Rh4AG123300

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
N/A
Physical Location & Seq
Forward (+)
26616062 .. 26616959
898 bp
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UTR
Exon/CDS
Intron
Rh4AG123300.1

Sequence Viewer

Length: 222 bp
ATGTCACGCCCCGCTCTATGCACATGTGCGCCAGCAACCAGGCCAAGCATGCGACAAGTGATGCAGTATTTGGAGGGTGATATTGCTCTTCCGGAGTTGTCACTTCTTCGGCTCTATTCAAGTGGTTTAGCATTTGCGAATGATGAAGGTTCTGATGATGTTGAACTGGCATATCAGTGTTCATATGTTCCAGAGTCGACTCTCCTATCAGGTGGTCGCTGA

Protein Analysis

73

Amino Acids

7.92

Weight (kDa)

4.4

Isoelectric Point (pI)

55.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 14
AccI GTMKAC 1 cut(s) 197
AccIII TCCGGA 1 cut(s) 91
AciI CCGC 1 cut(s) 12
AflIII ACRYGT 1 cut(s) 23
AgsI TTSAA 2 cut(s) 120, 164
AjnI CCWGG 1 cut(s) 38
Aor13HI TCCGGA 1 cut(s) 91
AoxI GGCC 1 cut(s) 41
AspLEI GCGC 1 cut(s) 31
AsuHPI GGTGA 1 cut(s) 89
BciT130I CCWGG 1 cut(s) 40
Bme1390I CCNGG 1 cut(s) 40
BmrFI CCNGG 1 cut(s) 40
BmsI GCATC 1 cut(s) 51
BsaWI WCCGGW 1 cut(s) 91
Bse1I ACTGG 1 cut(s) 171
BseAI TCCGGA 1 cut(s) 91
BseBI CCWGG 1 cut(s) 40
BseNI ACTGG 1 cut(s) 171
BshFI GGCC 1 cut(s) 43
BsiSI CCGG 1 cut(s) 92
BsnI GGCC 1 cut(s) 43
Bsp13I TCCGGA 1 cut(s) 91
BspACI CCGC 1 cut(s) 12
BspANI GGCC 1 cut(s) 43
BspEI TCCGGA 1 cut(s) 91
BspQI GCTCTTC 1 cut(s) 93
BsrBI CCGCTC 1 cut(s) 14
BsrI ACTGG 1 cut(s) 171
Bst2UI CCWGG 1 cut(s) 40
Bst6I CTCTTC 1 cut(s) 93
BstC8I GCNNGC 2 cut(s) 33, 50
BstHHI GCGC 1 cut(s) 31
BstMWI GCNNNNNNNGC 1 cut(s) 49
BstNI CCWGG 1 cut(s) 40
BstNSI RCATGY 2 cut(s) 27, 52
BstSCI CCNGG 1 cut(s) 38
BsuRI GGCC 1 cut(s) 43
BtsIMutI CAGTG 1 cut(s) 182
Cac8I GCNNGC 2 cut(s) 33, 50
CfoI GCGC 1 cut(s) 31
CviAII CATG 2 cut(s) 24, 49
CviJI RGCY 2 cut(s) 43, 112
CviKI_1 RGCY 2 cut(s) 43, 112
Eam1104I CTCTTC 1 cut(s) 93
EarI CTCTTC 1 cut(s) 93
EcoRII CCWGG 1 cut(s) 38
FaeI CATG 2 cut(s) 27, 52
FaiI YATR 6 cut(s) 19, 25, 50, 172, 184, 186
FatI CATG 2 cut(s) 23, 48
FauI CCCGC 1 cut(s) 19
FauNDI CATATG 1 cut(s) 184
FblI GTMKAC 1 cut(s) 197
GlaI GCGC 1 cut(s) 30
HaeIII GGCC 1 cut(s) 43
HapII CCGG 1 cut(s) 92
HhaI GCGC 1 cut(s) 31
Hin1II CATG 2 cut(s) 27, 52
Hin6I GCGC 1 cut(s) 29
HinP1I GCGC 1 cut(s) 29
HincII GTYRAC 1 cut(s) 198
HindII GTYRAC 1 cut(s) 198
HinfI GANTC 2 cut(s) 194, 199
HpaII CCGG 1 cut(s) 92
HphI GGTGA 1 cut(s) 89
Hpy166II GTNNAC 1 cut(s) 198
Hpy188I TCNGA 1 cut(s) 154
Hpy188III TCNNGA 2 cut(s) 92, 191
Hpy8I GTNNAC 1 cut(s) 198
HpyAV CCTTC 1 cut(s) 140
HpyCH4V TGCA 2 cut(s) 21, 64
HpyF10VI GCNNNNNNNGC 1 cut(s) 49
Hsp92II CATG 2 cut(s) 27, 52
HspAI GCGC 1 cut(s) 29
Kpn2I TCCGGA 1 cut(s) 91
LguI GCTCTTC 1 cut(s) 93
LpnPI CCDG 7 cut(s) 25, 45, 52, 105, 152, 195, 204
LweI GCATC 1 cut(s) 51
MaeIII GTNAC 2 cut(s) 3, 99
MbiI CCGCTC 1 cut(s) 14
MboII GAAGA 2 cut(s) 80, 98
MlyI GAGTC 2 cut(s) 193, 203
MnlI CCTC 1 cut(s) 67
MroI TCCGGA 1 cut(s) 91
MslI CAYNNNNRTG 1 cut(s) 175
MspI CCGG 1 cut(s) 92
MspR9I CCNGG 1 cut(s) 40
MvaI CCWGG 1 cut(s) 40
MwoI GCNNNNNNNGC 1 cut(s) 49
NdeI CATATG 1 cut(s) 184
NlaIII CATG 2 cut(s) 27, 52
NmuCI GTSAC 2 cut(s) 3, 99
NspI RCATGY 2 cut(s) 27, 52
PaeI GCATGC 1 cut(s) 52
PciI ACATGT 1 cut(s) 23
PciSI GCTCTTC 1 cut(s) 93
PleI GAGTC 2 cut(s) 193, 202
PpsI GAGTC 2 cut(s) 193, 202
PscI ACATGT 1 cut(s) 23
Psp6I CCWGG 1 cut(s) 38
PspGI CCWGG 1 cut(s) 38
RseI CAYNNNNRTG 1 cut(s) 175
SalI GTCGAC 1 cut(s) 196
SapI GCTCTTC 1 cut(s) 93
SchI GAGTC 2 cut(s) 193, 203
ScrFI CCNGG 1 cut(s) 40
SetI ASST 2 cut(s) 151, 214
SfaNI GCATC 1 cut(s) 51
SmiMI CAYNNNNRTG 1 cut(s) 175
SphI GCATGC 1 cut(s) 52
SsiI CCGC 1 cut(s) 12
StyD4I CCNGG 1 cut(s) 38
TaqI TCGA 1 cut(s) 197
TscAI CASTG 1 cut(s) 182
TseFI GTSAC 2 cut(s) 3, 99
Tsp45I GTSAC 2 cut(s) 3, 99
TspDTI ATGAA 2 cut(s) 159, 171
TspRI CASTG 1 cut(s) 182
XceI RCATGY 2 cut(s) 27, 52
XmiI GTMKAC 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.