Rh5CG080400

Serine threonine-protein kinase-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
N/A
Physical Location & Seq
Reverse (-)
6149158 .. 6151121
1964 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG080400.1

Sequence Viewer

Length: 858 bp
ATGGAGTTTGTAGGTATGGTTTGCTTGGATTTTTACTTGCATCAAAACCCAGATGGGGCTTCTCTGTTGGATTGGAACCGCAGGCTTAAAATTGCAGCAGGGGCAGCAAGAGGGCTTCAGTACTTGCATCAAGGAGTTGCTCCAAATATTGTTCATGGATTTGTGAAGGCTTCAAATATCTTGATTGATGTGAAATTCTGTGCTAGGGTTTGTGATTATGGTCTATCATTTTTGGCACCAAAAGAGAAGAGGGGTCTAGTTGGTCATGTGGATGATGAGTATTGGAGAGGAGGTGGTGTGTGCAAAGAGAGCGATATGTTTGGTTTTGGGGTGGTTCTGTTGGAACTTCTGAGTGGGAGACGATGTGATGAAGGGTTTCTAGTGAAATGGGCAATGCCATTGATTCAGGAGATGAGGTTTACTGAGTTTTTGGACCCAAGACTTGTTATTCCTCATGACATTAGGCCTCTTGTCAGATTGACCAAAGTTGCCTCGACTTGTGTTATTTTCACACTTGGAAGAAGCTTATTGATTCGACAATTTGATCTGAGAAGCAACTCTGTTATGGAGCTACTTCGTTGCACCCCATTATTGACAAAACAGAAGCACATCAAAGAGAGGGTAGAGGTGTATGACATGGGTAGTGCTAGATCACGTGGTCTAGATCATGTAGAGCCGCATCCACATTTTCCTACTCTTGCAAGTTCTGAATCAGATAGGTGTGTAAAGCTCTGGGGTCCTATGGCAAATGATGCTCTACCACCGCCTTACCCACACAACATAGAAAAGATTATGAAGTCCAATGGAGCAAGGAGAGATGAGTTTCTGCAGACGATGGCCAACATTTACAACAGATGA

Protein Analysis

285

Amino Acids

32.37

Weight (kDa)

8.75

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 1 - 119 5.5e-13 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 29 - 120 1.7e-09 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 235
AciI CCGC 3 cut(s) 79, 677, 764
AcoI YGGCCR 1 cut(s) 837
AcsI RAATTY 1 cut(s) 194
AcuI CTGAAG 1 cut(s) 101
AcvI CACGTG 1 cut(s) 656
AfaI GTAC 1 cut(s) 122
AfiI CCNNNNNNNGG 1 cut(s) 55
AgsI TTSAA 1 cut(s) 174
AluBI AGCT 3 cut(s) 525, 571, 730
AluI AGCT 3 cut(s) 525, 571, 730
Alw26I GTCTC 1 cut(s) 352
AoxI GGCC 2 cut(s) 464, 837
ApeKI GCWGC 2 cut(s) 95, 104
ApoI RAATTY 1 cut(s) 194
Asp700I GAANNNNTTC 1 cut(s) 375
AspS9I GGNCC 2 cut(s) 433, 737
AvaII GGWCC 2 cut(s) 433, 737
BalI TGGCCA 1 cut(s) 839
BanI GGYRCC 1 cut(s) 235
BbrPI CACGTG 1 cut(s) 656
BbvI GCAGC 2 cut(s) 107, 116
BccI CCATC 2 cut(s) 47, 829
BcoDI GTCTC 1 cut(s) 352
BfaI CTAG 5 cut(s) 204, 257, 380, 648, 662
BfmI CTRYAG 1 cut(s) 827
BisI GCNGC 3 cut(s) 96, 105, 677
BlsI GCNGC 3 cut(s) 97, 106, 678
BmcAI AGTACT 1 cut(s) 122
Bme18I GGWCC 2 cut(s) 433, 737
BmgT120I GGNCC 2 cut(s) 433, 737
BmiI GGNNCC 4 cut(s) 77, 237, 435, 738
BmsI GCATC 4 cut(s) 49, 136, 688, 742
BsaAI YACGTR 1 cut(s) 656
BsaXI ACNNNNNCTCC 8 cut(s) 277, 282, 307, 312, 349, 379, 401, 431
Bsc4I CCNNNNNNNGG 1 cut(s) 55
Bse3DI GCAATG 1 cut(s) 399
BseGI GGATG 2 cut(s) 277, 679
BseLI CCNNNNNNNGG 1 cut(s) 55
BseMI GCAATG 1 cut(s) 399
BseMII CTCAG 3 cut(s) 341, 414, 539
BseRI GAGGAG 1 cut(s) 303
BseXI GCAGC 2 cut(s) 107, 116
BshFI GGCC 2 cut(s) 466, 839
BshNI GGYRCC 1 cut(s) 235
BslI CCNNNNNNNGG 1 cut(s) 55
BsmAI GTCTC 1 cut(s) 352
BsmBI CGTCTC 1 cut(s) 352
BsnI GGCC 2 cut(s) 466, 839
Bsp143I GATC 3 cut(s) 544, 650, 664
BspACI CCGC 3 cut(s) 79, 677, 764
BspANI GGCC 2 cut(s) 466, 839
BspCNI CTCAG 3 cut(s) 342, 415, 540
BspHI TCATGA 1 cut(s) 454
BspLI GGNNCC 4 cut(s) 77, 237, 435, 738
BspMAI CTGCAG 1 cut(s) 831
BspT107I GGYRCC 1 cut(s) 235
BsrDI GCAATG 1 cut(s) 399
BssMI GATC 3 cut(s) 544, 650, 664
Bst6I CTCTTC 1 cut(s) 242
BstAPI GCANNNNNTGC 1 cut(s) 752
BstBAI YACGTR 1 cut(s) 656
BstC8I GCNNGC 1 cut(s) 83
BstDEI CTNAG 3 cut(s) 350, 423, 548
BstF5I GGATG 2 cut(s) 277, 679
BstKTI GATC 3 cut(s) 547, 653, 667
BstMAI GTCTC 1 cut(s) 352
BstMBI GATC 3 cut(s) 544, 650, 664
BstMWI GCNNNNNNNGC 4 cut(s) 101, 104, 309, 752
BstSFI CTRYAG 1 cut(s) 827
BstV1I GCAGC 2 cut(s) 107, 116
BsuRI GGCC 2 cut(s) 466, 839
BtsCI GGATG 2 cut(s) 277, 679
Cac8I GCNNGC 1 cut(s) 83
CciI TCATGA 1 cut(s) 454
Cfr13I GGNCC 2 cut(s) 433, 737
Csp6I GTAC 1 cut(s) 121
CviAII CATG 5 cut(s) 155, 266, 455, 637, 668
CviQI GTAC 1 cut(s) 121
DdeI CTNAG 3 cut(s) 350, 423, 548
DpnI GATC 3 cut(s) 546, 652, 666
DpnII GATC 3 cut(s) 544, 650, 664
EaeI YGGCCR 1 cut(s) 837
Eam1104I CTCTTC 1 cut(s) 242
EarI CTCTTC 1 cut(s) 242
Eco147I AGGCCT 1 cut(s) 466
Eco47I GGWCC 2 cut(s) 433, 737
Eco57I CTGAAG 1 cut(s) 101
Eco72I CACGTG 1 cut(s) 656
EcoO109I RGGNCCY 1 cut(s) 737
Esp3I CGTCTC 1 cut(s) 352
FaeI CATG 5 cut(s) 158, 269, 458, 640, 671
FatI CATG 5 cut(s) 154, 265, 454, 636, 667
Fnu4HI GCNGC 3 cut(s) 96, 105, 677
FokI GGATG 2 cut(s) 284, 666
Fsp4HI GCNGC 3 cut(s) 96, 105, 677
FspBI CTAG 5 cut(s) 204, 257, 380, 648, 662
GluI GCNGC 3 cut(s) 96, 105, 677
HaeIII GGCC 2 cut(s) 466, 839
Hin1II CATG 5 cut(s) 158, 269, 458, 640, 671
HindIII AAGCTT 1 cut(s) 523
HinfI GANTC 3 cut(s) 403, 532, 710
Hpy166II GTNNAC 1 cut(s) 420
Hpy188I TCNGA 5 cut(s) 351, 476, 549, 709, 715
Hpy188III TCNNGA 4 cut(s) 181, 407, 455, 662
Hpy8I GTNNAC 1 cut(s) 420
HpyAV CCTTC 2 cut(s) 160, 365
HpyCH4IV ACGT 1 cut(s) 655
HpyCH4V TGCA 7 cut(s) 40, 95, 127, 303, 582, 701, 829
HpyF10VI GCNNNNNNNGC 4 cut(s) 101, 104, 309, 752
HpyF3I CTNAG 3 cut(s) 350, 423, 548
HpySE526I ACGT 1 cut(s) 655
Hsp92II CATG 5 cut(s) 158, 269, 458, 640, 671
Kzo9I GATC 3 cut(s) 544, 650, 664
LmnI GCTCC 3 cut(s) 145, 568, 806
LpnPI CCDG 5 cut(s) 63, 67, 84, 392, 718
Lsp1109I GCAGC 2 cut(s) 107, 116
LweI GCATC 4 cut(s) 49, 136, 688, 742
MaeI CTAG 5 cut(s) 204, 257, 380, 648, 662
MaeII ACGT 1 cut(s) 655
MalI GATC 3 cut(s) 546, 652, 666
MboI GATC 3 cut(s) 544, 650, 664
MboII GAAGA 2 cut(s) 259, 531
MlsI TGGCCA 1 cut(s) 839
MluCI AATT 3 cut(s) 90, 194, 539
MluNI TGGCCA 1 cut(s) 839
MmeI TCCRAC 2 cut(s) 48, 321
Mox20I TGGCCA 1 cut(s) 839
MroXI GAANNNNTTC 1 cut(s) 375
MscI TGGCCA 1 cut(s) 839
MseI TTAA 1 cut(s) 87
MslI CAYNNNNRTG 1 cut(s) 270
Msp20I TGGCCA 1 cut(s) 839
MwoI GCNNNNNNNGC 4 cut(s) 101, 104, 309, 752
NdeII GATC 3 cut(s) 544, 650, 664
NlaIII CATG 5 cut(s) 158, 269, 458, 640, 671
NlaIV GGNNCC 4 cut(s) 77, 237, 435, 738
PagI TCATGA 1 cut(s) 454
PceI AGGCCT 1 cut(s) 466
PdmI GAANNNNTTC 1 cut(s) 375
PfeI GAWTC 3 cut(s) 403, 532, 710
PkrI GCNGC 3 cut(s) 97, 106, 678
PmaCI CACGTG 1 cut(s) 656
PmlI CACGTG 1 cut(s) 656
Ppu21I YACGTR 1 cut(s) 656
PpuMI RGGWCCY 1 cut(s) 737
Psp5II RGGWCCY 1 cut(s) 737
PspCI CACGTG 1 cut(s) 656
PspN4I GGNNCC 4 cut(s) 77, 237, 435, 738
PspPI GGNCC 2 cut(s) 433, 737
PspPPI RGGWCCY 1 cut(s) 737
PstI CTGCAG 1 cut(s) 831
RsaI GTAC 1 cut(s) 122
RsaNI GTAC 1 cut(s) 121
RseI CAYNNNNRTG 1 cut(s) 270
SaqAI TTAA 1 cut(s) 87
SatI GCNGC 3 cut(s) 96, 105, 677
Sau3AI GATC 3 cut(s) 544, 650, 664
Sau96I GGNCC 2 cut(s) 433, 737
ScaI AGTACT 1 cut(s) 122
SetI ASST 9 cut(s) 16, 295, 419, 527, 573, 630, 658, 722, 732
SfaNI GCATC 4 cut(s) 49, 136, 688, 742
SfcI CTRYAG 1 cut(s) 827
SinI GGWCC 2 cut(s) 433, 737
SmiMI CAYNNNNRTG 1 cut(s) 270
Sse9I AATT 3 cut(s) 90, 194, 539
SseBI AGGCCT 1 cut(s) 466
SsiI CCGC 3 cut(s) 79, 677, 764
SspI AATATT 1 cut(s) 148
SspMI CTAG 5 cut(s) 204, 257, 380, 648, 662
StuI AGGCCT 1 cut(s) 466
TaiI ACGT 1 cut(s) 658
TaqI TCGA 2 cut(s) 494, 535
TasI AATT 3 cut(s) 90, 194, 539
TatI WGTACW 1 cut(s) 120
TauI GCSGC 1 cut(s) 679
TfiI GAWTC 3 cut(s) 403, 532, 710
Tru1I TTAA 1 cut(s) 87
Tru9I TTAA 1 cut(s) 87
TseI GCWGC 2 cut(s) 95, 104
TspDTI ATGAA 3 cut(s) 143, 384, 809
VpaK11BI GGWCC 2 cut(s) 433, 737
XapI RAATTY 1 cut(s) 194
XbaI TCTAGA 1 cut(s) 661
XmnI GAANNNNTTC 1 cut(s) 375
XspI CTAG 5 cut(s) 204, 257, 380, 648, 662
ZrmI AGTACT 1 cut(s) 122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.