Rh4DG158300

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
N/A
Physical Location & Seq
Forward (+)
31530255 .. 31546108
15854 bp
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UTR
Exon/CDS
Intron
Rh4DG158300.1

Sequence Viewer

Length: 495 bp
ATGATATTTTCTCAACAAGGAATTGGGAAGTGGAAGTTCCAGAGGTACGATTATTGTGATAACAAAAGAAAAGGTTTCAATGATGCAGAAAAGATGGCAAAAACCCTTAATGACGTTTATAAGGGGGTTTTGCTTGATGGGAGAGAGATTGCTGTGAAGAGGTTTTTCTTTAACAATAGGCATAGAGCAGCAAATTTCTATAATAAAATCAACATTATAAGCACTGTGGAACACAAAAAATTGGGCAGAAGCTTTAATGATTCTGAACCTTATATTAACAACAAGCAAAGAAGAAAGGGCTCGGTTACCAGAAAACAACCTCGTGATGAAAATTTTTGCAGCAGACAAAGAGAAAGCCAGTTTGTGGTGCGCAAGAGACCACGTAACAAAAAGGAATTGGCAAAGAATGAGGAAGACATAATAGACAAACTTTCCAACTCTGTAACAGTTCATGAGACTAAGCTCAAGGTTGACAACATATGTGGAGAAACATGA

Protein Analysis

164

Amino Acids

19.44

Weight (kDa)

9.94

Isoelectric Point (pI)

50.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 120, 218
Acc16I TGCGCA 1 cut(s) 371
AccB7I CCANNNNNTGG 1 cut(s) 364
AcsI RAATTY 2 cut(s) 193, 331
AfaI GTAC 1 cut(s) 47
AfiI CCNNNNNNNGG 1 cut(s) 364
AgsI TTSAA 1 cut(s) 79
AluBI AGCT 2 cut(s) 252, 463
AluI AGCT 2 cut(s) 252, 463
Alw26I GTCTC 2 cut(s) 370, 449
ApeKI GCWGC 2 cut(s) 188, 339
ApoI RAATTY 2 cut(s) 193, 331
AspLEI GCGC 1 cut(s) 372
BanII GRGCYC 1 cut(s) 302
BauI CACGAG 1 cut(s) 321
BbsI GAAGAC 1 cut(s) 420
BbvI GCAGC 2 cut(s) 200, 351
BccI CCATC 2 cut(s) 88, 131
BcoDI GTCTC 2 cut(s) 370, 449
BisI GCNGC 2 cut(s) 189, 340
BlsI GCNGC 2 cut(s) 190, 341
BmsI GCATC 1 cut(s) 73
BpiI GAAGAC 1 cut(s) 420
BpuEI CTTGAG 1 cut(s) 449
BsaAI YACGTR 1 cut(s) 383
BsaI GGTCTC 1 cut(s) 370
Bsc4I CCNNNNNNNGG 1 cut(s) 364
Bse1I ACTGG 1 cut(s) 358
BseLI CCNNNNNNNGG 1 cut(s) 364
BseNI ACTGG 1 cut(s) 358
BseXI GCAGC 2 cut(s) 200, 351
BslI CCNNNNNNNGG 1 cut(s) 364
BsmAI GTCTC 2 cut(s) 370, 449
Bso31I GGTCTC 1 cut(s) 370
Bsp1286I GDGCHC 1 cut(s) 302
BspHI TCATGA 1 cut(s) 451
BspTNI GGTCTC 1 cut(s) 370
BsrI ACTGG 1 cut(s) 358
BssSI CACGAG 1 cut(s) 321
Bst2BI CACGAG 1 cut(s) 321
Bst4CI ACNGT 2 cut(s) 226, 448
Bst6I CTCTTC 1 cut(s) 152
BstBAI YACGTR 1 cut(s) 383
BstDEI CTNAG 1 cut(s) 459
BstEII GGTNACC 1 cut(s) 304
BstHHI GCGC 1 cut(s) 372
BstMAI GTCTC 2 cut(s) 370, 449
BstPI GGTNACC 1 cut(s) 304
BstV1I GCAGC 2 cut(s) 200, 351
BstV2I GAAGAC 1 cut(s) 420
BtsIMutI CAGTG 1 cut(s) 222
CciI TCATGA 1 cut(s) 451
CfoI GCGC 1 cut(s) 372
Csp6I GTAC 1 cut(s) 46
CspCI CAANNNNNGTGG 1 cut(s) 463
CviAII CATG 2 cut(s) 452, 492
CviJI RGCY 4 cut(s) 252, 300, 357, 463
CviKI_1 RGCY 4 cut(s) 252, 300, 357, 463
CviQI GTAC 1 cut(s) 46
DdeI CTNAG 1 cut(s) 459
Eam1104I CTCTTC 1 cut(s) 152
EarI CTCTTC 1 cut(s) 152
Eco24I GRGCYC 1 cut(s) 302
Eco31I GGTCTC 1 cut(s) 370
Eco91I GGTNACC 1 cut(s) 304
EcoO65I GGTNACC 1 cut(s) 304
EcoT38I GRGCYC 1 cut(s) 302
FaeI CATG 2 cut(s) 455, 495
FatI CATG 2 cut(s) 451, 491
FauNDI CATATG 1 cut(s) 479
Fnu4HI GCNGC 2 cut(s) 189, 340
FriOI GRGCYC 1 cut(s) 302
Fsp4HI GCNGC 2 cut(s) 189, 340
FspI TGCGCA 1 cut(s) 371
GlaI GCGC 1 cut(s) 371
GluI GCNGC 2 cut(s) 189, 340
HhaI GCGC 1 cut(s) 372
Hin1II CATG 2 cut(s) 455, 495
Hin6I GCGC 1 cut(s) 370
HinP1I GCGC 1 cut(s) 370
HincII GTYRAC 1 cut(s) 472
HindII GTYRAC 1 cut(s) 472
HindIII AAGCTT 1 cut(s) 250
HinfI GANTC 1 cut(s) 260
Hpy166II GTNNAC 1 cut(s) 472
Hpy188I TCNGA 1 cut(s) 265
Hpy188III TCNNGA 3 cut(s) 40, 323, 452
Hpy8I GTNNAC 1 cut(s) 472
HpyCH4III ACNGT 2 cut(s) 226, 448
HpyCH4IV ACGT 2 cut(s) 114, 382
HpyCH4V TGCA 2 cut(s) 86, 339
HpyF3I CTNAG 1 cut(s) 459
HpySE526I ACGT 2 cut(s) 114, 382
Hsp92II CATG 2 cut(s) 455, 495
HspAI GCGC 1 cut(s) 370
LpnPI CCDG 3 cut(s) 53, 322, 371
Lsp1109I GCAGC 2 cut(s) 200, 351
LweI GCATC 1 cut(s) 73
MaeII ACGT 2 cut(s) 114, 382
MaeIII GTNAC 3 cut(s) 304, 383, 442
MboII GAAGA 3 cut(s) 169, 303, 425
MhlI GDGCHC 1 cut(s) 302
MluCI AATT 5 cut(s) 21, 193, 239, 331, 395
MmeI TCCRAC 1 cut(s) 459
MnlI CCTC 4 cut(s) 36, 153, 330, 403
MseI TTAA 4 cut(s) 108, 171, 255, 276
NdeI CATATG 1 cut(s) 479
NlaIII CATG 2 cut(s) 455, 495
NsbI TGCGCA 1 cut(s) 371
PagI TCATGA 1 cut(s) 451
PfeI GAWTC 1 cut(s) 260
PflMI CCANNNNNTGG 1 cut(s) 364
PkrI GCNGC 2 cut(s) 190, 341
Ppu21I YACGTR 1 cut(s) 383
PsiI TTATAA 2 cut(s) 120, 218
PspEI GGTNACC 1 cut(s) 304
RsaI GTAC 1 cut(s) 47
RsaNI GTAC 1 cut(s) 46
SaqAI TTAA 4 cut(s) 108, 171, 255, 276
SatI GCNGC 2 cut(s) 189, 340
SduI GDGCHC 1 cut(s) 302
SfaNI GCATC 1 cut(s) 73
SmlI CTYRAG 1 cut(s) 464
SmoI CTYRAG 1 cut(s) 464
Sse9I AATT 5 cut(s) 21, 193, 239, 331, 395
TaaI ACNGT 2 cut(s) 226, 448
TaiI ACGT 2 cut(s) 117, 385
TasI AATT 5 cut(s) 21, 193, 239, 331, 395
TfiI GAWTC 1 cut(s) 260
Tru1I TTAA 4 cut(s) 108, 171, 255, 276
Tru9I TTAA 4 cut(s) 108, 171, 255, 276
TscAI CASTG 1 cut(s) 229
TseI GCWGC 2 cut(s) 188, 339
TspDTI ATGAA 2 cut(s) 342, 440
TspRI CASTG 1 cut(s) 229
Van91I CCANNNNNTGG 1 cut(s) 364
XapI RAATTY 2 cut(s) 193, 331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.