Rh5CG555700

Bulb-type mannose-specific lectin

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
N/A
Physical Location & Seq
Reverse (-)
77359919 .. 77368723
8805 bp
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UTR
Exon/CDS
Intron
Rh5CG555700.1

Sequence Viewer

Length: 249 bp
ATGGGGATCGGATATCAAGTCATCTTCAACCAGACTGGAGCTATTTACCTTGTTAGCAAGAACGGAAGCATACTTACTGCTGTACTAAACAATACAGCTTCAACCATGGGGTTCTACCGCAGAGTAACTCTTGACTATGATGGAGTGTTGAGGTTTGAGATTCTACAAGCCAAGCATCCCCTGCTGGTTCCCGCATACCATTTTAAAGCTAATAGGCCTTCTTCATATATACAAAGTACTGCTGACTAA

Protein Analysis

82

Amino Acids

9.13

Weight (kDa)

9.45

Isoelectric Point (pI)

39.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 118, 192
AclWI GGATC 1 cut(s) 14
AfaI GTAC 2 cut(s) 84, 238
AgsI TTSAA 2 cut(s) 28, 102
AluBI AGCT 3 cut(s) 41, 98, 209
AluI AGCT 3 cut(s) 41, 98, 209
AlwI GGATC 1 cut(s) 14
AoxI GGCC 1 cut(s) 215
BarI GAAGNNNNNNTAC 2 cut(s) 58, 90
BccI CCATC 1 cut(s) 134
BmcAI AGTACT 1 cut(s) 238
BmiI GGNNCC 1 cut(s) 189
BmsI GCATC 1 cut(s) 184
BpmI CTGGAG 1 cut(s) 57
BsaJI CCNNGG 1 cut(s) 105
Bse1I ACTGG 1 cut(s) 40
BseDI CCNNGG 1 cut(s) 105
BseGI GGATG 1 cut(s) 175
BseNI ACTGG 1 cut(s) 40
BshFI GGCC 1 cut(s) 217
BsnI GGCC 1 cut(s) 217
Bsp143I GATC 1 cut(s) 6
Bsp19I CCATGG 1 cut(s) 105
BspACI CCGC 2 cut(s) 118, 192
BspANI GGCC 1 cut(s) 217
BspLI GGNNCC 1 cut(s) 189
BspPI GGATC 1 cut(s) 14
BsrI ACTGG 1 cut(s) 40
BssECI CCNNGG 1 cut(s) 105
BssMI GATC 1 cut(s) 6
BssT1I CCWWGG 1 cut(s) 105
BstAPI GCANNNNNTGC 1 cut(s) 181
BstDSI CCRYGG 1 cut(s) 105
BstF5I GGATG 1 cut(s) 175
BstKTI GATC 1 cut(s) 9
BstMBI GATC 1 cut(s) 6
BstMWI GCNNNNNNNGC 1 cut(s) 181
BsuRI GGCC 1 cut(s) 217
BtgI CCRYGG 1 cut(s) 105
BtsCI GGATG 1 cut(s) 175
Csp6I GTAC 2 cut(s) 83, 237
CviAII CATG 1 cut(s) 106
CviJI RGCY 5 cut(s) 41, 98, 170, 209, 217
CviKI_1 RGCY 5 cut(s) 41, 98, 170, 209, 217
CviQI GTAC 2 cut(s) 83, 237
DpnI GATC 1 cut(s) 8
DpnII GATC 1 cut(s) 6
DraI TTTAAA 1 cut(s) 205
Eco130I CCWWGG 1 cut(s) 105
Eco147I AGGCCT 1 cut(s) 217
Eco32I GATATC 1 cut(s) 14
EcoRV GATATC 1 cut(s) 14
EcoT14I CCWWGG 1 cut(s) 105
ErhI CCWWGG 1 cut(s) 105
FaeI CATG 1 cut(s) 109
FaiI YATR 7 cut(s) 71, 107, 138, 196, 226, 228, 230
FatI CATG 1 cut(s) 105
FauI CCCGC 1 cut(s) 199
FokI GGATG 1 cut(s) 162
GsuI CTGGAG 1 cut(s) 57
HaeIII GGCC 1 cut(s) 217
Hin1II CATG 1 cut(s) 109
HinfI GANTC 1 cut(s) 160
Hpy188I TCNGA 1 cut(s) 11
Hpy188III TCNNGA 1 cut(s) 131
HpyAV CCTTC 1 cut(s) 228
HpyF10VI GCNNNNNNNGC 1 cut(s) 181
Hsp92II CATG 1 cut(s) 109
Kzo9I GATC 1 cut(s) 6
LmnI GCTCC 1 cut(s) 38
LpnPI CCDG 4 cut(s) 21, 44, 170, 194
LweI GCATC 1 cut(s) 184
MaeIII GTNAC 1 cut(s) 124
MalI GATC 1 cut(s) 8
MboI GATC 1 cut(s) 6
MboII GAAGA 2 cut(s) 16, 213
MnlI CCTC 1 cut(s) 144
MseI TTAA 1 cut(s) 204
MwoI GCNNNNNNNGC 1 cut(s) 181
NcoI CCATGG 1 cut(s) 105
NdeII GATC 1 cut(s) 6
NlaIII CATG 1 cut(s) 109
NlaIV GGNNCC 1 cut(s) 189
PceI AGGCCT 1 cut(s) 217
PfeI GAWTC 1 cut(s) 160
PspN4I GGNNCC 1 cut(s) 189
RsaI GTAC 2 cut(s) 84, 238
RsaNI GTAC 2 cut(s) 83, 237
SaqAI TTAA 1 cut(s) 204
Sau3AI GATC 1 cut(s) 6
ScaI AGTACT 1 cut(s) 238
SetI ASST 5 cut(s) 43, 51, 100, 155, 211
SfaNI GCATC 1 cut(s) 184
SseBI AGGCCT 1 cut(s) 217
SsiI CCGC 2 cut(s) 118, 192
StuI AGGCCT 1 cut(s) 217
StyI CCWWGG 1 cut(s) 105
TatI WGTACW 2 cut(s) 82, 236
TfiI GAWTC 1 cut(s) 160
Tru1I TTAA 1 cut(s) 204
Tru9I TTAA 1 cut(s) 204
TspDTI ATGAA 1 cut(s) 213
TspGWI ACGGA 1 cut(s) 78
ZrmI AGTACT 1 cut(s) 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.