Rh5BG378600

Protein kinase domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
N/A
Physical Location & Seq
Forward (+)
59964541 .. 59964831
291 bp
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UTR
Exon/CDS
Intron
Rh5BG378600.1

Sequence Viewer

Length: 291 bp
ATGTCGACATGTTTATCTCCGGATATTCTTGCTGGATTAAAGTACTCTTTGTTCAACTACAGCATAGAAGAGATCAGGAAAACAACAAGGGATTTCAATGAAGAGAACAAGACTGGTGCTCTAGTCTATATAGTCTATAGAGGGGTGATAAACAATGCTGAAGTGATGATGAAGCAGATGACATTTGTCGAAACTAGCCATGTTATAGATATCCATTCCAAAATCAAACACATCAATATCTTGAACTTGGAGGGTGTTTCTTATGAAGTGACTTGTCCTGGTCATATCTAG

Protein Analysis

96

Amino Acids

10.94

Weight (kDa)

6.04

Isoelectric Point (pI)

48.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 5
AccIII TCCGGA 1 cut(s) 19
AcuI CTGAAG 1 cut(s) 180
AfaI GTAC 1 cut(s) 44
AflIII ACRYGT 1 cut(s) 8
AgsI TTSAA 3 cut(s) 55, 97, 244
AjnI CCWGG 1 cut(s) 277
Alw21I GWGCWC 1 cut(s) 121
Aor13HI TCCGGA 1 cut(s) 19
AsuHPI GGTGA 1 cut(s) 157
Bbv12I GWGCWC 1 cut(s) 121
BciT130I CCWGG 1 cut(s) 279
BfaI CTAG 3 cut(s) 122, 195, 289
BfmI CTRYAG 2 cut(s) 58, 136
BmcAI AGTACT 1 cut(s) 44
Bme1390I CCNGG 1 cut(s) 279
BmrFI CCNGG 1 cut(s) 279
BoxI GACNNNNGTC 1 cut(s) 185
BsaWI WCCGGW 1 cut(s) 19
Bse1I ACTGG 1 cut(s) 118
BseAI TCCGGA 1 cut(s) 19
BseBI CCWGG 1 cut(s) 279
BseNI ACTGG 1 cut(s) 118
BsiHKAI GWGCWC 1 cut(s) 121
BsiSI CCGG 1 cut(s) 20
Bsp1286I GDGCHC 1 cut(s) 121
Bsp13I TCCGGA 1 cut(s) 19
Bsp143I GATC 1 cut(s) 72
BspEI TCCGGA 1 cut(s) 19
BsrI ACTGG 1 cut(s) 118
BssMI GATC 1 cut(s) 72
Bst2UI CCWGG 1 cut(s) 279
Bst6I CTCTTC 2 cut(s) 63, 96
BstKTI GATC 1 cut(s) 75
BstMBI GATC 1 cut(s) 72
BstNI CCWGG 1 cut(s) 279
BstNSI RCATGY 1 cut(s) 12
BstPAI GACNNNNGTC 1 cut(s) 185
BstSCI CCNGG 1 cut(s) 277
BstSFI CTRYAG 2 cut(s) 58, 136
Csp6I GTAC 1 cut(s) 43
CviAII CATG 2 cut(s) 9, 200
CviJI RGCY 1 cut(s) 198
CviKI_1 RGCY 1 cut(s) 198
CviQI GTAC 1 cut(s) 43
DpnI GATC 1 cut(s) 74
DpnII GATC 1 cut(s) 72
Eam1104I CTCTTC 2 cut(s) 63, 96
EarI CTCTTC 2 cut(s) 63, 96
Eco32I GATATC 1 cut(s) 211
Eco57I CTGAAG 1 cut(s) 180
EcoRII CCWGG 1 cut(s) 277
EcoRV GATATC 1 cut(s) 211
FaeI CATG 2 cut(s) 12, 203
FaiI YATR 9 cut(s) 10, 65, 129, 131, 138, 201, 206, 264, 285
FatI CATG 2 cut(s) 8, 199
FblI GTMKAC 1 cut(s) 5
FspBI CTAG 3 cut(s) 122, 195, 289
HapII CCGG 1 cut(s) 20
Hin1II CATG 2 cut(s) 12, 203
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HpaII CCGG 1 cut(s) 20
HphI GGTGA 1 cut(s) 157
Hpy166II GTNNAC 1 cut(s) 6
Hpy188III TCNNGA 3 cut(s) 20, 76, 241
Hpy8I GTNNAC 1 cut(s) 6
Hsp92II CATG 2 cut(s) 12, 203
Kpn2I TCCGGA 1 cut(s) 19
Kzo9I GATC 1 cut(s) 72
LpnPI CCDG 5 cut(s) 18, 33, 61, 99, 264
MaeI CTAG 3 cut(s) 122, 195, 289
MaeIII GTNAC 1 cut(s) 268
MalI GATC 1 cut(s) 74
MboI GATC 1 cut(s) 72
MboII GAAGA 2 cut(s) 80, 113
MhlI GDGCHC 1 cut(s) 121
MnlI CCTC 2 cut(s) 134, 244
MroI TCCGGA 1 cut(s) 19
MseI TTAA 1 cut(s) 38
MspI CCGG 1 cut(s) 20
MspR9I CCNGG 1 cut(s) 279
MvaI CCWGG 1 cut(s) 279
NdeII GATC 1 cut(s) 72
NlaIII CATG 2 cut(s) 12, 203
NmuCI GTSAC 1 cut(s) 268
NspI RCATGY 1 cut(s) 12
PciI ACATGT 1 cut(s) 8
PscI ACATGT 1 cut(s) 8
PshAI GACNNNNGTC 1 cut(s) 185
Psp6I CCWGG 1 cut(s) 277
PspGI CCWGG 1 cut(s) 277
PsrI GAACNNNNNNTAC 2 cut(s) 35, 67
RsaI GTAC 1 cut(s) 44
RsaNI GTAC 1 cut(s) 43
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 1 cut(s) 38
Sau3AI GATC 1 cut(s) 72
ScaI AGTACT 1 cut(s) 44
ScrFI CCNGG 1 cut(s) 279
SduI GDGCHC 1 cut(s) 121
SfcI CTRYAG 2 cut(s) 58, 136
SspMI CTAG 3 cut(s) 122, 195, 289
StyD4I CCNGG 1 cut(s) 277
TaqI TCGA 2 cut(s) 5, 189
TatI WGTACW 1 cut(s) 42
Tru1I TTAA 1 cut(s) 38
Tru9I TTAA 1 cut(s) 38
TseFI GTSAC 1 cut(s) 268
Tsp45I GTSAC 1 cut(s) 268
TspDTI ATGAA 3 cut(s) 114, 185, 279
XceI RCATGY 1 cut(s) 12
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 3 cut(s) 122, 195, 289
ZrmI AGTACT 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.