Rh5AG287400

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
N/A
Physical Location & Seq
Forward (+)
38957296 .. 38957552
257 bp
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UTR
Exon/CDS
Intron
Rh5AG287400.1

Sequence Viewer

Length: 195 bp
ATGTCAAAGTCATCTTCTGCAGCCATAGTTGGAGGTGTTGTTGGGGCACTTGCCTTGGTGGCAATAATCGTCGGATTCATGTCGTTCTGCAAGGCACAATGTAATAAGCATTTCCCCAACAAGAACTCAAAGACTGGTTCTTCGGATCCATCTGCAATAGGATACTCTTCTTGCCAACATGGTCGGTTGAGCTGA

Protein Analysis

64

Amino Acids

6.5

Weight (kDa)

9.57

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 140, 153
AluBI AGCT 1 cut(s) 192
AluI AGCT 1 cut(s) 192
AlwI GGATC 2 cut(s) 140, 153
ApeKI GCWGC 1 cut(s) 20
ArsI GACNNNNNNTTYG 2 cut(s) 124, 156
BaeGI GKGCMC 1 cut(s) 49
BamHI GGATCC 1 cut(s) 145
BbvI GCAGC 1 cut(s) 32
BccI CCATC 1 cut(s) 157
BciVI GTATCC 1 cut(s) 155
BfmI CTRYAG 1 cut(s) 18
BfuI GTATCC 1 cut(s) 155
BglI GCCNNNNNGGC 1 cut(s) 59
BisI GCNGC 1 cut(s) 21
BlsI GCNGC 1 cut(s) 22
BmiI GGNNCC 1 cut(s) 147
BsaJI CCNNGG 1 cut(s) 54
BsaXI ACNNNNNCTCC 2 cut(s) 24, 54
Bse1I ACTGG 1 cut(s) 139
BseDI CCNNGG 1 cut(s) 54
BseNI ACTGG 1 cut(s) 139
BseSI GKGCMC 1 cut(s) 49
BseXI GCAGC 1 cut(s) 32
Bsp1286I GDGCHC 1 cut(s) 49
Bsp143I GATC 1 cut(s) 145
BspLI GGNNCC 1 cut(s) 147
BspMAI CTGCAG 1 cut(s) 22
BspPI GGATC 2 cut(s) 140, 153
BsrI ACTGG 1 cut(s) 139
BssECI CCNNGG 1 cut(s) 54
BssMI GATC 1 cut(s) 145
BssT1I CCWWGG 1 cut(s) 54
Bst6I CTCTTC 1 cut(s) 172
BstKTI GATC 1 cut(s) 148
BstMBI GATC 1 cut(s) 145
BstMWI GCNNNNNNNGC 1 cut(s) 59
BstSFI CTRYAG 1 cut(s) 18
BstSLI GKGCMC 1 cut(s) 49
BstV1I GCAGC 1 cut(s) 32
BstX2I RGATCY 1 cut(s) 145
BstYI RGATCY 1 cut(s) 145
BsuI GTATCC 1 cut(s) 155
CviAII CATG 2 cut(s) 79, 179
CviJI RGCY 2 cut(s) 23, 192
CviKI_1 RGCY 2 cut(s) 23, 192
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
Eam1104I CTCTTC 1 cut(s) 172
EarI CTCTTC 1 cut(s) 172
Eco130I CCWWGG 1 cut(s) 54
EcoT14I CCWWGG 1 cut(s) 54
ErhI CCWWGG 1 cut(s) 54
FaeI CATG 2 cut(s) 82, 182
FaiI YATR 3 cut(s) 26, 80, 180
FatI CATG 2 cut(s) 78, 178
Fnu4HI GCNGC 1 cut(s) 21
Fsp4HI GCNGC 1 cut(s) 21
GluI GCNGC 1 cut(s) 21
Hin1II CATG 2 cut(s) 82, 182
HinfI GANTC 1 cut(s) 75
Hpy188I TCNGA 2 cut(s) 74, 145
Hpy99I CGWCG 1 cut(s) 74
HpyCH4V TGCA 3 cut(s) 20, 90, 155
HpyF10VI GCNNNNNNNGC 1 cut(s) 59
Hsp92II CATG 2 cut(s) 82, 182
Kzo9I GATC 1 cut(s) 145
LpnPI CCDG 1 cut(s) 120
Lsp1109I GCAGC 1 cut(s) 32
MalI GATC 1 cut(s) 147
MboI GATC 1 cut(s) 145
MboII GAAGA 3 cut(s) 6, 132, 159
MflI RGATCY 1 cut(s) 145
MhlI GDGCHC 1 cut(s) 49
MmeI TCCRAC 2 cut(s) 10, 52
MnlI CCTC 1 cut(s) 26
MwoI GCNNNNNNNGC 1 cut(s) 59
NdeII GATC 1 cut(s) 145
NlaIII CATG 2 cut(s) 82, 182
NlaIV GGNNCC 1 cut(s) 147
PfeI GAWTC 1 cut(s) 75
PkrI GCNGC 1 cut(s) 22
PspN4I GGNNCC 1 cut(s) 147
PstI CTGCAG 1 cut(s) 22
PsuI RGATCY 1 cut(s) 145
SatI GCNGC 1 cut(s) 21
Sau3AI GATC 1 cut(s) 145
SduI GDGCHC 1 cut(s) 49
SetI ASST 2 cut(s) 37, 194
SfcI CTRYAG 1 cut(s) 18
SgeI CNNG 8 cut(s) 62, 67, 91, 103, 133, 147, 183, 191
StyI CCWWGG 1 cut(s) 54
TfiI GAWTC 1 cut(s) 75
TseI GCWGC 1 cut(s) 20
TspDTI ATGAA 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.