Rh4AG258100

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
N/A
Physical Location & Seq
Forward (+)
57374851 .. 57377056
2206 bp
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UTR
Exon/CDS
Intron
Rh4AG258100.1

Sequence Viewer

Length: 360 bp
ATGTTGACTTCAGATGATCTAGCTTCCTCTGTTGTGGGAACTCCGAGTTATATGTGCCCTGAGCTTCTTGCCGACATACCATATGGTTCTAAGTCAGATATTTGGTCTCTAGGGTGCTGTATATATGAAATGGCCGCTCACAAGCCAGCATTTAAAGCCTTTGATATACAATCTTTGATCAACAAAATCAACAAGTCAATAGTGGCTCCACTTCCAACGGTTTACTGCTGTGCATTTCGAGGTCTTGTTAAAAGCATGCTGTGCAAAAATCCAGAACTTAGACCAAGTGTAAGTTATCTATTTTGCTTTCTTGACAATATATTCTTTTATTGGTACCTGCATGTAATACCAGGTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

119

Amino Acids

13.35

Weight (kDa)

6.79

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 6 - 99 1.4e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 15 - 101 6.7e-09 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 345
Acc65I GGTACC 1 cut(s) 333
AccB1I GGYRCC 1 cut(s) 333
AccBSI CCGCTC 1 cut(s) 137
AciI CCGC 1 cut(s) 135
AcoI YGGCCR 1 cut(s) 132
AfaI GTAC 1 cut(s) 335
AjnI CCWGG 1 cut(s) 349
AluBI AGCT 2 cut(s) 23, 64
AluI AGCT 2 cut(s) 23, 64
Alw26I GTCTC 1 cut(s) 111
AoxI GGCC 1 cut(s) 132
Asp718I GGTACC 1 cut(s) 333
BaeGI GKGCMC 1 cut(s) 59
BanI GGYRCC 1 cut(s) 333
BciT130I CCWGG 1 cut(s) 351
BclI TGATCA 1 cut(s) 177
BcoDI GTCTC 1 cut(s) 111
BfaI CTAG 2 cut(s) 20, 110
BfuAI ACCTGC 1 cut(s) 345
BisI GCNGC 1 cut(s) 135
BlsI GCNGC 1 cut(s) 136
Bme1390I CCNGG 1 cut(s) 351
BmiI GGNNCC 2 cut(s) 207, 335
BmrFI CCNGG 1 cut(s) 351
Bpu10I CCTNAGC 1 cut(s) 60
BsaI GGTCTC 1 cut(s) 111
BseBI CCWGG 1 cut(s) 351
BseMII CTCAG 1 cut(s) 51
BseSI GKGCMC 1 cut(s) 59
BshFI GGCC 1 cut(s) 134
BshNI GGYRCC 1 cut(s) 333
BsmAI GTCTC 1 cut(s) 111
BsnI GGCC 1 cut(s) 134
Bso31I GGTCTC 1 cut(s) 111
Bsp1286I GDGCHC 1 cut(s) 59
Bsp143I GATC 2 cut(s) 16, 177
BspACI CCGC 1 cut(s) 135
BspANI GGCC 1 cut(s) 134
BspCNI CTCAG 1 cut(s) 52
BspLI GGNNCC 2 cut(s) 207, 335
BspMI ACCTGC 1 cut(s) 345
BspT107I GGYRCC 1 cut(s) 333
BspTNI GGTCTC 1 cut(s) 111
BsrBI CCGCTC 1 cut(s) 137
BssMI GATC 2 cut(s) 16, 177
Bst2UI CCWGG 1 cut(s) 351
Bst4CI ACNGT 1 cut(s) 220
BstAPI GCANNNNNTGC 1 cut(s) 261
BstC8I GCNNGC 2 cut(s) 147, 257
BstDEI CTNAG 3 cut(s) 60, 90, 278
BstKTI GATC 2 cut(s) 19, 180
BstMAI GTCTC 1 cut(s) 111
BstMBI GATC 2 cut(s) 16, 177
BstMWI GCNNNNNNNGC 2 cut(s) 155, 261
BstNI CCWGG 1 cut(s) 351
BstNSI RCATGY 2 cut(s) 259, 344
BstSCI CCNGG 1 cut(s) 349
BstSLI GKGCMC 1 cut(s) 59
BsuRI GGCC 1 cut(s) 134
BveI ACCTGC 1 cut(s) 345
Cac8I GCNNGC 2 cut(s) 147, 257
CsiI ACCWGGT 1 cut(s) 349
Csp6I GTAC 1 cut(s) 334
CviAII CATG 2 cut(s) 256, 341
CviJI RGCY 6 cut(s) 23, 64, 134, 145, 158, 206
CviKI_1 RGCY 6 cut(s) 23, 64, 134, 145, 158, 206
CviQI GTAC 1 cut(s) 334
DdeI CTNAG 3 cut(s) 60, 90, 278
DpnI GATC 2 cut(s) 18, 179
DpnII GATC 2 cut(s) 16, 177
DraI TTTAAA 1 cut(s) 154
EaeI YGGCCR 1 cut(s) 132
Eco31I GGTCTC 1 cut(s) 111
EcoRII CCWGG 1 cut(s) 349
FaeI CATG 2 cut(s) 259, 344
FatI CATG 2 cut(s) 255, 340
FauNDI CATATG 1 cut(s) 82
FbaI TGATCA 1 cut(s) 177
Fnu4HI GCNGC 1 cut(s) 135
Fsp4HI GCNGC 1 cut(s) 135
FspBI CTAG 2 cut(s) 20, 110
GluI GCNGC 1 cut(s) 135
HaeIII GGCC 1 cut(s) 134
Hin1II CATG 2 cut(s) 259, 344
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
Hpy166II GTNNAC 2 cut(s) 6, 223
Hpy188I TCNGA 3 cut(s) 13, 45, 97
Hpy188III TCNNGA 2 cut(s) 272, 311
Hpy8I GTNNAC 2 cut(s) 6, 223
HpyCH4III ACNGT 1 cut(s) 220
HpyCH4V TGCA 3 cut(s) 233, 264, 340
HpyF10VI GCNNNNNNNGC 2 cut(s) 155, 261
HpyF3I CTNAG 3 cut(s) 60, 90, 278
Hsp92II CATG 2 cut(s) 259, 344
KpnI GGTACC 1 cut(s) 337
Ksp22I TGATCA 1 cut(s) 177
Kzo9I GATC 2 cut(s) 16, 177
LmnI GCTCC 1 cut(s) 211
LpnPI CCDG 5 cut(s) 72, 159, 285, 336, 350
MabI ACCWGGT 1 cut(s) 349
MaeI CTAG 2 cut(s) 20, 110
MalI GATC 2 cut(s) 18, 179
MbiI CCGCTC 1 cut(s) 137
MboI GATC 2 cut(s) 16, 177
MhlI GDGCHC 1 cut(s) 59
MmeI TCCRAC 1 cut(s) 239
MnlI CCTC 2 cut(s) 37, 233
MseI TTAA 2 cut(s) 153, 249
MspR9I CCNGG 1 cut(s) 351
MvaI CCWGG 1 cut(s) 351
MwoI GCNNNNNNNGC 2 cut(s) 155, 261
NdeI CATATG 1 cut(s) 82
NdeII GATC 2 cut(s) 16, 177
NlaIII CATG 2 cut(s) 259, 344
NlaIV GGNNCC 2 cut(s) 207, 335
NspI RCATGY 2 cut(s) 259, 344
PaeI GCATGC 1 cut(s) 259
PkrI GCNGC 1 cut(s) 136
Psp6I CCWGG 1 cut(s) 349
PspGI CCWGG 1 cut(s) 349
PspN4I GGNNCC 2 cut(s) 207, 335
RsaI GTAC 1 cut(s) 335
RsaNI GTAC 1 cut(s) 334
SaqAI TTAA 2 cut(s) 153, 249
SatI GCNGC 1 cut(s) 135
Sau3AI GATC 2 cut(s) 16, 177
ScrFI CCNGG 1 cut(s) 351
SduI GDGCHC 1 cut(s) 59
SetI ASST 5 cut(s) 25, 66, 244, 339, 355
SexAI ACCWGGT 1 cut(s) 349
SphI GCATGC 1 cut(s) 259
SsiI CCGC 1 cut(s) 135
SspMI CTAG 2 cut(s) 20, 110
StyD4I CCNGG 1 cut(s) 349
TaaI ACNGT 1 cut(s) 220
TaqI TCGA 1 cut(s) 238
TauI GCSGC 1 cut(s) 137
Tru1I TTAA 2 cut(s) 153, 249
Tru9I TTAA 2 cut(s) 153, 249
TspDTI ATGAA 1 cut(s) 141
XceI RCATGY 2 cut(s) 259, 344
XspI CTAG 2 cut(s) 20, 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.