Rh5AG189000

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
N/A
Physical Location & Seq
Reverse (-)
21724499 .. 21733611
9113 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG189000.1

Sequence Viewer

Length: 315 bp
ATGGAGCTTCGGAAGACAACGGCGGTGGTTCCGTGCCAAGAATTACTGATGAGATTCTCGGCTTCGTCGCTCCGATTTCAAAGCTTCCAGACTGTTGGACCGGCTTTCCTATATCCACTCGACCACCATGGTCATACTGAGGAAATGAACAAGCTGAACAAGAAAAAGCTAGCTTTTATTATTCTCAGCTGCACAGTTTTCCTCATGGGACTATTAATCATTGGATTGCTCTTGCATAGACAGAGGAAGAAACTCAGCGATCAAGAGATAGACAGGAAGATTCTGTTGACAGCTAGATTCATGTTCCAAGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

104

Amino Acids

12.11

Weight (kDa)

9.75

Isoelectric Point (pI)

44.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 23
AgsI TTSAA 1 cut(s) 80
AluBI AGCT 7 cut(s) 7, 84, 154, 169, 173, 189, 293
AluI AGCT 7 cut(s) 7, 84, 154, 169, 173, 189, 293
ApeKI GCWGC 1 cut(s) 189
AseI ATTAAT 1 cut(s) 215
AspS9I GGNCC 1 cut(s) 98
AsuNHI GCTAGC 1 cut(s) 169
AvaII GGWCC 1 cut(s) 98
BbsI GAAGAC 1 cut(s) 20
BbvI GCAGC 1 cut(s) 176
BceAI ACGGC 1 cut(s) 36
BfaI CTAG 3 cut(s) 170, 294, 313
BisI GCNGC 1 cut(s) 190
BlsI GCNGC 1 cut(s) 191
Bme18I GGWCC 1 cut(s) 98
BmgT120I GGNCC 1 cut(s) 98
BmiI GGNNCC 1 cut(s) 30
BmtI GCTAGC 1 cut(s) 173
BpiI GAAGAC 1 cut(s) 20
BsaJI CCNNGG 1 cut(s) 127
Bse118I RCCGGY 1 cut(s) 100
BseDI CCNNGG 1 cut(s) 127
BseMII CTCAG 3 cut(s) 129, 199, 268
BseXI GCAGC 1 cut(s) 176
BsgI GTGCAG 1 cut(s) 175
BsiSI CCGG 1 cut(s) 101
BslFI GGGAC 1 cut(s) 222
BsmFI GGGAC 1 cut(s) 222
Bsp143I GATC 1 cut(s) 259
Bsp19I CCATGG 1 cut(s) 127
BspACI CCGC 1 cut(s) 23
BspCNI CTCAG 3 cut(s) 130, 198, 267
BspLI GGNNCC 1 cut(s) 30
BspOI GCTAGC 1 cut(s) 173
BsrFI RCCGGY 1 cut(s) 100
BssAI RCCGGY 1 cut(s) 100
BssECI CCNNGG 1 cut(s) 127
BssMI GATC 1 cut(s) 259
BssT1I CCWWGG 1 cut(s) 127
Bst4CI ACNGT 2 cut(s) 94, 196
BstC8I GCNNGC 1 cut(s) 171
BstDEI CTNAG 3 cut(s) 138, 185, 254
BstDSI CCRYGG 1 cut(s) 127
BstKTI GATC 1 cut(s) 262
BstMBI GATC 1 cut(s) 259
BstV1I GCAGC 1 cut(s) 176
BstV2I GAAGAC 1 cut(s) 20
BstXI CCANNNNNNTGG 1 cut(s) 95
BtgI CCRYGG 1 cut(s) 127
Cac8I GCNNGC 1 cut(s) 171
Cfr10I RCCGGY 1 cut(s) 100
Cfr13I GGNCC 1 cut(s) 98
CspCI CAANNNNNGTGG 2 cut(s) 6, 41
CviAII CATG 3 cut(s) 128, 205, 301
CviJI RGCY 9 cut(s) 7, 62, 84, 104, 154, 169, 173, 189, 293
CviKI_1 RGCY 9 cut(s) 7, 62, 84, 104, 154, 169, 173, 189, 293
DdeI CTNAG 3 cut(s) 138, 185, 254
DpnI GATC 1 cut(s) 261
DpnII GATC 1 cut(s) 259
Eco130I CCWWGG 1 cut(s) 127
Eco47I GGWCC 1 cut(s) 98
EcoT14I CCWWGG 1 cut(s) 127
ErhI CCWWGG 1 cut(s) 127
FaeI CATG 3 cut(s) 131, 208, 304
FaiI YATR 6 cut(s) 112, 129, 135, 206, 237, 302
FaqI GGGAC 1 cut(s) 222
FatI CATG 3 cut(s) 127, 204, 300
Fnu4HI GCNGC 1 cut(s) 190
Fsp4HI GCNGC 1 cut(s) 190
FspBI CTAG 3 cut(s) 170, 294, 313
GluI GCNGC 1 cut(s) 190
HapII CCGG 1 cut(s) 101
Hin1II CATG 3 cut(s) 131, 208, 304
HincII GTYRAC 1 cut(s) 288
HindII GTYRAC 1 cut(s) 288
HindIII AAGCTT 1 cut(s) 82
HinfI GANTC 3 cut(s) 54, 280, 297
HpaII CCGG 1 cut(s) 101
Hpy166II GTNNAC 1 cut(s) 288
Hpy188I TCNGA 2 cut(s) 12, 74
Hpy188III TCNNGA 2 cut(s) 88, 263
Hpy8I GTNNAC 1 cut(s) 288
Hpy99I CGWCG 1 cut(s) 70
HpyCH4III ACNGT 2 cut(s) 94, 196
HpyCH4V TGCA 2 cut(s) 192, 235
HpyF3I CTNAG 3 cut(s) 138, 185, 254
Hsp92II CATG 3 cut(s) 131, 208, 304
Kzo9I GATC 1 cut(s) 259
LmnI GCTCC 2 cut(s) 4, 75
LpnPI CCDG 3 cut(s) 101, 114, 259
Lsp1109I GCAGC 1 cut(s) 176
MaeI CTAG 3 cut(s) 170, 294, 313
MalI GATC 1 cut(s) 261
MboI GATC 1 cut(s) 259
MboII GAAGA 3 cut(s) 25, 259, 289
MluCI AATT 1 cut(s) 41
MmeI TCCRAC 1 cut(s) 76
MnlI CCTC 3 cut(s) 133, 212, 237
MseI TTAA 1 cut(s) 215
MspA1I CMGCKG 1 cut(s) 189
MspI CCGG 1 cut(s) 101
NcoI CCATGG 1 cut(s) 127
NdeII GATC 1 cut(s) 259
NheI GCTAGC 1 cut(s) 169
NlaIII CATG 3 cut(s) 131, 208, 304
NlaIV GGNNCC 1 cut(s) 30
NmeAIII GCCGAG 1 cut(s) 38
PfeI GAWTC 3 cut(s) 54, 280, 297
PkrI GCNGC 1 cut(s) 191
PshBI ATTAAT 1 cut(s) 215
PspN4I GGNNCC 1 cut(s) 30
PspPI GGNCC 1 cut(s) 98
PvuII CAGCTG 1 cut(s) 189
SaqAI TTAA 1 cut(s) 215
SatI GCNGC 1 cut(s) 190
Sau3AI GATC 1 cut(s) 259
Sau96I GGNCC 1 cut(s) 98
SetI ASST 7 cut(s) 9, 86, 156, 171, 175, 191, 295
SinI GGWCC 1 cut(s) 98
Sse9I AATT 1 cut(s) 41
SsiI CCGC 1 cut(s) 23
SspMI CTAG 3 cut(s) 170, 294, 313
StyI CCWWGG 1 cut(s) 127
TaaI ACNGT 2 cut(s) 94, 196
TaqI TCGA 1 cut(s) 120
TasI AATT 1 cut(s) 41
TfiI GAWTC 3 cut(s) 54, 280, 297
Tru1I TTAA 1 cut(s) 215
Tru9I TTAA 1 cut(s) 215
TseI GCWGC 1 cut(s) 189
TspDTI ATGAA 2 cut(s) 161, 289
TspGWI ACGGA 1 cut(s) 21
VpaK11BI GGWCC 1 cut(s) 98
VspI ATTAAT 1 cut(s) 215
XspI CTAG 3 cut(s) 170, 294, 313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.