Rh4AG150900
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
N/A
Physical Location & Seq
Reverse (-)
38184629 .. 38185597
969 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG150900.1

Sequence Viewer

Length: 300 bp
ATGTCCAACTTCTCAAACCAACTTGTATCACTGAGACTGGGAAGAAACCAATTATCTGGAAGCTTCCCTACGGGAATATTTGAGAACCTTGTTAATCTGACAGAAATGATGATGGAGAAGAACAATTTCAGTGGTGGGATTCCTGCCATTATTGGTAACCTCTGGATGCTGCGGCGATTAGATGTATCTGCAAACGAGTTTTCTGGCCAAATTCCATCATCCATAGCCAATATGAGTCAATTTTATTTATCTGTTAAGGAAGGCCAAAACACCACCCTCTACAGAAGCTTCACCAACTAA

Protein Analysis

99

Amino Acids

11.07

Weight (kDa)

8.19

Isoelectric Point (pI)

40.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 172
AcoI YGGCCR 1 cut(s) 205
AcsI RAATTY 1 cut(s) 210
AluBI AGCT 2 cut(s) 63, 288
AluI AGCT 2 cut(s) 63, 288
Alw26I GTCTC 1 cut(s) 28
AoxI GGCC 2 cut(s) 205, 262
ApeKI GCWGC 1 cut(s) 169
ApoI RAATTY 1 cut(s) 210
Asp700I GAANNNNTTC 1 cut(s) 125
AsuHPI GGTGA 1 cut(s) 283
BalI TGGCCA 1 cut(s) 207
BarI GAAGNNNNNNTAC 2 cut(s) 52, 84
BbvI GCAGC 1 cut(s) 156
BccI CCATC 2 cut(s) 106, 223
BcoDI GTCTC 1 cut(s) 28
BfmI CTRYAG 1 cut(s) 280
BisI GCNGC 2 cut(s) 170, 173
BlsI GCNGC 2 cut(s) 171, 174
BmrI ACTGGG 1 cut(s) 47
BmsI GCATC 1 cut(s) 156
BmuI ACTGGG 1 cut(s) 47
Bse1I ACTGG 1 cut(s) 42
BseGI GGATG 2 cut(s) 171, 218
BseMII CTCAG 1 cut(s) 23
BseNI ACTGG 1 cut(s) 42
BseXI GCAGC 1 cut(s) 156
BshFI GGCC 2 cut(s) 207, 264
BsmAI GTCTC 1 cut(s) 28
BsnI GGCC 2 cut(s) 207, 264
BspACI CCGC 1 cut(s) 172
BspANI GGCC 2 cut(s) 207, 264
BspCNI CTCAG 1 cut(s) 24
BsrI ACTGG 1 cut(s) 42
BstDEI CTNAG 1 cut(s) 32
BstEII GGTNACC 1 cut(s) 155
BstF5I GGATG 2 cut(s) 171, 218
BstMAI GTCTC 1 cut(s) 28
BstPI GGTNACC 1 cut(s) 155
BstSFI CTRYAG 1 cut(s) 280
BstV1I GCAGC 1 cut(s) 156
BstXI CCANNNNNNTGG 1 cut(s) 56
BsuRI GGCC 2 cut(s) 207, 264
BtsCI GGATG 2 cut(s) 171, 218
BtsIMutI CAGTG 2 cut(s) 29, 136
CspCI CAANNNNNGTGG 2 cut(s) 112, 147
CviJI RGCY 5 cut(s) 63, 207, 227, 264, 288
CviKI_1 RGCY 5 cut(s) 63, 207, 227, 264, 288
DdeI CTNAG 1 cut(s) 32
EaeI YGGCCR 1 cut(s) 205
Eco91I GGTNACC 1 cut(s) 155
EcoO65I GGTNACC 1 cut(s) 155
FaiI YATR 2 cut(s) 224, 233
Fnu4HI GCNGC 2 cut(s) 170, 173
FokI GGATG 2 cut(s) 178, 205
Fsp4HI GCNGC 2 cut(s) 170, 173
GluI GCNGC 2 cut(s) 170, 173
HaeIII GGCC 2 cut(s) 207, 264
HindIII AAGCTT 2 cut(s) 61, 286
HinfI GANTC 2 cut(s) 139, 235
HphI GGTGA 1 cut(s) 283
Hpy188I TCNGA 1 cut(s) 99
Hpy188III TCNNGA 2 cut(s) 57, 163
HpyAV CCTTC 1 cut(s) 254
HpyCH4V TGCA 1 cut(s) 191
HpyF3I CTNAG 1 cut(s) 32
LpnPI CCDG 5 cut(s) 23, 42, 148, 156, 189
Lsp1109I GCAGC 1 cut(s) 156
LweI GCATC 1 cut(s) 156
MaeIII GTNAC 1 cut(s) 155
MboII GAAGA 2 cut(s) 54, 130
MlsI TGGCCA 1 cut(s) 207
MluCI AATT 4 cut(s) 50, 124, 210, 239
MluNI TGGCCA 1 cut(s) 207
MlyI GAGTC 1 cut(s) 244
MmeI TCCRAC 1 cut(s) 30
MnlI CCTC 2 cut(s) 170, 287
Mox20I TGGCCA 1 cut(s) 207
MroXI GAANNNNTTC 1 cut(s) 125
MscI TGGCCA 1 cut(s) 207
MseI TTAA 2 cut(s) 93, 255
Msp20I TGGCCA 1 cut(s) 207
PdmI GAANNNNTTC 1 cut(s) 125
PfeI GAWTC 1 cut(s) 139
PkrI GCNGC 2 cut(s) 171, 174
PleI GAGTC 1 cut(s) 243
PpsI GAGTC 1 cut(s) 243
PspEI GGTNACC 1 cut(s) 155
SaqAI TTAA 2 cut(s) 93, 255
SatI GCNGC 2 cut(s) 170, 173
SchI GAGTC 1 cut(s) 244
SetI ASST 4 cut(s) 65, 90, 162, 290
SfaNI GCATC 1 cut(s) 156
SfcI CTRYAG 1 cut(s) 280
SgeI CNNG 9 cut(s) 35, 50, 69, 84, 101, 155, 175, 208, 216
Sse9I AATT 4 cut(s) 50, 124, 210, 239
SsiI CCGC 1 cut(s) 172
SspI AATATT 1 cut(s) 78
TasI AATT 4 cut(s) 50, 124, 210, 239
TauI GCSGC 1 cut(s) 175
TfiI GAWTC 1 cut(s) 139
Tru1I TTAA 2 cut(s) 93, 255
Tru9I TTAA 2 cut(s) 93, 255
TscAI CASTG 2 cut(s) 36, 136
TseI GCWGC 1 cut(s) 169
TspRI CASTG 2 cut(s) 36, 136
XapI RAATTY 1 cut(s) 210
XmnI GAANNNNTTC 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.