Rh4BG124700
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
N/A
Physical Location & Seq
Reverse (-)
20924834 .. 20925133
300 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG124700.1

Sequence Viewer

Length: 300 bp
ATGCTGCAAGTGGCTTTGCTATGCACTCAATACCTACCAGCTCACCGCCCCAAGATGTCGGAAGTTGTCCGGATGCTTGAAGGCGATGGACTAGCGGAGAAGTGGGCTGCGTCACATAATCATAGTAAATCCAACATGGACCTCTTCCATACTCACAACAGTAGCAAAAGCACTCCCCACAGTACTTGGAATGCATCGAAACATGATGGCAGTGAACGCATGTTTGGCACATCTATGGATGAGGATGATGATGAGCATTCCTTGGATTCCTATGCCATGGAACTCTCCGGTCCCAGATAG

Protein Analysis

99

Amino Acids

11.14

Weight (kDa)

5.65

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 69
AciI CCGC 2 cut(s) 46, 95
AfaI GTAC 1 cut(s) 184
AgsI TTSAA 1 cut(s) 80
AjuI GAANNNNNNNTTGG 2 cut(s) 207, 239
AluBI AGCT 1 cut(s) 41
AluI AGCT 1 cut(s) 41
Aor13HI TCCGGA 1 cut(s) 69
ApeKI GCWGC 2 cut(s) 4, 107
AspS9I GGNCC 2 cut(s) 139, 290
AsuHPI GGTGA 1 cut(s) 35
AvaII GGWCC 2 cut(s) 139, 290
BbvI GCAGC 1 cut(s) 94
BccI CCATC 2 cut(s) 80, 200
BfaI CTAG 1 cut(s) 92
BisI GCNGC 2 cut(s) 5, 108
BlsI GCNGC 2 cut(s) 6, 109
BmcAI AGTACT 1 cut(s) 184
Bme18I GGWCC 2 cut(s) 139, 290
BmgT120I GGNCC 2 cut(s) 139, 290
BmiI GGNNCC 1 cut(s) 292
BmsI GCATC 2 cut(s) 63, 203
BsaJI CCNNGG 2 cut(s) 261, 276
BsaWI WCCGGW 2 cut(s) 69, 287
BseAI TCCGGA 1 cut(s) 69
BseDI CCNNGG 2 cut(s) 261, 276
BseGI GGATG 3 cut(s) 78, 244, 250
BseXI GCAGC 1 cut(s) 94
BsiSI CCGG 2 cut(s) 70, 288
BslFI GGGAC 1 cut(s) 276
BsmFI GGGAC 1 cut(s) 276
BsmI GAATGC 2 cut(s) 196, 256
Bsp13I TCCGGA 1 cut(s) 69
Bsp19I CCATGG 1 cut(s) 276
BspACI CCGC 2 cut(s) 46, 95
BspEI TCCGGA 1 cut(s) 69
BspLI GGNNCC 1 cut(s) 292
BssECI CCNNGG 2 cut(s) 261, 276
BssT1I CCWWGG 2 cut(s) 261, 276
Bst4CI ACNGT 2 cut(s) 161, 182
Bst6I CTCTTC 1 cut(s) 149
BstDSI CCRYGG 1 cut(s) 276
BstF5I GGATG 3 cut(s) 78, 244, 250
BstMWI GCNNNNNNNGC 2 cut(s) 216, 225
BstNSI RCATGY 1 cut(s) 223
BstV1I GCAGC 1 cut(s) 94
BtgI CCRYGG 1 cut(s) 276
BtgZI GCGATG 1 cut(s) 99
BtsCI GGATG 3 cut(s) 78, 244, 250
BtsI GCAGTG 1 cut(s) 217
BtsIMutI CAGTG 1 cut(s) 217
Cfr13I GGNCC 2 cut(s) 139, 290
CseI GACGC 1 cut(s) 99
Csp6I GTAC 1 cut(s) 183
CspCI CAANNNNNGTGG 2 cut(s) 167, 202
CviAII CATG 4 cut(s) 136, 203, 220, 277
CviJI RGCY 3 cut(s) 14, 41, 107
CviKI_1 RGCY 3 cut(s) 14, 41, 107
CviQI GTAC 1 cut(s) 183
Eam1104I CTCTTC 1 cut(s) 149
EarI CTCTTC 1 cut(s) 149
Eco130I CCWWGG 2 cut(s) 261, 276
Eco47I GGWCC 2 cut(s) 139, 290
EcoT14I CCWWGG 2 cut(s) 261, 276
EcoT22I ATGCAT 1 cut(s) 196
ErhI CCWWGG 2 cut(s) 261, 276
FaeI CATG 4 cut(s) 139, 206, 223, 280
FaqI GGGAC 1 cut(s) 276
FatI CATG 4 cut(s) 135, 202, 219, 276
Fnu4HI GCNGC 2 cut(s) 5, 108
FokI GGATG 3 cut(s) 85, 251, 257
Fsp4HI GCNGC 2 cut(s) 5, 108
FspBI CTAG 1 cut(s) 92
GluI GCNGC 2 cut(s) 5, 108
HapII CCGG 2 cut(s) 70, 288
HgaI GACGC 1 cut(s) 99
Hin1II CATG 4 cut(s) 139, 206, 223, 280
HinfI GANTC 1 cut(s) 266
HpaII CCGG 2 cut(s) 70, 288
HphI GGTGA 1 cut(s) 35
Hpy166II GTNNAC 1 cut(s) 215
Hpy188I TCNGA 1 cut(s) 61
Hpy188III TCNNGA 1 cut(s) 70
Hpy8I GTNNAC 1 cut(s) 215
HpyAV CCTTC 1 cut(s) 74
HpyCH4III ACNGT 2 cut(s) 161, 182
HpyCH4V TGCA 3 cut(s) 7, 24, 194
HpyF10VI GCNNNNNNNGC 2 cut(s) 216, 225
Hsp92II CATG 4 cut(s) 139, 206, 223, 280
Kpn2I TCCGGA 1 cut(s) 69
LpnPI CCDG 2 cut(s) 51, 83
Lsp1109I GCAGC 1 cut(s) 94
LweI GCATC 2 cut(s) 63, 203
MaeI CTAG 1 cut(s) 92
MaeIII GTNAC 1 cut(s) 111
MboII GAAGA 1 cut(s) 136
MmeI TCCRAC 2 cut(s) 39, 156
MnlI CCTC 2 cut(s) 152, 235
Mph1103I ATGCAT 1 cut(s) 196
MroI TCCGGA 1 cut(s) 69
MslI CAYNNNNRTG 1 cut(s) 233
MspI CCGG 2 cut(s) 70, 288
Mva1269I GAATGC 2 cut(s) 196, 256
MwoI GCNNNNNNNGC 2 cut(s) 216, 225
NcoI CCATGG 1 cut(s) 276
NlaIII CATG 4 cut(s) 139, 206, 223, 280
NlaIV GGNNCC 1 cut(s) 292
NmuCI GTSAC 1 cut(s) 111
NsiI ATGCAT 1 cut(s) 196
NspI RCATGY 1 cut(s) 223
PctI GAATGC 2 cut(s) 196, 256
PfeI GAWTC 1 cut(s) 266
PkrI GCNGC 2 cut(s) 6, 109
PspN4I GGNNCC 1 cut(s) 292
PspPI GGNCC 2 cut(s) 139, 290
RsaI GTAC 1 cut(s) 184
RsaNI GTAC 1 cut(s) 183
RseI CAYNNNNRTG 1 cut(s) 233
SatI GCNGC 2 cut(s) 5, 108
Sau96I GGNCC 2 cut(s) 139, 290
ScaI AGTACT 1 cut(s) 184
SetI ASST 3 cut(s) 36, 43, 144
SfaNI GCATC 2 cut(s) 63, 203
SinI GGWCC 2 cut(s) 139, 290
SmiMI CAYNNNNRTG 1 cut(s) 233
SsiI CCGC 2 cut(s) 46, 95
SspMI CTAG 1 cut(s) 92
StyI CCWWGG 2 cut(s) 261, 276
TaaI ACNGT 2 cut(s) 161, 182
TaqI TCGA 1 cut(s) 197
TatI WGTACW 1 cut(s) 182
TfiI GAWTC 1 cut(s) 266
TscAI CASTG 1 cut(s) 217
TseFI GTSAC 1 cut(s) 111
TseI GCWGC 2 cut(s) 4, 107
Tsp45I GTSAC 1 cut(s) 111
TspRI CASTG 1 cut(s) 217
VpaK11BI GGWCC 2 cut(s) 139, 290
XceI RCATGY 1 cut(s) 223
XspI CTAG 1 cut(s) 92
ZrmI AGTACT 1 cut(s) 184
Zsp2I ATGCAT 1 cut(s) 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.