Rh5BG205400

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
N/A
Physical Location & Seq
Reverse (-)
23320082 .. 23322528
2447 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG205400.1

Sequence Viewer

Length: 705 bp
ATGAGTGGAGGGCTTCGTTCAAGCGTGAAGTCGTACCTTAATACGAAACGCCTCCCTTTCTCTGGGGAAATAGATACAGTGAATGAGACAAATGAAACCATCAATCGCAATTTCAGTGCACTCCAAGCTGCTGTTGATTCCGTGGATAAGAAGAAACCGCAAGAGAAAAGCATTGCTTTGACTTCATATCAGCTCAGTATGTATGACGGTAGCTGGCCGGCCAATGTTGAGCTCTGCTCCAGAGCTTTGTTTATAGGCCTTGTTTTTTTGTTTAATTACTTTGGGTGCCTGAATGTTGTTGGAACAGGAGCTTCTTCCCTTCAACCACTCTCGTGGATCCTGCGTATGAAGATTGCCCTTGGTGCTGCCAACTCTCTAGCATTTATTCACAGTGGTGAGGGAAAAGTGATCCATCGTGACGTCAAAAGTTCTAATATCTTACTGGATTCATATTCTGTGGCTGCAGCTCGTAAAGCAGCTAACCTTACAAATCAATGCTTATCAACAGAACCCGAGTTGAGGCCAAACATGAATGAGGTGGTAAAAGCGTTGGAGCAGCTTCAGGAATCTGGTAACAATGAGGGTTCAGGAATCTCTCACAACGAGCCTCGCCAATCTCCTTATTCCAATTCAAACAGTGCCAAATCAAGCTGGAGAAGCTGGATCAGCTTCAGGTCATCTTCTTCCCACAGCTACATAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

234

Amino Acids

25.66

Weight (kDa)

9.13

Isoelectric Point (pI)

50.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 423
AccB1I GGYRCC 1 cut(s) 285
AciI CCGC 1 cut(s) 158
AclWI GGATC 4 cut(s) 331, 344, 403, 671
AcoI YGGCCR 2 cut(s) 215, 219
AcuI CTGAAG 2 cut(s) 545, 655
AcyI GRCGYC 1 cut(s) 420
AfaI GTAC 1 cut(s) 35
AfiI CCNNNNNNNGG 2 cut(s) 62, 519
AgsI TTSAA 3 cut(s) 21, 323, 633
AleI CACNNNNGTG 2 cut(s) 331, 393
Alw21I GWGCWC 2 cut(s) 121, 234
Alw26I GTCTC 1 cut(s) 80
Alw44I GTGCAC 1 cut(s) 117
AlwI GGATC 4 cut(s) 331, 344, 403, 671
Ama87I CYCGRG 1 cut(s) 512
AoxI GGCC 4 cut(s) 215, 219, 256, 521
ApaLI GTGCAC 1 cut(s) 117
ApeKI GCWGC 6 cut(s) 128, 365, 461, 464, 476, 556
AsuHPI GGTGA 1 cut(s) 407
AvaI CYCGRG 1 cut(s) 512
BaeGI GKGCMC 1 cut(s) 121
BamHI GGATCC 1 cut(s) 336
BanI GGYRCC 1 cut(s) 285
BanII GRGCYC 1 cut(s) 234
BauI CACGAG 1 cut(s) 331
Bbv12I GWGCWC 2 cut(s) 121, 234
BbvI GCAGC 6 cut(s) 115, 352, 448, 476, 488, 568
BccI CCATC 2 cut(s) 107, 420
BcoDI GTCTC 1 cut(s) 80
BfaI CTAG 1 cut(s) 377
BfmI CTRYAG 1 cut(s) 462
BisI GCNGC 6 cut(s) 129, 366, 462, 465, 477, 557
BlsI GCNGC 6 cut(s) 130, 367, 463, 466, 478, 558
BmeT110I CYCGRG 1 cut(s) 512
BmiI GGNNCC 2 cut(s) 287, 338
BplI GAGNNNNNCTC 2 cut(s) 221, 253
BpmI CTGGAG 2 cut(s) 223, 673
BsaHI GRCGYC 1 cut(s) 420
BsaJI CCNNGG 2 cut(s) 141, 358
Bsc4I CCNNNNNNNGG 2 cut(s) 62, 519
Bse118I RCCGGY 1 cut(s) 217
Bse1I ACTGG 1 cut(s) 447
Bse3DI GCAATG 1 cut(s) 171
BseDI CCNNGG 2 cut(s) 141, 358
BseLI CCNNNNNNNGG 2 cut(s) 62, 519
BseMI GCAATG 1 cut(s) 171
BseMII CTCAG 1 cut(s) 208
BseNI ACTGG 1 cut(s) 447
BseSI GKGCMC 1 cut(s) 121
BseXI GCAGC 6 cut(s) 115, 352, 448, 476, 488, 568
BshFI GGCC 4 cut(s) 217, 221, 258, 523
BshNI GGYRCC 1 cut(s) 285
BsiHKAI GWGCWC 2 cut(s) 121, 234
BsiHKCI CYCGRG 1 cut(s) 512
BsiSI CCGG 1 cut(s) 218
BslI CCNNNNNNNGG 2 cut(s) 62, 519
BsmAI GTCTC 1 cut(s) 80
BsnI GGCC 4 cut(s) 217, 221, 258, 523
BsoBI CYCGRG 1 cut(s) 512
Bsp1286I GDGCHC 2 cut(s) 121, 234
Bsp143I GATC 3 cut(s) 336, 408, 663
BspACI CCGC 1 cut(s) 158
BspANI GGCC 4 cut(s) 217, 221, 258, 523
BspCNI CTCAG 1 cut(s) 207
BspLI GGNNCC 2 cut(s) 287, 338
BspMAI CTGCAG 1 cut(s) 466
BspPI GGATC 4 cut(s) 331, 344, 403, 671
BspT107I GGYRCC 1 cut(s) 285
BsrDI GCAATG 1 cut(s) 171
BsrFI RCCGGY 1 cut(s) 217
BsrI ACTGG 1 cut(s) 447
BssAI RCCGGY 1 cut(s) 217
BssECI CCNNGG 2 cut(s) 141, 358
BssMI GATC 3 cut(s) 336, 408, 663
BssNI GRCGYC 1 cut(s) 420
BssSI CACGAG 1 cut(s) 331
BssT1I CCWWGG 1 cut(s) 358
Bst2BI CACGAG 1 cut(s) 331
Bst4CI ACNGT 4 cut(s) 79, 209, 392, 638
BstACI GRCGYC 1 cut(s) 420
BstC8I GCNNGC 2 cut(s) 215, 219
BstDEI CTNAG 1 cut(s) 194
BstDSI CCRYGG 1 cut(s) 141
BstKTI GATC 3 cut(s) 339, 411, 666
BstMAI GTCTC 1 cut(s) 80
BstMBI GATC 3 cut(s) 336, 408, 663
BstMWI GCNNNNNNNGC 5 cut(s) 125, 362, 473, 657, 666
BstSFI CTRYAG 1 cut(s) 462
BstSLI GKGCMC 1 cut(s) 121
BstV1I GCAGC 6 cut(s) 115, 352, 448, 476, 488, 568
BstX2I RGATCY 1 cut(s) 336
BstXI CCANNNNNNTGG 1 cut(s) 333
BstYI RGATCY 1 cut(s) 336
BsuRI GGCC 4 cut(s) 217, 221, 258, 523
BtgI CCRYGG 1 cut(s) 141
BtsIMutI CAGTG 4 cut(s) 84, 121, 397, 643
Cac8I GCNNGC 2 cut(s) 215, 219
Cfr10I RCCGGY 1 cut(s) 217
Csp6I GTAC 1 cut(s) 34
CviAII CATG 1 cut(s) 529
CviQI GTAC 1 cut(s) 34
DdeI CTNAG 1 cut(s) 194
DpnI GATC 3 cut(s) 338, 410, 665
DpnII GATC 3 cut(s) 336, 408, 663
EaeI YGGCCR 2 cut(s) 215, 219
Ecl136II GAGCTC 1 cut(s) 232
Eco130I CCWWGG 1 cut(s) 358
Eco147I AGGCCT 1 cut(s) 258
Eco24I GRGCYC 1 cut(s) 234
Eco53kI GAGCTC 1 cut(s) 232
Eco57I CTGAAG 2 cut(s) 545, 655
Eco88I CYCGRG 1 cut(s) 512
EcoICRI GAGCTC 1 cut(s) 232
EcoT14I CCWWGG 1 cut(s) 358
EcoT38I GRGCYC 1 cut(s) 234
ErhI CCWWGG 1 cut(s) 358
FaeI CATG 1 cut(s) 532
FaiI YATR 8 cut(s) 187, 200, 204, 254, 347, 451, 530, 698
FalI AAGNNNNNCTT 2 cut(s) 160, 192
FatI CATG 1 cut(s) 528
Fnu4HI GCNGC 6 cut(s) 129, 366, 462, 465, 477, 557
FriOI GRGCYC 1 cut(s) 234
FseI GGCCGGCC 1 cut(s) 221
Fsp4HI GCNGC 6 cut(s) 129, 366, 462, 465, 477, 557
FspBI CTAG 1 cut(s) 377
GluI GCNGC 6 cut(s) 129, 366, 462, 465, 477, 557
GsuI CTGGAG 2 cut(s) 223, 673
HaeIII GGCC 4 cut(s) 217, 221, 258, 523
HapII CCGG 1 cut(s) 218
Hin1I GRCGYC 1 cut(s) 420
Hin1II CATG 1 cut(s) 532
HinfI GANTC 4 cut(s) 137, 446, 566, 591
HpaII CCGG 1 cut(s) 218
HphI GGTGA 1 cut(s) 407
Hpy166II GTNNAC 1 cut(s) 119
Hpy188III TCNNGA 4 cut(s) 240, 416, 563, 588
Hpy8I GTNNAC 1 cut(s) 119
HpyAV CCTTC 1 cut(s) 329
HpyCH4III ACNGT 4 cut(s) 79, 209, 392, 638
HpyCH4IV ACGT 1 cut(s) 420
HpyCH4V TGCA 2 cut(s) 119, 464
HpyF10VI GCNNNNNNNGC 5 cut(s) 125, 362, 473, 657, 666
HpyF3I CTNAG 1 cut(s) 194
HpySE526I ACGT 1 cut(s) 420
Hsp92I GRCGYC 1 cut(s) 420
Hsp92II CATG 1 cut(s) 532
KroI GCCGGC 1 cut(s) 217
KroNI GCCGGC 1 cut(s) 219
Kzo9I GATC 3 cut(s) 336, 408, 663
LmnI GCTCC 3 cut(s) 242, 308, 553
Lsp1109I GCAGC 6 cut(s) 115, 352, 448, 476, 488, 568
MaeI CTAG 1 cut(s) 377
MaeII ACGT 1 cut(s) 420
MaeIII GTNAC 2 cut(s) 416, 572
MalI GATC 3 cut(s) 338, 410, 665
MboI GATC 3 cut(s) 336, 408, 663
MboII GAAGA 5 cut(s) 163, 306, 361, 672, 675
MflI RGATCY 1 cut(s) 336
MhlI GDGCHC 2 cut(s) 121, 234
MluCI AATT 3 cut(s) 109, 274, 628
MmeI TCCRAC 2 cut(s) 280, 531
MnlI CCTC 6 cut(s) 62, 391, 513, 529, 574, 618
MroNI GCCGGC 1 cut(s) 217
MseI TTAA 2 cut(s) 39, 273
MslI CAYNNNNRTG 2 cut(s) 331, 393
MspI CCGG 1 cut(s) 218
MwoI GCNNNNNNNGC 5 cut(s) 125, 362, 473, 657, 666
NaeI GCCGGC 1 cut(s) 219
NdeII GATC 3 cut(s) 336, 408, 663
NgoMIV GCCGGC 1 cut(s) 217
NlaIII CATG 1 cut(s) 532
NlaIV GGNNCC 2 cut(s) 287, 338
NmuCI GTSAC 1 cut(s) 416
OliI CACNNNNGTG 2 cut(s) 331, 393
PceI AGGCCT 1 cut(s) 258
PdiI GCCGGC 1 cut(s) 219
PfeI GAWTC 4 cut(s) 137, 446, 566, 591
PkrI GCNGC 6 cut(s) 130, 367, 463, 466, 478, 558
Psp124BI GAGCTC 1 cut(s) 234
PspN4I GGNNCC 2 cut(s) 287, 338
PstI CTGCAG 1 cut(s) 466
PsuI RGATCY 1 cut(s) 336
RigI GGCCGGCC 1 cut(s) 221
RsaI GTAC 1 cut(s) 35
RsaNI GTAC 1 cut(s) 34
RseI CAYNNNNRTG 2 cut(s) 331, 393
SacI GAGCTC 1 cut(s) 234
SaqAI TTAA 2 cut(s) 39, 273
SatI GCNGC 6 cut(s) 129, 366, 462, 465, 477, 557
Sau3AI GATC 3 cut(s) 336, 408, 663
SduI GDGCHC 2 cut(s) 121, 234
SfcI CTRYAG 1 cut(s) 462
SmiMI CAYNNNNRTG 2 cut(s) 331, 393
Sse9I AATT 3 cut(s) 109, 274, 628
SseBI AGGCCT 1 cut(s) 258
SsiI CCGC 1 cut(s) 158
SspMI CTAG 1 cut(s) 377
SstI GAGCTC 1 cut(s) 234
StuI AGGCCT 1 cut(s) 258
StyI CCWWGG 1 cut(s) 358
TaaI ACNGT 4 cut(s) 79, 209, 392, 638
TaiI ACGT 1 cut(s) 423
TasI AATT 3 cut(s) 109, 274, 628
TfiI GAWTC 4 cut(s) 137, 446, 566, 591
Tru1I TTAA 2 cut(s) 39, 273
Tru9I TTAA 2 cut(s) 39, 273
TscAI CASTG 4 cut(s) 84, 121, 397, 643
TseFI GTSAC 1 cut(s) 416
TseI GCWGC 6 cut(s) 128, 365, 461, 464, 476, 556
Tsp45I GTSAC 1 cut(s) 416
TspDTI ATGAA 5 cut(s) 108, 174, 362, 438, 545
TspGWI ACGGA 1 cut(s) 130
TspRI CASTG 4 cut(s) 84, 121, 397, 643
VneI GTGCAC 1 cut(s) 117
XspI CTAG 1 cut(s) 377
ZraI GACGTC 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.