGGTTCTTCTCTAGCGGGGAAAGGCATAGACGTGTGGGAGAGTGCATTGCGGAAGTTGCAAGTTATTCCAGTTACAGAAGTAATAATTAAGCTAAAATTAAGCTATGACTCTTTACAAGACTCCCATGACCAAAATCTCTTCCTCCACATTGCTTGTTTCTTTATTGGGAAAAACACAGATACCGTTGTTAGAATCCTGGATGGATGTGGATTTTTCACAGCTATTGGCCTTGAAAATCTCATTGACAGGTGCTTGGTAACAATTGATAAAAATAACAAGGTGTGTATGCATCCCATGATTCGTGACATGGGGAGAGTAATTGTTCGTCTTGAGTCTCAGGAGCCTCAAGAGCGTAGTAGACTATGGCATCGCAAAGATTGTCTCGAAGTATTGACAAGAAAGAATGGCACAGACAAAATTGAAGGTCTTGTCCTCAATATGCCCAAGACGAACAATTCAGTCTTAGAAAGCAATGCATTTAGAGGGATGCACAGACTAAGCCTACTTCGACTCAGTAATGTACGACTAATTGGATCCTATGAAGAGTTTCCTAGAAAATTAAGTTGGTTGTGTTGGCTTGGATTTCCGTTGAATTGCATACCTACTAATATTTTTTTGGGAACACTGGTTGTTCTTGAAATGCACTACAGCAGTTTGAAACATGTCTGGAAGGGAAGAAAGTTTCTTCCCTCACTGAAGATCCTTGATGTCAGCCACTCTCATGACCTTGTTGAAGTTGGTGACTTCTCTCTGGTTTGCAATCTAGAGAGATTGATTCTTAAAGATTGTAGAAGTTTGATTGGTATCCATGAATCTATTGGCGTGCTAGAAAAACTGGTTTACTTGAATATGGAAGATTGCAAAAGTATCAACAAGTTTCCAACAAATATGCCAAAATCCCTTGAAGCTATTATTACTCTAGGTTGCTCAAATCTTTGCGAGTTTACAGTTACAGAGACGAGGAGGATGAAACTTCTGAAACAGTTTGACGTAGATGAAGCTCAAGTGAAAGGTTTATTCGCTGGGGCAGCGAAATCAGGGCTCAGTCTCTCTGACTACACGGGGTTCCACAAATCTTTAAAACTTACTGTTCATCTGAGACCGGCTTTCATGCGTGAGAGCCAGATGTCTATGCAGCTCATTAGGAATCTCATAAGGAGTCGATATCTTGATAGTCGACTCCTTGATAGTGCTGCTGCTCTGCGTCATAAACACAGACTGTCAACTCCGAAAATGAATTGTGCAGAAAGAGAGAGTCTCCCAGAGCGATTGGAGGTTGTAGATGAGGGTTCTACAATAATGAAAGGTGATAATGTGGATTTGGAAGATAAAACTACTTTAACTCCATTATTGAAACAGTTGCTGTTTCTGTATTGCTCCCTCTTTCCGTTAGATTACGAATTCAAAAAATATGAGCTGGTTCAGTTATGGATAGCTCAAGGTTTTATTGGAGAGACCCAAAAGGAGACAATGGAGGATACTGGTATTTCGTATTTTACTTCTTTGGAAAATGAAGGTTATTTTGTCCCATCAAGACTGGATTTCTCGGTGAATTTTGATTCCTTGTTTTCGATGCCCATTTATAATACCAGCAACTTCTTGTACAGAGTAAATGCTACCAAGCTTTCAGTTCTGGATAAGAGAATTGATGGGGGTAATTATTTCCAAGCGGTGAATGTAGGTCAGCTATGTGGGGCATCTGAATCATTGACGAAACATTTGTCTTTGAAGATCTCTGAAAGCAATGATGAGATGACTTATGGGGCTGTTCAGAAATTCAAGAATTTGCAAACACTGCTCTTGTTCTCTAGTTCTGTCTCTTCCGTCAAACATGTTCCTCGTGATTTGTTTTTGAGCTTACATGAATTGAGAACATTGAATTTGAGTCGAGCACTCATTTCTGGATTGCCAAGTTCCATAGGAGAAGCAAGACAATTACGATATCTTGATGTCTCCTACACACCCATCACACGGTTACCTGAATCTGTTAGTTCTCTTCACCAGCTACAAACCTTAAAACTCCGAGGTTGTGTACACTTTTCCATGCTACCAAGGGCCACAAAGAACCTAACCAATCTACGGCATATCGAGCTTGATATCATTCTGCAACTGGATGCCATGCCTACATATTTGGGGAACTTGACCAACCTTCAAACTTTGTCAGCGTTTCTTGTTGGTACAGATGATGGGTGCCGTATTAATGAGCTGAAGAATTTGAATGATCTTAAAGGAGCACTTGGCATTTCAGGGCTTGAAAATGTCGCGAGTAAGGAAGAGGCTGAGGAAGCTGCTCTGTTAAACAAGAAATACCTGCAGAGACTGAATCTCCGATGGAGTAATGTGATGGCTGATGAGAAATCTGATGAGGAGAAATTGACTGTCCAAAACAAAGAGAAAGCAATGTACACCGAAGAAGAAGTAATCCTTGAATCTCTTCGACCCCCTAATGGACTGAAGGAGTTGCAAATTGAACACTATGCCGGGTCAATACTTCCAAGTTGGATTAGTGATCCAATTTTCGCTGACCTTGTTGTTATAACCCTCTACAGATGCAAGCATTGTACACTTGTCCCATCTTTGGGGCTATTGCCAGAGCTCAAGTCTCTTTCTATAATAGAGATGAATGCGGTGGAAGAAATAAATCAGGAGTTTTTCAAAAATGACGGAGTTGATGATCAATCACTGCAAGCATTTCCAAAACTTGAGATGCTAGAAGTTGACATCATGCTTAATTTGAAAGACTGGAAGGGGATACAAATAGGAGACTTGCCGGTCCTACATAAACTCACAGTAAAGTCTTGCCCAGAACTGGTCACTATTCCATCAGTTTCAATCCTCAAATCCCTCAAGCATTTGGAATTCAGGCGCTGTCCAAAGCTTCCCTCCCTTCCCAATGACGGGCTACCAACTTCACTCGAGTCTTTTATAATAAAAGATTGCCCTCAACTGGAAAAAAGCTGCCTTAATGTCAAGGGGGAAGACTGGAGCAAGATATGCTGTGTGCCAAACGTGTGGTTTGATGATGAAGAGATAATTTCCCAAGGATCTTCAGTGAAGGATTCTGATGATGTTGTTACAACTTCGCGAGAGGATGATGTTCAATCGGCTGCAGACGAAGAATTGATGCAGTGTCTCGAAATTCTCAACAATATGGAGGAAATTGATGATGATAGTTATTCAAAAGCTTTGAAATTTTTTCATGGTGAAATTAGCTGGAGAAAGGTGTTTGTGCACATGGCTGAAAAAAGAAGGAAAGGTTTTATCCTTAACCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

1487

Amino Acids

168.62

Weight (kDa)

6.27

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 16 - 180 4.1e-47 TIR domain
TIR_2 PF13676 19 - 116 1.7e-14 TIR domain
NB-ARC PF00931 200 - 367 9.4e-17 NB-ARC domain
WHD_ROQ1 PF23282 438 - 507 1.9e-20 Disease resistance protein Roq1-like, winged-helix domain
WHD_DRP PF23559 857 - 904 4e-13 Disease resistance protein Winged helix domain
LRR_14 PF23598 971 - 1173 6.7e-18 Leucine-rich repeat region
LRR_14 PF23598 1035 - 1303 1.3e-23 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 1129 - 1270 3.5e-36 R13L1/DRL21 LRRs
LRR_RPS2 PF23247 1234 - 1349 2.4e-07 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 708, 2772, 3725, 4115
AasI GACNNNNNNGTC 2 cut(s) 317, 3959
Acc36I ACCTGC 1 cut(s) 3507
AccB1I GGYRCC 2 cut(s) 264, 3378
AccI GTMKAC 3 cut(s) 1149, 1546, 2365
AccII CGCG 4 cut(s) 85, 217, 3452, 4273
AciI CCGC 5 cut(s) 217, 1202, 1237, 2858, 3815
AclI AACGTT 1 cut(s) 1120
AclWI GGATC 9 cut(s) 280, 311, 338, 351, 1716, 1729, 1882, 3692, 4240
AcuI CTGAAG 5 cut(s) 1066, 1904, 3416, 3662, 4221
AcvI CACGTG 1 cut(s) 55
AflII CTTAAG 1 cut(s) 446
AflIII ACRYGT 6 cut(s) 54, 772, 1218, 1849, 3019, 4197
AhdI GACNNNNNGTC 1 cut(s) 250
AhlI ACTAGT 1 cut(s) 547
AjiI CACGTC 3 cut(s) 340, 355, 1219
AjnI CCWGG 2 cut(s) 970, 1383
AjuI GAANNNNNNNTTGG 2 cut(s) 1735, 1767
Alw21I GWGCWC 6 cut(s) 555, 1080, 3082, 3424, 3786, 4422
Alw44I GTGCAC 1 cut(s) 4418
AlwI GGATC 9 cut(s) 280, 311, 338, 351, 1716, 1729, 1882, 3692, 4240
AlwNI CAGNNNCTG 3 cut(s) 2551, 3508, 4056
Ama87I CYCGRG 1 cut(s) 4103
AoxI GGCC 2 cut(s) 1414, 3243
ApaLI GTGCAC 1 cut(s) 4418
ApeKI GCWGC 8 cut(s) 440, 2216, 2323, 2381, 2384, 3476, 4146, 4295
ArsI GACNNNNNNTTYG 6 cut(s) 1097, 1129, 2890, 2894, 2922, 2926
AseI ATTAAT 1 cut(s) 3387
Asp700I GAANNNNTTC 2 cut(s) 1734, 3621
AspLEI GCGC 2 cut(s) 87, 4056
AspS9I GGNCC 2 cut(s) 3243, 3961
AsuC2I CCSGG 1 cut(s) 3670
AsuHPI GGTGA 8 cut(s) 95, 238, 1940, 2507, 2749, 2872, 3179, 4403
AvaI CYCGRG 1 cut(s) 4103
AvaII GGWCC 1 cut(s) 3961
BaeGI GKGCMC 1 cut(s) 4422
BaeI ACNNNNGTAYC 2 cut(s) 1359, 1392
BamHI GGATCC 2 cut(s) 343, 1721
BanI GGYRCC 2 cut(s) 264, 3378
BanII GRGCYC 3 cut(s) 1080, 2232, 3786
BauI CACGAG 3 cut(s) 155, 597, 3027
BbrPI CACGTG 1 cut(s) 55
BbsI GAAGAC 7 cut(s) 84, 213, 246, 322, 546, 689, 4173
Bbv12I GWGCWC 6 cut(s) 555, 1080, 3082, 3424, 3786, 4422
BbvCI CCTCAGC 1 cut(s) 3468
BbvI GCAGC 8 cut(s) 452, 2228, 2335, 2368, 2371, 3463, 4133, 4282
BceAI ACGGC 2 cut(s) 3284, 3366
BcgI CGANNNNNNTGC 4 cut(s) 447, 481, 581, 615
BciT130I CCWGG 2 cut(s) 972, 1385
BciVI GTATCC 4 cut(s) 1021, 2003, 2659, 3933
BclI TGATCA 1 cut(s) 3862
BcnI CCSGG 1 cut(s) 3670
BcuI ACTAGT 1 cut(s) 547
BfaI CTAG 9 cut(s) 393, 548, 1199, 1740, 1952, 2015, 2108, 2997, 3899
BfmI CTRYAG 5 cut(s) 194, 1834, 3500, 3733, 4296
BfoI RGCGCY 1 cut(s) 4057
BfrI CTTAAG 1 cut(s) 446
BfuAI ACCTGC 1 cut(s) 3507
BfuI GTATCC 4 cut(s) 1021, 2003, 2659, 3933
BglII AGATCT 2 cut(s) 460, 2919
BisI GCNGC 8 cut(s) 441, 2217, 2324, 2382, 2385, 3477, 4147, 4296
BlsI GCNGC 8 cut(s) 442, 2218, 2325, 2383, 2386, 3478, 4148, 4297
BmcAI AGTACT 1 cut(s) 897
Bme1390I CCNGG 3 cut(s) 972, 1385, 3670
Bme18I GGWCC 1 cut(s) 3961
BmeRI GACNNNNNGTC 1 cut(s) 250
BmeT110I CYCGRG 1 cut(s) 4103
BmgBI CACGTC 3 cut(s) 340, 355, 1219
BmgT120I GGNCC 2 cut(s) 3243, 3961
BmiI GGNNCC 6 cut(s) 266, 345, 1530, 1723, 2255, 3380
BmrFI CCNGG 3 cut(s) 972, 1385, 3670
BpiI GAAGAC 7 cut(s) 84, 213, 246, 322, 546, 689, 4173
BplI GAGNNNNNCTC 2 cut(s) 2430, 2462
BpmI CTGGAG 2 cut(s) 4192, 4423
Bpu10I CCTNAGC 1 cut(s) 3468
BpuMI CCSGG 1 cut(s) 3670
BsaAI YACGTR 2 cut(s) 55, 653
BsaBI GATNNNNATC 1 cut(s) 1991
BsaI GGTCTC 2 cut(s) 2281, 2636
BsaJI CCNNGG 3 cut(s) 3211, 3239, 4228
BsaXI ACNNNNNCTCC 4 cut(s) 2515, 2545, 3498, 3528
Bse118I RCCGGY 2 cut(s) 2290, 3958
Bse3DI GCAATG 7 cut(s) 690, 1153, 1232, 1335, 1666, 2938, 3594
Bse8I GATNNNNATC 1 cut(s) 1991
BseBI CCWGG 2 cut(s) 972, 1385
BseDI CCNNGG 3 cut(s) 3211, 3239, 4228
BseJI GATNNNNATC 1 cut(s) 1991
BseMI GCAATG 7 cut(s) 690, 1153, 1232, 1335, 1666, 2938, 3594
BseMII CTCAG 7 cut(s) 568, 1046, 1538, 1714, 2245, 2276, 3459
BseRI GAGGAG 3 cut(s) 186, 2164, 3569
BseSI GKGCMC 1 cut(s) 4422
BseXI GCAGC 8 cut(s) 452, 2228, 2335, 2368, 2371, 3463, 4133, 4282
BseYI CCCAGC 1 cut(s) 2210
BsgI GTGCAG 2 cut(s) 750, 2451
Bsh1236I CGCG 4 cut(s) 85, 217, 3452, 4273
BshFI GGCC 2 cut(s) 1416, 3245
BshNI GGYRCC 2 cut(s) 264, 3378
BsiHKAI GWGCWC 6 cut(s) 555, 1080, 3082, 3424, 3786, 4422
BsiHKCI CYCGRG 1 cut(s) 4103
BsiSI CCGG 3 cut(s) 2291, 3669, 3959
BsiWI CGTACG 2 cut(s) 137, 649
BslFI GGGAC 2 cut(s) 2699, 3743
BsmBI CGTCTC 1 cut(s) 2138
BsmFI GGGAC 2 cut(s) 2699, 3743
BsmI GAATGC 2 cut(s) 299, 3817
BsnI GGCC 2 cut(s) 1416, 3245
Bso31I GGTCTC 2 cut(s) 2281, 2636
BsoBI CYCGRG 1 cut(s) 4103
Bsp1286I GDGCHC 7 cut(s) 555, 1080, 2232, 3082, 3424, 3786, 4422
Bsp1407I TGTACA 4 cut(s) 2790, 3220, 3591, 3749
Bsp68I TCGCGA 2 cut(s) 3452, 4273
BspACI CCGC 5 cut(s) 217, 1202, 1237, 2858, 3815
BspANI GGCC 2 cut(s) 1416, 3245
BspCNI CTCAG 7 cut(s) 567, 1045, 1537, 1713, 2244, 2277, 3460
BspFNI CGCG 4 cut(s) 85, 217, 3452, 4273
BspHI TCATGA 3 cut(s) 282, 811, 1909
BspLI GGNNCC 6 cut(s) 266, 345, 1530, 1723, 2255, 3380
BspMAI CTGCAG 3 cut(s) 198, 3504, 4300
BspMI ACCTGC 1 cut(s) 3507
BspPI GGATC 9 cut(s) 280, 311, 338, 351, 1716, 1729, 1882, 3692, 4240
BspQI GCTCTTC 1 cut(s) 1085
BspT107I GGYRCC 2 cut(s) 264, 3378
BspTI CTTAAG 1 cut(s) 446
BspTNI GGTCTC 2 cut(s) 2281, 2636
BsrDI GCAATG 7 cut(s) 690, 1153, 1232, 1335, 1666, 2938, 3594
BsrFI RCCGGY 2 cut(s) 2290, 3958
BsrGI TGTACA 4 cut(s) 2790, 3220, 3591, 3749
BssAI RCCGGY 2 cut(s) 2290, 3958
BssECI CCNNGG 3 cut(s) 3211, 3239, 4228
BssSI CACGAG 3 cut(s) 155, 597, 3027
BssT1I CCWWGG 2 cut(s) 3239, 4228
Bst2BI CACGAG 3 cut(s) 155, 597, 3027
Bst2UI CCWGG 2 cut(s) 972, 1385
Bst6I CTCTTC 9 cut(s) 886, 1085, 1331, 1725, 3013, 3189, 3456, 3627, 4209
BstAFI CTTAAG 1 cut(s) 446
BstAPI GCANNNNNTGC 2 cut(s) 2983, 4182
BstAUI TGTACA 4 cut(s) 2790, 3220, 3591, 3749
BstBAI YACGTR 2 cut(s) 55, 653
BstC8I GCNNGC 4 cut(s) 1092, 2012, 3743, 3876
BstEII GGTNACC 1 cut(s) 3162
BstFNI CGCG 4 cut(s) 85, 217, 3452, 4273
BstH2I RGCGCY 1 cut(s) 4057
BstHHI GCGC 2 cut(s) 87, 4056
BstMWI GCNNNNNNNGC 9 cut(s) 17, 193, 1243, 1537, 2216, 2983, 3277, 3473, 4182
BstNI CCWGG 2 cut(s) 972, 1385
BstNSI RCATGY 4 cut(s) 776, 1094, 1853, 3023
BstPI GGTNACC 1 cut(s) 3162
BstSCI CCNGG 3 cut(s) 970, 1383, 3668
BstSFI CTRYAG 5 cut(s) 194, 1834, 3500, 3733, 4296
BstSLI GKGCMC 1 cut(s) 4422
BstSNI TACGTA 1 cut(s) 653
BstUI CGCG 4 cut(s) 85, 217, 3452, 4273
BstV1I GCAGC 8 cut(s) 452, 2228, 2335, 2368, 2371, 3463, 4133, 4282
BstV2I GAAGAC 7 cut(s) 84, 213, 246, 322, 546, 689, 4173
BstX2I RGATCY 7 cut(s) 303, 343, 460, 1721, 1887, 2919, 4232
BstXI CCANNNNNNTGG 1 cut(s) 4200
BstYI RGATCY 7 cut(s) 303, 343, 460, 1721, 1887, 2919, 4232
BsuI GTATCC 4 cut(s) 1021, 2003, 2659, 3933
BsuRI GGCC 2 cut(s) 1416, 3245
BtgZI GCGATG 1 cut(s) 1541
BtrI CACGTC 3 cut(s) 340, 355, 1219
BtsI GCAGTG 3 cut(s) 2981, 3869, 4322
BtsIMutI CAGTG 7 cut(s) 1040, 1811, 1880, 2981, 3869, 4245, 4322
BtuMI TCGCGA 2 cut(s) 3452, 4273
BveI ACCTGC 1 cut(s) 3507
Cac8I GCNNGC 4 cut(s) 1092, 2012, 3743, 3876
CaiI CAGNNNCTG 3 cut(s) 2551, 3508, 4056
CciI TCATGA 3 cut(s) 282, 811, 1909
CfoI GCGC 2 cut(s) 87, 4056
Cfr10I RCCGGY 2 cut(s) 2290, 3958
Cfr13I GGNCC 2 cut(s) 3243, 3961
CseI GACGC 2 cut(s) 240, 2381
CspCI CAANNNNNGTGG 2 cut(s) 1322, 1357
DraI TTTAAA 1 cut(s) 2268
DrdI GACNNNNNNGTC 2 cut(s) 317, 3959
DriI GACNNNNNGTC 1 cut(s) 250
DseDI GACNNNNNNGTC 2 cut(s) 317, 3959
Eam1104I CTCTTC 9 cut(s) 886, 1085, 1331, 1725, 3013, 3189, 3456, 3627, 4209
Eam1105I GACNNNNNGTC 1 cut(s) 250
EarI CTCTTC 9 cut(s) 886, 1085, 1331, 1725, 3013, 3189, 3456, 3627, 4209
Ecl136II GAGCTC 2 cut(s) 1078, 3784
Eco105I TACGTA 1 cut(s) 653
Eco130I CCWWGG 2 cut(s) 3239, 4228
Eco24I GRGCYC 3 cut(s) 1080, 2232, 3786
Eco31I GGTCTC 2 cut(s) 2281, 2636
Eco32I GATATC 4 cut(s) 925, 2354, 3131, 3286
Eco47I GGWCC 1 cut(s) 3961
Eco53kI GAGCTC 2 cut(s) 1078, 3784
Eco57I CTGAAG 5 cut(s) 1066, 1904, 3416, 3662, 4221
Eco72I CACGTG 1 cut(s) 55
Eco88I CYCGRG 1 cut(s) 4103
Eco91I GGTNACC 1 cut(s) 3162
EcoICRI GAGCTC 2 cut(s) 1078, 3784
EcoO65I GGTNACC 1 cut(s) 3162
EcoRI GAATTC 2 cut(s) 2588, 4046
EcoRII CCWGG 2 cut(s) 970, 1383
EcoRV GATATC 4 cut(s) 925, 2354, 3131, 3286
EcoT14I CCWWGG 2 cut(s) 3239, 4228
EcoT22I ATGCAT 4 cut(s) 49, 1096, 1479, 1666
EcoT38I GRGCYC 3 cut(s) 1080, 2232, 3786
ErhI CCWWGG 2 cut(s) 3239, 4228
Esp3I CGTCTC 1 cut(s) 2138
FalI AAGNNNNNCTT 4 cut(s) 3408, 3440, 3597, 3629
FaqI GGGAC 2 cut(s) 2699, 3743
FauI CCCGC 1 cut(s) 1195
FauNDI CATATG 1 cut(s) 43
FbaI TGATCA 1 cut(s) 3862
FblI GTMKAC 3 cut(s) 1149, 1546, 2365
Fnu4HI GCNGC 8 cut(s) 441, 2217, 2324, 2382, 2385, 3477, 4147, 4296
FriOI GRGCYC 3 cut(s) 1080, 2232, 3786
Fsp4HI GCNGC 8 cut(s) 441, 2217, 2324, 2382, 2385, 3477, 4147, 4296
FspBI CTAG 9 cut(s) 393, 548, 1199, 1740, 1952, 2015, 2108, 2997, 3899
GlaI GCGC 2 cut(s) 86, 4055
GluI GCNGC 8 cut(s) 441, 2217, 2324, 2382, 2385, 3477, 4147, 4296
GsaI CCCAGC 1 cut(s) 2214
GsuI CTGGAG 2 cut(s) 4192, 4423
HaeII RGCGCY 1 cut(s) 4057
HaeIII GGCC 2 cut(s) 1416, 3245
HapII CCGG 3 cut(s) 2291, 3669, 3959
HgaI GACGC 2 cut(s) 240, 2381
HhaI GCGC 2 cut(s) 87, 4056
Hin6I GCGC 2 cut(s) 85, 4054
HinP1I GCGC 2 cut(s) 85, 4054
HincII GTYRAC 4 cut(s) 1022, 2366, 2412, 3907
HindII GTYRAC 4 cut(s) 1022, 2366, 2412, 3907
HindIII AAGCTT 4 cut(s) 9, 2810, 4064, 4371
HpaII CCGG 3 cut(s) 2291, 3669, 3959
HphI GGTGA 8 cut(s) 95, 238, 1940, 2507, 2749, 2872, 3179, 4403
Hpy99I CGWCG 2 cut(s) 341, 356
HpyF10VI GCNNNNNNNGC 9 cut(s) 17, 193, 1243, 1537, 2216, 2983, 3277, 3473, 4182
HspAI GCGC 2 cut(s) 85, 4054
Ksp22I TGATCA 1 cut(s) 3862
LguI GCTCTTC 1 cut(s) 1085
LmnI GCTCC 4 cut(s) 1528, 2570, 3419, 4173
Lsp1109I GCAGC 8 cut(s) 452, 2228, 2335, 2368, 2371, 3463, 4133, 4282
MaeI CTAG 9 cut(s) 393, 548, 1199, 1740, 1952, 2015, 2108, 2997, 3899
MfeI CAATTG 1 cut(s) 1449
MflI RGATCY 7 cut(s) 303, 343, 460, 1721, 1887, 2919, 4232
MhlI GDGCHC 7 cut(s) 555, 1080, 2232, 3082, 3424, 3786, 4422
MmeI TCCRAC 5 cut(s) 148, 333, 375, 2093, 3668
Mph1103I ATGCAT 4 cut(s) 49, 1096, 1479, 1666
MroXI GAANNNNTTC 2 cut(s) 1734, 3621
MslI CAYNNNNRTG 3 cut(s) 777, 1217, 1908
MspCI CTTAAG 1 cut(s) 446
MspI CCGG 3 cut(s) 2291, 3669, 3959
MspR9I CCNGG 3 cut(s) 972, 1385, 3670
MunI CAATTG 1 cut(s) 1449
Mva1269I GAATGC 2 cut(s) 299, 3817
MvaI CCWGG 2 cut(s) 972, 1385
MvnI CGCG 4 cut(s) 85, 217, 3452, 4273
MwoI GCNNNNNNNGC 9 cut(s) 17, 193, 1243, 1537, 2216, 2983, 3277, 3473, 4182
NciI CCSGG 1 cut(s) 3670
NdeI CATATG 1 cut(s) 43
NlaIV GGNNCC 6 cut(s) 266, 345, 1530, 1723, 2255, 3380
NmuCI GTSAC 4 cut(s) 504, 1490, 1928, 4000
NruI TCGCGA 2 cut(s) 3452, 4273
NsiI ATGCAT 4 cut(s) 49, 1096, 1479, 1666
NspI RCATGY 4 cut(s) 776, 1094, 1853, 3023
PaeI GCATGC 1 cut(s) 1094
PaeR7I CTCGAG 1 cut(s) 4103
PagI TCATGA 3 cut(s) 282, 811, 1909
PciI ACATGT 3 cut(s) 772, 1849, 3019
PciSI GCTCTTC 1 cut(s) 1085
PcsI WCGNNNNNNNCGW 1 cut(s) 142
PctI GAATGC 2 cut(s) 299, 3817
PdmI GAANNNNTTC 2 cut(s) 1734, 3621
Pfl23II CGTACG 2 cut(s) 137, 649
PfoI TCCNGGA 2 cut(s) 970, 1383
PkrI GCNGC 8 cut(s) 442, 2218, 2325, 2383, 2386, 3478, 4148, 4297
PmaCI CACGTG 1 cut(s) 55
PmlI CACGTG 1 cut(s) 55
Ppu21I YACGTR 2 cut(s) 55, 653
PscI ACATGT 3 cut(s) 772, 1849, 3019
PshBI ATTAAT 1 cut(s) 3387
PsiI TTATAA 4 cut(s) 708, 2772, 3725, 4115
Psp124BI GAGCTC 2 cut(s) 1080, 3786
Psp1406I AACGTT 1 cut(s) 1120
Psp6I CCWGG 2 cut(s) 970, 1383
PspCI CACGTG 1 cut(s) 55
PspEI GGTNACC 1 cut(s) 3162
PspFI CCCAGC 1 cut(s) 2210
PspGI CCWGG 2 cut(s) 970, 1383
PspLI CGTACG 2 cut(s) 137, 649
PspN4I GGNNCC 6 cut(s) 266, 345, 1530, 1723, 2255, 3380
PspPI GGNCC 2 cut(s) 3243, 3961
PspXI VCTCGAGB 1 cut(s) 4103
PsrI GAACNNNNNNTAC 2 cut(s) 888, 920
PstI CTGCAG 3 cut(s) 198, 3504, 4300
PstNI CAGNNNCTG 3 cut(s) 2551, 3508, 4056
PsuI RGATCY 7 cut(s) 303, 343, 460, 1721, 1887, 2919, 4232
RruI TCGCGA 2 cut(s) 3452, 4273
RseI CAYNNNNRTG 3 cut(s) 777, 1217, 1908
SacI GAGCTC 2 cut(s) 1080, 3786
SalI GTCGAC 1 cut(s) 2364
SapI GCTCTTC 1 cut(s) 1085
SatI GCNGC 8 cut(s) 441, 2217, 2324, 2382, 2385, 3477, 4147, 4296
Sau96I GGNCC 2 cut(s) 3243, 3961
ScaI AGTACT 1 cut(s) 897
ScrFI CCNGG 3 cut(s) 972, 1385, 3670
SduI GDGCHC 7 cut(s) 555, 1080, 2232, 3082, 3424, 3786, 4422
SfcI CTRYAG 5 cut(s) 194, 1834, 3500, 3733, 4296
Sfr274I CTCGAG 1 cut(s) 4103
SinI GGWCC 1 cut(s) 3961
SlaI CTCGAG 1 cut(s) 4103
SmiMI CAYNNNNRTG 3 cut(s) 777, 1217, 1908
SnaBI TACGTA 1 cut(s) 653
SpeI ACTAGT 1 cut(s) 547
SphI GCATGC 1 cut(s) 1094
SsiI CCGC 5 cut(s) 217, 1202, 1237, 2858, 3815
SspI AATATT 1 cut(s) 1798
SspMI CTAG 9 cut(s) 393, 548, 1199, 1740, 1952, 2015, 2108, 2997, 3899
SstI GAGCTC 2 cut(s) 1080, 3786
StyD4I CCNGG 3 cut(s) 970, 1383, 3668
StyI CCWWGG 2 cut(s) 3239, 4228
TatI WGTACW 6 cut(s) 57, 895, 2790, 3220, 3591, 3749
TscAI CASTG 7 cut(s) 1040, 1818, 1887, 2988, 3876, 4245, 4322
TseFI GTSAC 4 cut(s) 504, 1490, 1928, 4000
TseI GCWGC 8 cut(s) 440, 2216, 2323, 2381, 2384, 3476, 4146, 4295
Tsp45I GTSAC 4 cut(s) 504, 1490, 1928, 4000
TspGWI ACGGA 7 cut(s) 15, 414, 444, 1764, 2565, 3001, 3867
TspRI CASTG 7 cut(s) 1040, 1818, 1887, 2988, 3876, 4245, 4322
Vha464I CTTAAG 1 cut(s) 446
VneI GTGCAC 1 cut(s) 4418
VpaK11BI GGWCC 1 cut(s) 3961
VspI ATTAAT 1 cut(s) 3387
XbaI TCTAGA 1 cut(s) 1951
XceI RCATGY 4 cut(s) 776, 1094, 1853, 3023
XcmI CCANNNNNNNNNTGG 1 cut(s) 2003
XhoI CTCGAG 1 cut(s) 4103
XmiI GTMKAC 3 cut(s) 1149, 1546, 2365
XmnI GAANNNNTTC 2 cut(s) 1734, 3621
XspI CTAG 9 cut(s) 393, 548, 1199, 1740, 1952, 2015, 2108, 2997, 3899
ZrmI AGTACT 1 cut(s) 897
Zsp2I ATGCAT 4 cut(s) 49, 1096, 1479, 1666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.