Rh4BG366500

Leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
N/A
Physical Location & Seq
Forward (+)
52564459 .. 52565410
952 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG366500.1

Sequence Viewer

Length: 411 bp
ATGGTGAATGACCAGGGAGGCACGTTTGGGCTGCCAAATTTGATGAAAGCCGCGGCGGAAGTTTTGGGAAATGGAGGATTGGGGTCAGCTTATAAGGATGTGATGGGTATTGGGTTGTCTGTGTTGGTGAAGAGGATGAGTGAGATGAATAAAGTGGGGAGAGATGGAATTGATGCTGAAATGAGAAGGTATGGAAGATTAAGGCAGGGTATACCCTCGCGACTTCTGTCCTTGTGCCATATGATTTCCTCCAAGATATTCCTTGGAGTATTGCCCTCATTGTCCAATCGAAACTCGAAAGGCCCAAAGACCCAGCTCGATATAACTTATCAACATTTGGAAGGTAGATATAGAATTGATATTCTTCGTCTTAGAAGAGGAGTTTGTTGGGTTTGTTTATCTTCATCTTGA

Protein Analysis

136

Amino Acids

14.97

Weight (kDa)

10.09

Isoelectric Point (pI)

42.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 93
AccI GTMKAC 1 cut(s) 211
AccII CGCG 2 cut(s) 53, 220
AciI CCGC 3 cut(s) 51, 53, 56
AcsI RAATTY 1 cut(s) 37
AjnI CCWGG 1 cut(s) 12
AluBI AGCT 2 cut(s) 89, 316
AluI AGCT 2 cut(s) 89, 316
AoxI GGCC 1 cut(s) 301
ApeKI GCWGC 1 cut(s) 31
ApoI RAATTY 1 cut(s) 37
AspS9I GGNCC 1 cut(s) 302
AsuHPI GGTGA 2 cut(s) 16, 139
BbvI GCAGC 1 cut(s) 18
BccI CCATC 2 cut(s) 97, 158
BciT130I CCWGG 1 cut(s) 14
BisI GCNGC 3 cut(s) 32, 51, 54
BlsI GCNGC 3 cut(s) 33, 52, 55
Bme1390I CCNGG 1 cut(s) 14
BmgT120I GGNCC 1 cut(s) 302
BmrFI CCNGG 1 cut(s) 14
BmsI GCATC 1 cut(s) 163
BoxI GACNNNNGTC 1 cut(s) 226
BsaJI CCNNGG 3 cut(s) 13, 51, 262
BseBI CCWGG 1 cut(s) 14
BseDI CCNNGG 3 cut(s) 13, 51, 262
BseGI GGATG 2 cut(s) 103, 141
BseRI GAGGAG 1 cut(s) 393
BseXI GCAGC 1 cut(s) 18
BseYI CCCAGC 1 cut(s) 312
Bsh1236I CGCG 2 cut(s) 53, 220
BshFI GGCC 1 cut(s) 303
BsnI GGCC 1 cut(s) 303
Bsp68I TCGCGA 1 cut(s) 220
BspACI CCGC 3 cut(s) 51, 53, 56
BspANI GGCC 1 cut(s) 303
BspFNI CGCG 2 cut(s) 53, 220
BssECI CCNNGG 3 cut(s) 13, 51, 262
BssNAI GTATAC 1 cut(s) 212
BssT1I CCWWGG 1 cut(s) 262
Bst1107I GTATAC 1 cut(s) 212
Bst2UI CCWGG 1 cut(s) 14
Bst6I CTCTTC 2 cut(s) 125, 370
BstDEI CTNAG 1 cut(s) 371
BstDSI CCRYGG 1 cut(s) 51
BstF5I GGATG 2 cut(s) 103, 141
BstFNI CGCG 2 cut(s) 53, 220
BstNI CCWGG 1 cut(s) 14
BstPAI GACNNNNGTC 1 cut(s) 226
BstSCI CCNGG 1 cut(s) 12
BstUI CGCG 2 cut(s) 53, 220
BstV1I GCAGC 1 cut(s) 18
BstZ17I GTATAC 1 cut(s) 212
BsuRI GGCC 1 cut(s) 303
BtgI CCRYGG 1 cut(s) 51
BtsCI GGATG 2 cut(s) 103, 141
BtuMI TCGCGA 1 cut(s) 220
Cfr13I GGNCC 1 cut(s) 302
Cfr42I CCGCGG 1 cut(s) 54
CviJI RGCY 5 cut(s) 31, 50, 89, 303, 316
CviKI_1 RGCY 5 cut(s) 31, 50, 89, 303, 316
DdeI CTNAG 1 cut(s) 371
Eam1104I CTCTTC 2 cut(s) 125, 370
EarI CTCTTC 2 cut(s) 125, 370
EciI GGCGGA 1 cut(s) 71
Eco130I CCWWGG 1 cut(s) 262
EcoRII CCWGG 1 cut(s) 12
EcoT14I CCWWGG 1 cut(s) 262
ErhI CCWWGG 1 cut(s) 262
FaiI YATR 7 cut(s) 93, 192, 212, 240, 242, 323, 351
FauNDI CATATG 1 cut(s) 240
FblI GTMKAC 1 cut(s) 211
Fnu4HI GCNGC 3 cut(s) 32, 51, 54
FokI GGATG 2 cut(s) 110, 148
Fsp4HI GCNGC 3 cut(s) 32, 51, 54
GluI GCNGC 3 cut(s) 32, 51, 54
GsaI CCCAGC 1 cut(s) 316
HaeIII GGCC 1 cut(s) 303
HphI GGTGA 2 cut(s) 16, 139
Hpy166II GTNNAC 1 cut(s) 212
Hpy188III TCNNGA 2 cut(s) 219, 408
Hpy8I GTNNAC 1 cut(s) 212
HpyAV CCTTC 2 cut(s) 180, 335
HpyCH4IV ACGT 1 cut(s) 23
HpyF3I CTNAG 1 cut(s) 371
HpySE526I ACGT 1 cut(s) 23
KspI CCGCGG 1 cut(s) 54
LpnPI CCDG 3 cut(s) 26, 191, 326
Lsp1109I GCAGC 1 cut(s) 18
LweI GCATC 1 cut(s) 163
MaeII ACGT 1 cut(s) 23
MboII GAAGA 5 cut(s) 142, 207, 356, 387, 393
MluCI AATT 3 cut(s) 37, 168, 354
MnlI CCTC 7 cut(s) 11, 68, 126, 226, 259, 286, 371
MseI TTAA 1 cut(s) 200
MspA1I CMGCKG 1 cut(s) 53
MspR9I CCNGG 1 cut(s) 14
MvaI CCWGG 1 cut(s) 14
MvnI CGCG 2 cut(s) 53, 220
NdeI CATATG 1 cut(s) 240
NruI TCGCGA 1 cut(s) 220
PkrI GCNGC 3 cut(s) 33, 52, 55
PshAI GACNNNNGTC 1 cut(s) 226
PsiI TTATAA 1 cut(s) 93
Psp6I CCWGG 1 cut(s) 12
PspFI CCCAGC 1 cut(s) 312
PspGI CCWGG 1 cut(s) 12
PspPI GGNCC 1 cut(s) 302
RruI TCGCGA 1 cut(s) 220
SacII CCGCGG 1 cut(s) 54
SaqAI TTAA 1 cut(s) 200
SatI GCNGC 3 cut(s) 32, 51, 54
Sau96I GGNCC 1 cut(s) 302
ScrFI CCNGG 1 cut(s) 14
SetI ASST 5 cut(s) 26, 91, 191, 318, 346
SfaNI GCATC 1 cut(s) 163
Sfr303I CCGCGG 1 cut(s) 54
SgrBI CCGCGG 1 cut(s) 54
Sse9I AATT 3 cut(s) 37, 168, 354
SsiI CCGC 3 cut(s) 51, 53, 56
StyD4I CCNGG 1 cut(s) 12
StyI CCWWGG 1 cut(s) 262
TaiI ACGT 1 cut(s) 26
TaqI TCGA 3 cut(s) 289, 296, 318
TasI AATT 3 cut(s) 37, 168, 354
TauI GCSGC 2 cut(s) 53, 56
Tru1I TTAA 1 cut(s) 200
Tru9I TTAA 1 cut(s) 200
TseI GCWGC 1 cut(s) 31
TspDTI ATGAA 3 cut(s) 59, 161, 393
XapI RAATTY 1 cut(s) 37
XmiI GTMKAC 1 cut(s) 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.