Rh5CG344400

CBL-interacting serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
N/A
Physical Location & Seq
Forward (+)
39615263 .. 39622372
7110 bp
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UTR
Exon/CDS
Intron
Rh5CG344400.1

Sequence Viewer

Length: 261 bp
ATGCCATCTGAAGGGGAGAAGAGTCCAGATTTGCGGCACTCACCCACCCTTATCAATGCCTTTCAGTTGATTAGAATGTCCACATGTGTAGACCTCTCTGGCTTCTTTGATAAAAGAGAGGTTCTTGAATTATGGAGAAATGCTGATATATATGGTGTAATATCAGAGTTCACCACCTACCATACAGTGGTATGTGGAGAAAGCTCTAATGGGAGTAGCGAAGCTGGAATGGAAGGATCTTCATTTGGTTGGTGCAAGTAG

Protein Analysis

86

Amino Acids

9.54

Weight (kDa)

4.8

Isoelectric Point (pI)

54.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAF PF03822 15 - 61 7.9e-09 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 187
AccI GTMKAC 1 cut(s) 90
AciI CCGC 1 cut(s) 34
AclWI GGATC 1 cut(s) 244
AcuI CTGAAG 1 cut(s) 30
AfiI CCNNNNNNNGG 2 cut(s) 11, 187
AflIII ACRYGT 1 cut(s) 83
AgsI TTSAA 1 cut(s) 128
AluBI AGCT 2 cut(s) 204, 224
AluI AGCT 2 cut(s) 204, 224
AlwI GGATC 1 cut(s) 244
AsuHPI GGTGA 2 cut(s) 33, 163
BccI CCATC 1 cut(s) 13
BisI GCNGC 1 cut(s) 35
BlsI GCNGC 1 cut(s) 36
Bsc4I CCNNNNNNNGG 2 cut(s) 11, 187
BseLI CCNNNNNNNGG 2 cut(s) 11, 187
BslI CCNNNNNNNGG 2 cut(s) 11, 187
Bsp143I GATC 1 cut(s) 236
BspACI CCGC 1 cut(s) 34
BspPI GGATC 1 cut(s) 244
BssMI GATC 1 cut(s) 236
Bst4CI ACNGT 1 cut(s) 187
Bst6I CTCTTC 1 cut(s) 14
BstKTI GATC 1 cut(s) 239
BstMBI GATC 1 cut(s) 236
BstNSI RCATGY 1 cut(s) 87
BstX2I RGATCY 1 cut(s) 236
BstYI RGATCY 1 cut(s) 236
BtsIMutI CAGTG 1 cut(s) 192
CviAII CATG 1 cut(s) 84
CviJI RGCY 3 cut(s) 102, 204, 224
CviKI_1 RGCY 3 cut(s) 102, 204, 224
DpnI GATC 1 cut(s) 238
DpnII GATC 1 cut(s) 236
Eam1104I CTCTTC 1 cut(s) 14
EarI CTCTTC 1 cut(s) 14
Eco57I CTGAAG 1 cut(s) 30
FaeI CATG 1 cut(s) 87
FaiI YATR 7 cut(s) 85, 133, 149, 151, 153, 183, 193
FatI CATG 1 cut(s) 83
FblI GTMKAC 1 cut(s) 90
Fnu4HI GCNGC 1 cut(s) 35
Fsp4HI GCNGC 1 cut(s) 35
GluI GCNGC 1 cut(s) 35
Hin1II CATG 1 cut(s) 87
HinfI GANTC 1 cut(s) 22
HphI GGTGA 2 cut(s) 33, 163
Hpy166II GTNNAC 3 cut(s) 81, 91, 171
Hpy188I TCNGA 2 cut(s) 10, 166
Hpy188III TCNNGA 2 cut(s) 26, 125
Hpy8I GTNNAC 3 cut(s) 81, 91, 171
HpyAV CCTTC 2 cut(s) 5, 227
HpyCH4III ACNGT 1 cut(s) 187
HpyCH4V TGCA 1 cut(s) 255
Hsp92II CATG 1 cut(s) 87
Kzo9I GATC 1 cut(s) 236
LpnPI CCDG 3 cut(s) 39, 84, 210
MalI GATC 1 cut(s) 238
MboI GATC 1 cut(s) 236
MboII GAAGA 2 cut(s) 31, 231
MflI RGATCY 1 cut(s) 236
MluCI AATT 1 cut(s) 128
MlyI GAGTC 1 cut(s) 31
MnlI CCTC 2 cut(s) 104, 112
NdeII GATC 1 cut(s) 236
NlaIII CATG 1 cut(s) 87
NspI RCATGY 1 cut(s) 87
PciI ACATGT 1 cut(s) 83
PflMI CCANNNNNTGG 1 cut(s) 187
PkrI GCNGC 1 cut(s) 36
PleI GAGTC 1 cut(s) 30
PpsI GAGTC 1 cut(s) 30
PscI ACATGT 1 cut(s) 83
PsuI RGATCY 1 cut(s) 236
SatI GCNGC 1 cut(s) 35
Sau3AI GATC 1 cut(s) 236
SchI GAGTC 1 cut(s) 31
SetI ASST 5 cut(s) 96, 123, 179, 206, 226
SgeI CNNG 5 cut(s) 38, 96, 111, 137, 237
Sse9I AATT 1 cut(s) 128
SsiI CCGC 1 cut(s) 34
TaaI ACNGT 1 cut(s) 187
TasI AATT 1 cut(s) 128
TauI GCSGC 1 cut(s) 37
TscAI CASTG 1 cut(s) 192
TspDTI ATGAA 1 cut(s) 231
TspRI CASTG 1 cut(s) 192
Van91I CCANNNNNTGG 1 cut(s) 187
XceI RCATGY 1 cut(s) 87
XmiI GTMKAC 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.