Rh5CG049500

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
N/A
Physical Location & Seq
Reverse (-)
3522903 .. 3532880
9978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG049500.1

Sequence Viewer

Length: 1098 bp
ATGCCAAGAGGTGTTGGAATCAATAGTGTTAGTGTTTTAAATTCCTCCATGTTGTTCCTATTCATCTTCAGCTTGCTTCCCTCACAATATTGGGCTGAAGTTTATGAGCTGAGTCCTTCACAATCATTAGCACAGGGACAAACTCTAGTCTCTCCTGGCCAAATTTTTGAATTGGGATTTTTTAGTCCTAATAATTCTGCTAATAAGTATGTCGGGATGTGGCACAAAAGTATATTTCCCCGTAAAATTGTGTGGGTGGCTAACAGAGAAAATCCCCTTGCAGTTACAGATAGCTTGGCTACTTTGAGGATTGGCAGCAATGGAAATCTGGAGCTTGTAGATGGGAAGCAGAGTTCTGTCTGGTCAACCAATGTTTCGGTGTCAACTAATGGTTCGGCTGCAGTTCTTTTAGACAATGGAACCTTTGTTCTCAAAGATGATATGGGAGCTGATTTGTGGCAGAGTTTGGATTATCCTGGTGACTCACTTCTGCCAAGCATGTTGCTGGGATTTGATAGTAATACTGGAAACTGGAATCTGTTGACATCGTGGAAAGGTGCAAATGATCCATCAACTGGGATATTCTCGGTTGGATTGTCAGCAGAAACTCCGACACAAGTATTCATCTGGAAAAATGGAGCAACTCCCCACTGGAGAAGTGGTCCATGGGATAAATCAAAGTTCGTTGGTATACCTGGAATGAGTACTCAATATCTAAGTGGATTTATTGTAGATGATAATGTCAAACAGGGAACAAGTCTAACAATTGTAGCCATCATATTCGAATTTTGTCAGGCGTGGCACTTGTGGAGTGAACGCAGGGGATTGGAGTTAGTAGACGAAGTATTGGCTGATTTATATTCGCAATCAGAAGTAATGAGATGCCTGCAGATTGGGCTTCTTTGTGTACAAGACAATGCTGTGGATAGGCCAAGCATGCCGGAAGTAGTTTTCATGCTAAGTAGTAACACAGACAGTCCACAACCTATGAAGCCTATATTCACTTTCCACAACGCAGTCTCTCCTTCTCAACCACAGTATGTGAAAAGTACTTGTTCAGGAAATGAAGCTACCATAACGATAATCGAAGGGCGATAG

Protein Analysis

365

Amino Acids

40.04

Weight (kDa)

4.87

Isoelectric Point (pI)

36.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 83 - 185 8.5e-29 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 575
AccI GTMKAC 2 cut(s) 691, 837
AclWI GGATC 1 cut(s) 560
AcoI YGGCCR 1 cut(s) 157
AcsI RAATTY 3 cut(s) 40, 162, 785
AcuI CTGAAG 2 cut(s) 52, 117
AfaI GTAC 3 cut(s) 706, 909, 1051
AfiI CCNNNNNNNGG 1 cut(s) 575
AgsI TTSAA 1 cut(s) 170
AjnI CCWGG 3 cut(s) 154, 475, 694
AloI GAACNNNNNNTCC 4 cut(s) 337, 369, 411, 443
AluBI AGCT 6 cut(s) 72, 109, 294, 334, 449, 1070
AluI AGCT 6 cut(s) 72, 109, 294, 334, 449, 1070
Alw26I GTCTC 2 cut(s) 154, 1024
AlwI GGATC 1 cut(s) 560
AoxI GGCC 2 cut(s) 157, 929
ApeKI GCWGC 2 cut(s) 315, 398
ApoI RAATTY 3 cut(s) 40, 162, 785
AspS9I GGNCC 1 cut(s) 662
AsuHPI GGTGA 1 cut(s) 491
AsuII TTCGAA 1 cut(s) 783
AvaII GGWCC 1 cut(s) 662
BalI TGGCCA 1 cut(s) 159
BbvI GCAGC 2 cut(s) 327, 385
BccI CCATC 3 cut(s) 335, 577, 782
BciT130I CCWGG 3 cut(s) 156, 477, 696
BcoDI GTCTC 2 cut(s) 154, 1024
BfaI CTAG 1 cut(s) 146
BfmI CTRYAG 2 cut(s) 399, 887
BisI GCNGC 2 cut(s) 316, 399
BlsI GCNGC 2 cut(s) 317, 400
BmcAI AGTACT 2 cut(s) 706, 1051
Bme1390I CCNGG 3 cut(s) 156, 477, 696
Bme18I GGWCC 1 cut(s) 662
BmgT120I GGNCC 1 cut(s) 662
BmiI GGNNCC 1 cut(s) 421
BmrFI CCNGG 3 cut(s) 156, 477, 696
BmrI ACTGGG 1 cut(s) 585
BmsI GCATC 1 cut(s) 872
BmuI ACTGGG 1 cut(s) 585
BpmI CTGGAG 2 cut(s) 350, 673
Bpu14I TTCGAA 1 cut(s) 783
BsaJI CCNNGG 1 cut(s) 665
BsaXI ACNNNNNCTCC 2 cut(s) 646, 676
Bsc4I CCNNNNNNNGG 1 cut(s) 575
Bse1I ACTGG 4 cut(s) 529, 536, 580, 656
Bse3DI GCAATG 1 cut(s) 325
BseBI CCWGG 3 cut(s) 156, 477, 696
BseDI CCNNGG 1 cut(s) 665
BseGI GGATG 1 cut(s) 222
BseLI CCNNNNNNNGG 1 cut(s) 575
BseMI GCAATG 1 cut(s) 325
BseMII CTCAG 1 cut(s) 101
BseNI ACTGG 4 cut(s) 529, 536, 580, 656
BseXI GCAGC 2 cut(s) 327, 385
BseYI CCCAGC 1 cut(s) 505
BshFI GGCC 2 cut(s) 159, 931
BsiSI CCGG 1 cut(s) 941
BslFI GGGAC 1 cut(s) 150
BslI CCNNNNNNNGG 1 cut(s) 575
BsmAI GTCTC 2 cut(s) 154, 1024
BsmFI GGGAC 1 cut(s) 150
BsnI GGCC 2 cut(s) 159, 931
Bsp119I TTCGAA 1 cut(s) 783
Bsp1407I TGTACA 1 cut(s) 907
Bsp143I GATC 1 cut(s) 565
Bsp19I CCATGG 1 cut(s) 665
BspANI GGCC 2 cut(s) 159, 931
BspCNI CTCAG 1 cut(s) 102
BspLI GGNNCC 1 cut(s) 421
BspMAI CTGCAG 2 cut(s) 403, 891
BspPI GGATC 1 cut(s) 560
BspT104I TTCGAA 1 cut(s) 783
BsrDI GCAATG 1 cut(s) 325
BsrGI TGTACA 1 cut(s) 907
BsrI ACTGG 4 cut(s) 529, 536, 580, 656
BssECI CCNNGG 1 cut(s) 665
BssMI GATC 1 cut(s) 565
BssNAI GTATAC 1 cut(s) 692
BssT1I CCWWGG 1 cut(s) 665
Bst1107I GTATAC 1 cut(s) 692
Bst2UI CCWGG 3 cut(s) 156, 477, 696
Bst4CI ACNGT 2 cut(s) 977, 1038
BstAUI TGTACA 1 cut(s) 907
BstBI TTCGAA 1 cut(s) 783
BstC8I GCNNGC 3 cut(s) 74, 887, 938
BstDEI CTNAG 3 cut(s) 110, 716, 959
BstDSI CCRYGG 1 cut(s) 665
BstF5I GGATG 1 cut(s) 222
BstKTI GATC 1 cut(s) 568
BstMAI GTCTC 2 cut(s) 154, 1024
BstMBI GATC 1 cut(s) 565
BstMWI GCNNNNNNNGC 2 cut(s) 895, 937
BstNI CCWGG 3 cut(s) 156, 477, 696
BstNSI RCATGY 2 cut(s) 502, 940
BstSCI CCNGG 3 cut(s) 154, 475, 694
BstSFI CTRYAG 2 cut(s) 399, 887
BstV1I GCAGC 2 cut(s) 327, 385
BstZ17I GTATAC 1 cut(s) 692
BsuRI GGCC 2 cut(s) 159, 931
BtgI CCRYGG 1 cut(s) 665
BtsCI GGATG 1 cut(s) 222
BtsIMutI CAGTG 1 cut(s) 649
Cac8I GCNNGC 3 cut(s) 74, 887, 938
Cfr13I GGNCC 1 cut(s) 662
Csp6I GTAC 3 cut(s) 705, 908, 1050
CviAII CATG 5 cut(s) 49, 499, 666, 937, 955
CviQI GTAC 3 cut(s) 705, 908, 1050
DdeI CTNAG 3 cut(s) 110, 716, 959
DpnI GATC 1 cut(s) 567
DpnII GATC 1 cut(s) 565
DraI TTTAAA 1 cut(s) 39
EaeI YGGCCR 1 cut(s) 157
Eco130I CCWWGG 1 cut(s) 665
Eco47I GGWCC 1 cut(s) 662
Eco57I CTGAAG 2 cut(s) 52, 117
EcoRII CCWGG 3 cut(s) 154, 475, 694
EcoT14I CCWWGG 1 cut(s) 665
ErhI CCWWGG 1 cut(s) 665
FaeI CATG 5 cut(s) 52, 502, 669, 940, 958
FaqI GGGAC 1 cut(s) 150
FatI CATG 5 cut(s) 48, 498, 665, 936, 954
FblI GTMKAC 2 cut(s) 691, 837
Fnu4HI GCNGC 2 cut(s) 316, 399
FokI GGATG 1 cut(s) 229
Fsp4HI GCNGC 2 cut(s) 316, 399
FspBI CTAG 1 cut(s) 146
GluI GCNGC 2 cut(s) 316, 399
GsaI CCCAGC 1 cut(s) 509
GsuI CTGGAG 2 cut(s) 350, 673
HaeIII GGCC 2 cut(s) 159, 931
HapII CCGG 1 cut(s) 941
Hin1II CATG 5 cut(s) 52, 502, 669, 940, 958
HincII GTYRAC 3 cut(s) 366, 384, 543
HindII GTYRAC 3 cut(s) 366, 384, 543
HinfI GANTC 4 cut(s) 18, 112, 482, 535
HpaII CCGG 1 cut(s) 941
HphI GGTGA 1 cut(s) 491
Hpy166II GTNNAC 8 cut(s) 366, 384, 543, 692, 815, 838, 908, 980
Hpy188I TCNGA 2 cut(s) 612, 871
Hpy188III TCNNGA 4 cut(s) 214, 329, 628, 1059
Hpy8I GTNNAC 8 cut(s) 366, 384, 543, 692, 815, 838, 908, 980
HpyAV CCTTC 3 cut(s) 126, 1035, 1082
HpyCH4III ACNGT 2 cut(s) 977, 1038
HpyCH4V TGCA 4 cut(s) 281, 401, 560, 889
HpyF10VI GCNNNNNNNGC 2 cut(s) 895, 937
HpyF3I CTNAG 3 cut(s) 110, 716, 959
Hsp92II CATG 5 cut(s) 52, 502, 669, 940, 958
Kzo9I GATC 1 cut(s) 565
LmnI GCTCC 3 cut(s) 331, 446, 638
Lsp1109I GCAGC 2 cut(s) 327, 385
LweI GCATC 1 cut(s) 872
MaeI CTAG 1 cut(s) 146
MaeIII GTNAC 3 cut(s) 283, 479, 965
MalI GATC 1 cut(s) 567
MboI GATC 1 cut(s) 565
MboII GAAGA 1 cut(s) 58
MfeI CAATTG 1 cut(s) 765
MlsI TGGCCA 1 cut(s) 159
MluCI AATT 7 cut(s) 40, 162, 170, 193, 246, 765, 785
MluNI TGGCCA 1 cut(s) 159
MlyI GAGTC 2 cut(s) 121, 476
MmeI TCCRAC 2 cut(s) 571, 635
MnlI CCTC 3 cut(s) 55, 91, 300
Mox20I TGGCCA 1 cut(s) 159
MscI TGGCCA 1 cut(s) 159
MseI TTAA 1 cut(s) 38
Msp20I TGGCCA 1 cut(s) 159
MspI CCGG 1 cut(s) 941
MspR9I CCNGG 3 cut(s) 156, 477, 696
MunI CAATTG 1 cut(s) 765
MvaI CCWGG 3 cut(s) 156, 477, 696
MwoI GCNNNNNNNGC 2 cut(s) 895, 937
NcoI CCATGG 1 cut(s) 665
NdeII GATC 1 cut(s) 565
NlaIII CATG 5 cut(s) 52, 502, 669, 940, 958
NlaIV GGNNCC 1 cut(s) 421
NmuCI GTSAC 1 cut(s) 479
NspI RCATGY 2 cut(s) 502, 940
NspV TTCGAA 1 cut(s) 783
PaeI GCATGC 1 cut(s) 940
PfeI GAWTC 2 cut(s) 18, 535
PflMI CCANNNNNTGG 1 cut(s) 575
PkrI GCNGC 2 cut(s) 317, 400
PleI GAGTC 2 cut(s) 120, 476
PpsI GAGTC 2 cut(s) 120, 476
Psp6I CCWGG 3 cut(s) 154, 475, 694
PspFI CCCAGC 1 cut(s) 505
PspGI CCWGG 3 cut(s) 154, 475, 694
PspN4I GGNNCC 1 cut(s) 421
PspPI GGNCC 1 cut(s) 662
PstI CTGCAG 2 cut(s) 403, 891
RsaI GTAC 3 cut(s) 706, 909, 1051
RsaNI GTAC 3 cut(s) 705, 908, 1050
SaqAI TTAA 1 cut(s) 38
SatI GCNGC 2 cut(s) 316, 399
Sau3AI GATC 1 cut(s) 565
Sau96I GGNCC 1 cut(s) 662
ScaI AGTACT 2 cut(s) 706, 1051
SchI GAGTC 2 cut(s) 121, 476
ScrFI CCNGG 3 cut(s) 156, 477, 696
SfaNI GCATC 1 cut(s) 872
SfcI CTRYAG 2 cut(s) 399, 887
SfuI TTCGAA 1 cut(s) 783
SinI GGWCC 1 cut(s) 662
SphI GCATGC 1 cut(s) 940
Sse9I AATT 7 cut(s) 40, 162, 170, 193, 246, 765, 785
SspI AATATT 1 cut(s) 89
SspMI CTAG 1 cut(s) 146
StyD4I CCNGG 3 cut(s) 154, 475, 694
StyI CCWWGG 1 cut(s) 665
TaaI ACNGT 2 cut(s) 977, 1038
TaqI TCGA 2 cut(s) 783, 1086
TasI AATT 7 cut(s) 40, 162, 170, 193, 246, 765, 785
TatI WGTACW 3 cut(s) 704, 907, 1049
TfiI GAWTC 2 cut(s) 18, 535
Tru1I TTAA 1 cut(s) 38
Tru9I TTAA 1 cut(s) 38
TscAI CASTG 1 cut(s) 656
TseFI GTSAC 1 cut(s) 479
TseI GCWGC 2 cut(s) 315, 398
Tsp45I GTSAC 1 cut(s) 479
TspDTI ATGAA 5 cut(s) 52, 613, 943, 1004, 1080
TspRI CASTG 1 cut(s) 656
Van91I CCANNNNNTGG 1 cut(s) 575
VpaK11BI GGWCC 1 cut(s) 662
XapI RAATTY 3 cut(s) 40, 162, 785
XceI RCATGY 2 cut(s) 502, 940
XcmI CCANNNNNNNNNTGG 1 cut(s) 656
XmiI GTMKAC 2 cut(s) 691, 837
XspI CTAG 1 cut(s) 146
ZrmI AGTACT 2 cut(s) 706, 1051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.