Rh5AG293700
NAC Family

inactive receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
N/A
Physical Location & Seq
Forward (+)
40622959 .. 40625474
2516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG293700.1

Sequence Viewer

Length: 354 bp
ATGGCGGCGCTGGACTTCTGCTTATTGGCTGACACCAGCCGTGGCTACAATCTGGCTTGTAGTGTGGCTACTGGCGGCGATGCTGCAACAACCCGCGCAACAGCAATGCAGCTTTTCCGGGCGCCGAGAGGTTCTTGTATTTCGGCAGCAATCCAGTTCGAAAAGGATGATTTTGATGGGAACATTGGGCTATGCGGGAAGCCTCTTGGGTCTAAATGCGGTGGTCTGAGTAGCAAAAGCCTCGGTATTATAATCGCCGCCGGGGTTATCGGTGCAGTGGGGTCTCTGATTTTGGGGCTTGGGATTTGGTGGTGGTTCTTTGTTAGGCGGTGGCGGAGGGGAGGACGGCGCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

117

Amino Acids

12.32

Weight (kDa)

9.73

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 251
AccB1I GGYRCC 1 cut(s) 121
AccII CGCG 1 cut(s) 96
AciI CCGC 8 cut(s) 5, 75, 94, 195, 219, 258, 328, 334
AcyI GRCGYC 1 cut(s) 122
AluBI AGCT 1 cut(s) 112
AluI AGCT 1 cut(s) 112
Alw26I GTCTC 1 cut(s) 288
ApeKI GCWGC 3 cut(s) 83, 109, 146
AspLEI GCGC 4 cut(s) 10, 98, 124, 351
AsuC2I CCSGG 2 cut(s) 119, 262
AsuII TTCGAA 1 cut(s) 159
BanI GGYRCC 1 cut(s) 121
BbvI GCAGC 3 cut(s) 70, 121, 158
BccI CCATC 1 cut(s) 170
BceAI ACGGC 1 cut(s) 24
BcgI CGANNNNNNTGC 2 cut(s) 223, 257
BcnI CCSGG 2 cut(s) 119, 262
BcoDI GTCTC 1 cut(s) 288
BfoI RGCGCY 3 cut(s) 11, 125, 352
BisI GCNGC 6 cut(s) 6, 76, 84, 110, 147, 258
BlsI GCNGC 6 cut(s) 7, 77, 85, 111, 148, 259
Bme1390I CCNGG 2 cut(s) 119, 262
BmiI GGNNCC 1 cut(s) 123
BmrFI CCNGG 2 cut(s) 119, 262
BmsI GCATC 1 cut(s) 70
Bpu14I TTCGAA 1 cut(s) 159
BpuMI CCSGG 2 cut(s) 119, 262
BsaHI GRCGYC 1 cut(s) 122
BsaI GGTCTC 1 cut(s) 288
BsaJI CCNNGG 3 cut(s) 40, 241, 261
Bse1I ACTGG 2 cut(s) 76, 154
Bse3DI GCAATG 1 cut(s) 111
BseDI CCNNGG 3 cut(s) 40, 241, 261
BseGI GGATG 1 cut(s) 172
BseMI GCAATG 1 cut(s) 111
BseMII CTCAG 1 cut(s) 218
BseNI ACTGG 2 cut(s) 76, 154
BseXI GCAGC 3 cut(s) 70, 121, 158
BsgI GTGCAG 1 cut(s) 294
Bsh1236I CGCG 1 cut(s) 96
BshNI GGYRCC 1 cut(s) 121
BsiSI CCGG 2 cut(s) 118, 261
BsmAI GTCTC 1 cut(s) 288
Bso31I GGTCTC 1 cut(s) 288
Bsp119I TTCGAA 1 cut(s) 159
BspACI CCGC 8 cut(s) 5, 75, 94, 195, 219, 258, 328, 334
BspCNI CTCAG 1 cut(s) 219
BspFNI CGCG 1 cut(s) 96
BspLI GGNNCC 1 cut(s) 123
BspT104I TTCGAA 1 cut(s) 159
BspT107I GGYRCC 1 cut(s) 121
BspTNI GGTCTC 1 cut(s) 288
BsrDI GCAATG 1 cut(s) 111
BsrI ACTGG 2 cut(s) 76, 154
BssECI CCNNGG 3 cut(s) 40, 241, 261
BssNI GRCGYC 1 cut(s) 122
BstACI GRCGYC 1 cut(s) 122
BstBI TTCGAA 1 cut(s) 159
BstDEI CTNAG 1 cut(s) 227
BstDSI CCRYGG 1 cut(s) 40
BstF5I GGATG 1 cut(s) 172
BstFNI CGCG 1 cut(s) 96
BstH2I RGCGCY 3 cut(s) 11, 125, 352
BstHHI GCGC 4 cut(s) 10, 98, 124, 351
BstMAI GTCTC 1 cut(s) 288
BstSCI CCNGG 2 cut(s) 117, 260
BstUI CGCG 1 cut(s) 96
BstV1I GCAGC 3 cut(s) 70, 121, 158
BtgI CCRYGG 1 cut(s) 40
BtgZI GCGATG 1 cut(s) 93
BtsCI GGATG 1 cut(s) 172
BtsI GCAGTG 1 cut(s) 282
BtsIMutI CAGTG 1 cut(s) 282
CfoI GCGC 4 cut(s) 10, 98, 124, 351
DdeI CTNAG 1 cut(s) 227
DinI GGCGCC 1 cut(s) 123
EciI GGCGGA 1 cut(s) 349
Eco31I GGTCTC 1 cut(s) 288
EgeI GGCGCC 1 cut(s) 123
EheI GGCGCC 1 cut(s) 123
FaiI YATR 2 cut(s) 193, 251
FauI CCCGC 2 cut(s) 101, 188
Fnu4HI GCNGC 6 cut(s) 6, 76, 84, 110, 147, 258
FokI GGATG 1 cut(s) 179
Fsp4HI GCNGC 6 cut(s) 6, 76, 84, 110, 147, 258
GlaI GCGC 4 cut(s) 9, 97, 123, 350
GluI GCNGC 6 cut(s) 6, 76, 84, 110, 147, 258
HaeII RGCGCY 3 cut(s) 11, 125, 352
HapII CCGG 2 cut(s) 118, 261
HhaI GCGC 4 cut(s) 10, 98, 124, 351
Hin1I GRCGYC 1 cut(s) 122
Hin6I GCGC 4 cut(s) 8, 96, 122, 349
HinP1I GCGC 4 cut(s) 8, 96, 122, 349
HpaII CCGG 2 cut(s) 118, 261
Hpy188I TCNGA 2 cut(s) 228, 288
HpyCH4V TGCA 3 cut(s) 86, 109, 275
HpyF3I CTNAG 1 cut(s) 227
Hsp92I GRCGYC 1 cut(s) 122
HspAI GCGC 4 cut(s) 8, 96, 122, 349
KasI GGCGCC 1 cut(s) 121
LpnPI CCDG 6 cut(s) 38, 49, 57, 131, 167, 274
Lsp1109I GCAGC 3 cut(s) 70, 121, 158
LweI GCATC 1 cut(s) 70
Mly113I GGCGCC 1 cut(s) 122
MnlI CCTC 5 cut(s) 122, 213, 251, 330, 335
MspI CCGG 2 cut(s) 118, 261
MspR9I CCNGG 2 cut(s) 119, 262
MvnI CGCG 1 cut(s) 96
NarI GGCGCC 1 cut(s) 122
NciI CCSGG 2 cut(s) 119, 262
NlaIV GGNNCC 1 cut(s) 123
NmeAIII GCCGAG 1 cut(s) 150
NspV TTCGAA 1 cut(s) 159
PkrI GCNGC 6 cut(s) 7, 77, 85, 111, 148, 259
PluTI GGCGCC 1 cut(s) 125
PsiI TTATAA 1 cut(s) 251
PspN4I GGNNCC 1 cut(s) 123
SatI GCNGC 6 cut(s) 6, 76, 84, 110, 147, 258
ScrFI CCNGG 2 cut(s) 119, 262
SetI ASST 2 cut(s) 114, 133
SfaNI GCATC 1 cut(s) 70
SfoI GGCGCC 1 cut(s) 123
SfuI TTCGAA 1 cut(s) 159
SsiI CCGC 8 cut(s) 5, 75, 94, 195, 219, 258, 328, 334
SspDI GGCGCC 1 cut(s) 121
StyD4I CCNGG 2 cut(s) 117, 260
TaqI TCGA 1 cut(s) 159
TauI GCSGC 3 cut(s) 8, 78, 260
TscAI CASTG 1 cut(s) 282
TseI GCWGC 3 cut(s) 83, 109, 146
TspRI CASTG 1 cut(s) 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.