Rh4AG014100

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
N/A
Physical Location & Seq
Forward (+)
2652990 .. 2655641
2652 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG014100.1

Sequence Viewer

Length: 405 bp
ATGGATACGCTCCCCCATGATTTGGATACGTTTTCAGGGGTATTTTTGATATTTGGTTATCAACTGAAACCTAAATACCACAGCCACAGCAGCAAGAAGCGCGAAGAAGAGAGCAAGGCGGCCGCGGGTGAGGATATCGAAGCTCCTCCTCCTCCGTCGCCTGTTTTGTTGTCTCCTTCCAATAGTCCGCCTCCTCAGCCGGCCGAGGACGTCGAGGAAGGTGAAATTCTTGAGGACGGTGCCGGTGGTCGCGACGACGGCGTTTTGGAACCGAAAGCGGACTCTGGTGCCGAGTCTGGTGAAATTGAAGCTCCTGGAGTTCGCGAACGTTCTGATAAGCGAAATCTGATGTTTGAATCACCTTATATCAACTGTGGGGCTGGTATCAATTGCGTGTTGGAGTAA

Protein Analysis

134

Amino Acids

14.36

Weight (kDa)

4.45

Isoelectric Point (pI)

75.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 213
AccB1I GGYRCC 2 cut(s) 239, 287
AccB7I CCANNNNNTGG 1 cut(s) 22
AccII CGCG 4 cut(s) 102, 125, 252, 324
AciI CCGC 5 cut(s) 119, 123, 125, 188, 278
AclI AACGTT 1 cut(s) 328
AcoI YGGCCR 2 cut(s) 120, 201
AcsI RAATTY 1 cut(s) 225
AcyI GRCGYC 1 cut(s) 210
AfiI CCNNNNNNNGG 1 cut(s) 22
AgsI TTSAA 2 cut(s) 308, 356
AjnI CCWGG 1 cut(s) 313
AluBI AGCT 2 cut(s) 143, 311
AluI AGCT 2 cut(s) 143, 311
Alw26I GTCTC 1 cut(s) 177
AoxI GGCC 2 cut(s) 120, 201
ApeKI GCWGC 1 cut(s) 90
ApoI RAATTY 1 cut(s) 225
AspLEI GCGC 1 cut(s) 102
AsuHPI GGTGA 4 cut(s) 140, 233, 311, 351
BanI GGYRCC 2 cut(s) 239, 287
BbvCI CCTCAGC 1 cut(s) 195
BbvI GCAGC 1 cut(s) 102
BceAI ACGGC 1 cut(s) 274
BciT130I CCWGG 1 cut(s) 315
BciVI GTATCC 1 cut(s) 19
BcoDI GTCTC 1 cut(s) 177
BfuI GTATCC 1 cut(s) 19
BisI GCNGC 3 cut(s) 91, 120, 123
BlsI GCNGC 3 cut(s) 92, 121, 124
Bme1390I CCNGG 1 cut(s) 315
BmiI GGNNCC 3 cut(s) 241, 270, 289
BmrFI CCNGG 1 cut(s) 315
BpmI CTGGAG 1 cut(s) 336
Bpu10I CCTNAGC 1 cut(s) 195
BpuEI CTTGAG 1 cut(s) 251
BsaHI GRCGYC 1 cut(s) 210
BsaJI CCNNGG 2 cut(s) 123, 204
Bsc4I CCNNNNNNNGG 1 cut(s) 22
Bse118I RCCGGY 2 cut(s) 199, 242
BseBI CCWGG 1 cut(s) 315
BseDI CCNNGG 2 cut(s) 123, 204
BseLI CCNNNNNNNGG 1 cut(s) 22
BseMII CTCAG 1 cut(s) 209
BseRI GAGGAG 4 cut(s) 135, 138, 141, 183
BseX3I CGGCCG 2 cut(s) 120, 201
BseXI GCAGC 1 cut(s) 102
Bsh1236I CGCG 4 cut(s) 102, 125, 252, 324
Bsh1285I CGRYCG 2 cut(s) 123, 204
BshFI GGCC 2 cut(s) 122, 203
BshNI GGYRCC 2 cut(s) 239, 287
BsiEI CGRYCG 2 cut(s) 123, 204
BsiSI CCGG 2 cut(s) 200, 243
BslI CCNNNNNNNGG 1 cut(s) 22
BsmAI GTCTC 1 cut(s) 177
BsnI GGCC 2 cut(s) 122, 203
Bsp68I TCGCGA 2 cut(s) 252, 324
BspACI CCGC 5 cut(s) 119, 123, 125, 188, 278
BspANI GGCC 2 cut(s) 122, 203
BspCNI CTCAG 1 cut(s) 208
BspFNI CGCG 4 cut(s) 102, 125, 252, 324
BspLI GGNNCC 3 cut(s) 241, 270, 289
BspT107I GGYRCC 2 cut(s) 239, 287
BsrFI RCCGGY 2 cut(s) 199, 242
BssAI RCCGGY 2 cut(s) 199, 242
BssECI CCNNGG 2 cut(s) 123, 204
BssNI GRCGYC 1 cut(s) 210
Bst2UI CCWGG 1 cut(s) 315
Bst4CI ACNGT 2 cut(s) 239, 374
Bst6I CTCTTC 1 cut(s) 102
BstACI GRCGYC 1 cut(s) 210
BstC8I GCNNGC 1 cut(s) 201
BstDEI CTNAG 1 cut(s) 195
BstDSI CCRYGG 1 cut(s) 123
BstFNI CGCG 4 cut(s) 102, 125, 252, 324
BstHHI GCGC 1 cut(s) 102
BstMAI GTCTC 1 cut(s) 177
BstMCI CGRYCG 2 cut(s) 123, 204
BstMWI GCNNNNNNNGC 4 cut(s) 90, 99, 196, 258
BstNI CCWGG 1 cut(s) 315
BstSCI CCNGG 1 cut(s) 313
BstUI CGCG 4 cut(s) 102, 125, 252, 324
BstV1I GCAGC 1 cut(s) 102
BstZI CGGCCG 2 cut(s) 120, 201
BsuI GTATCC 1 cut(s) 19
BsuRI GGCC 2 cut(s) 122, 203
BtgI CCRYGG 1 cut(s) 123
BtuMI TCGCGA 2 cut(s) 252, 324
Cac8I GCNNGC 1 cut(s) 201
CciNI GCGGCCGC 1 cut(s) 120
CfoI GCGC 1 cut(s) 102
Cfr10I RCCGGY 2 cut(s) 199, 242
Cfr42I CCGCGG 1 cut(s) 126
CviAII CATG 1 cut(s) 17
CviJI RGCY 7 cut(s) 84, 122, 143, 199, 203, 311, 380
CviKI_1 RGCY 7 cut(s) 84, 122, 143, 199, 203, 311, 380
DdeI CTNAG 1 cut(s) 195
EaeI YGGCCR 2 cut(s) 120, 201
EagI CGGCCG 2 cut(s) 120, 201
Eam1104I CTCTTC 1 cut(s) 102
EarI CTCTTC 1 cut(s) 102
EciI GGCGGA 1 cut(s) 177
EclXI CGGCCG 2 cut(s) 120, 201
Eco32I GATATC 1 cut(s) 136
Eco52I CGGCCG 2 cut(s) 120, 201
EcoRII CCWGG 1 cut(s) 313
EcoRV GATATC 1 cut(s) 136
FaeI CATG 1 cut(s) 20
FaiI YATR 2 cut(s) 18, 366
FatI CATG 1 cut(s) 16
FauI CCCGC 1 cut(s) 118
Fnu4HI GCNGC 3 cut(s) 91, 120, 123
Fsp4HI GCNGC 3 cut(s) 91, 120, 123
GlaI GCGC 1 cut(s) 101
GluI GCNGC 3 cut(s) 91, 120, 123
GsuI CTGGAG 1 cut(s) 336
HaeIII GGCC 2 cut(s) 122, 203
HapII CCGG 2 cut(s) 200, 243
HhaI GCGC 1 cut(s) 102
Hin1I GRCGYC 1 cut(s) 210
Hin1II CATG 1 cut(s) 20
Hin6I GCGC 1 cut(s) 100
HinP1I GCGC 1 cut(s) 100
HinfI GANTC 3 cut(s) 281, 293, 356
HpaII CCGG 2 cut(s) 200, 243
HphI GGTGA 4 cut(s) 140, 233, 311, 351
Hpy188I TCNGA 2 cut(s) 334, 348
Hpy188III TCNNGA 3 cut(s) 230, 251, 323
Hpy99I CGWCG 4 cut(s) 160, 215, 257, 260
HpyAV CCTTC 2 cut(s) 186, 212
HpyCH4III ACNGT 2 cut(s) 239, 374
HpyCH4IV ACGT 3 cut(s) 29, 210, 328
HpyF10VI GCNNNNNNNGC 4 cut(s) 90, 99, 196, 258
HpyF3I CTNAG 1 cut(s) 195
HpySE526I ACGT 3 cut(s) 29, 210, 328
Hsp92I GRCGYC 1 cut(s) 210
Hsp92II CATG 1 cut(s) 20
HspAI GCGC 1 cut(s) 100
KroI GCCGGC 1 cut(s) 199
KroNI GCCGGC 1 cut(s) 201
KspI CCGCGG 1 cut(s) 126
LmnI GCTCC 3 cut(s) 15, 148, 316
LpnPI CCDG 9 cut(s) 21, 174, 213, 256, 270, 282, 300, 327, 366
Lsp1109I GCAGC 1 cut(s) 102
MaeII ACGT 3 cut(s) 29, 210, 328
MboII GAAGA 2 cut(s) 116, 119
MfeI CAATTG 1 cut(s) 388
MluCI AATT 3 cut(s) 225, 303, 388
MlyI GAGTC 2 cut(s) 275, 302
MmeI TCCRAC 1 cut(s) 378
MnlI CCTC 9 cut(s) 124, 156, 159, 162, 199, 201, 204, 208, 226
MroNI GCCGGC 1 cut(s) 199
MspA1I CMGCKG 1 cut(s) 125
MspI CCGG 2 cut(s) 200, 243
MspR9I CCNGG 1 cut(s) 315
MunI CAATTG 1 cut(s) 388
MvaI CCWGG 1 cut(s) 315
MvnI CGCG 4 cut(s) 102, 125, 252, 324
MwoI GCNNNNNNNGC 4 cut(s) 90, 99, 196, 258
NaeI GCCGGC 1 cut(s) 201
NgoMIV GCCGGC 1 cut(s) 199
NlaIII CATG 1 cut(s) 20
NlaIV GGNNCC 3 cut(s) 241, 270, 289
NmeAIII GCCGAG 2 cut(s) 229, 316
NotI GCGGCCGC 1 cut(s) 120
NruI TCGCGA 2 cut(s) 252, 324
PdiI GCCGGC 1 cut(s) 201
PfeI GAWTC 1 cut(s) 356
PflMI CCANNNNNTGG 1 cut(s) 22
PfoI TCCNGGA 1 cut(s) 313
PkrI GCNGC 3 cut(s) 92, 121, 124
PleI GAGTC 2 cut(s) 275, 301
PpsI GAGTC 2 cut(s) 275, 301
Psp1406I AACGTT 1 cut(s) 328
Psp6I CCWGG 1 cut(s) 313
PspGI CCWGG 1 cut(s) 313
PspN4I GGNNCC 3 cut(s) 241, 270, 289
RruI TCGCGA 2 cut(s) 252, 324
SacII CCGCGG 1 cut(s) 126
SatI GCNGC 3 cut(s) 91, 120, 123
SchI GAGTC 2 cut(s) 275, 302
ScrFI CCNGG 1 cut(s) 315
SetI ASST 8 cut(s) 32, 73, 145, 213, 223, 313, 331, 364
Sfr303I CCGCGG 1 cut(s) 126
SgrBI CCGCGG 1 cut(s) 126
SmlI CTYRAG 1 cut(s) 230
SmoI CTYRAG 1 cut(s) 230
Sse9I AATT 3 cut(s) 225, 303, 388
SsiI CCGC 5 cut(s) 119, 123, 125, 188, 278
StyD4I CCNGG 1 cut(s) 313
TaaI ACNGT 2 cut(s) 239, 374
TaiI ACGT 3 cut(s) 32, 213, 331
TaqI TCGA 2 cut(s) 138, 213
TasI AATT 3 cut(s) 225, 303, 388
TauI GCSGC 2 cut(s) 122, 125
TfiI GAWTC 1 cut(s) 356
TseI GCWGC 1 cut(s) 90
TspGWI ACGGA 1 cut(s) 144
Van91I CCANNNNNTGG 1 cut(s) 22
XapI RAATTY 1 cut(s) 225
ZraI GACGTC 1 cut(s) 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.