Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

9094005 .. 9096161

Gene Structure 2157 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG099100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGAGTCTCATAGTGTCAGTTTGGTCATAGTCATAGTCTGTTCTGTTCTACTTGCTGGTCTGTCTGCTCAGCCAAGCTTGGAGGTTGAAGTCGAGGCCTTGAAGGCATTCAAGAAATCCATCACCAGCGACCCGAATGGAACACTTGCAGATTGGACGTCAGACGCAAGCCATCACTGCAATTGGTCTGGCATTGCCTGTGACCCCTCAACAAATCAAGTCATTTCAATTTCTCTGGTGGAAAAGCAGCTCACAGGCGTGATCTCACCCTTCCTCGGAAACATTTCAGGCCTCCAGGTTCTTGATCTAACTTCAAACTCATTCACTGGACATATTCCAGCTGAGCTGGGACTTTGCTCCCAACTTTCTCTACTTGCTCTGTATCAAAATTCTCTTTCGGGTTCAATTCCACCAGAACTAGGAAACCTTAGTAATCTGCAGTTATTAGATTTGGGTGATAACCTTTTGAGTGGAAGCATGCCGGAGAGCATTTGCAACTGTAGAAACTTGTCTTTGTTTGGTGCGGAATTTAATAACCTCACTGGCAAACTCCCTTCAAACATAGGAAATCTTGTTAATCTTGAGCTTCTTATAGCAAGTGGCAACAACTTTGTAGGCTCATTACCTGCTTCCATGGGTAAGTTGGCTGCTTTCAAAGAGGTTGACTTAAGTAAAAACCAGCTGTCCGGTGCAATACCTAGGGAGCTAGGGAATCTGTCAAATTTAGAACAACTGGTAGTGTTTGATAATTCCTTTGTTGGGGGAATCCCTTCTGAACTAAGTCGGTGTAAGAAGCTTGTTAACCTTGAACTTTACGAGAATCATTTCACCGGAAGCATTCCCTCTGAGCTTGGAAGTTTGGTTCATTTAGAAACATTGAGATTGTACAAGAATAGGCTAAACTCTACAATTCCACTCTCCATTTTTCAGCTGAAATCATTAACCCATTTAGGACTTTCAGAAAATGAGTTAACTGGGACAATACCATCCGAGCTTGGATCTTTAAGATCATTGCAAGTATTGACCCTGCACTCCAATAAGTTTACCGGAGAGATCCCCTCATCCTTGACAAGCTTGACAAATCTAACATATCTGTCAATGAGCTTAAATTCTCTAACAGGGGAACTTCCATCAAACATAGGGTTGCTTTATAATCTTAAAAACCTCTCCATGAATGGCAACCTTCTTGAGGGATCCATACCATCTAGTATCACCAACTGTACCAATCTTCAAGTTATAAGCTTGGCTTATAATAGAATAACTGGAAAAATACCTCAGGGTCTGGGGCAGTTGCCGAAGCTTAATTTCCTTTCTGTTGGATCCAATAAATTGTTCGGAGAAATCCCAGATGACCTCTTCAATTGCACTAGTCTTCTCACTCTAGATTTGGGCCTGAACAACTTTAGTGGTTATCTGAAACCCGGATTTGGAAAACTTTCCAATCTCAGGGTTTTGAGAGCCACCTCCAATTCATTTGTCGGACAAATTCCACCAGAGATTGGCCAACTAAACCAACTTATCATCCTCACACTTGCTGAGAATAGATTCTCAGGTCCAGTTCCACCACAGCTGTCTAATCTCTCTCACCTACAAGGGCTATCCCTGCACGACAATGCTTTAGAAGGAGCCATCCCTGAGAAACTTTTTGAGCTAAAAGAGCTAACTGTTCTAGAGTTGCAGCAAAACAAACTGACCGGTCCAATTCCAGATACTGTCTCAAAACTTGAGTTGCTTTCATATTTAAACCTCCAAGGTAATATGCTCAATGGTTCCATTCCGAAAAGCATGGCTCACCTTAATCGGCTAACGACTCTGGATCTCTCTCACAATCATCTCTCAGGACCCATTCCAGGGTCTGTGATCTCAGGGATGAAAAGCATGCAGATATATTTGAATTTCTCATACAATTTCTTGGATGGCAGCATTCCAGACGAGCTTGGCATGTTGGAAATGGTGCAGGCCATTGACATTTCCAACAATAATCTTTCAGGGATGATTCCTGTAGCACTAGAAGGCTGCAGGAATTTGTACTCTCTTGATCTGTCAGGTAACAAACTTTCAGGGCCAATTCAAGCTGAAGTTTTTGCTAAGATGGACACCTTCACAAGCTTGAACCTTTCAAGGAATCACTTAGATGGTGAACTCCCAGAAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006898 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009595 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010359 GO:0012505 GO:0016020 GO:0016043 GO:0016045 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022898 GO:0023052 GO:0031410 GO:0031982 GO:0032409 GO:0032412 GO:0032879 GO:0033036 GO:0033037 GO:0033554 GO:0034762 GO:0034765 GO:0036211 GO:0038023 GO:0042545 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051606 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0060089 GO:0065007 GO:0065009 GO:0070727 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071944 GO:0097708 GO:0098542 GO:0098543 GO:0098581 GO:0098657 GO:0140096 GO:1901564 GO:1903959

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

718

Amino Acids

77.14

Weight (kDa)

5.16

Isoelectric Point (pI)

24.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	30 - 68	1.1e-11	Leucine rich repeat N-terminal domain
LRR_14	PF23598	75 - 172	1e-05	Leucine-rich repeat region
LRR_14	PF23598	182 - 272	1.3e-06	Leucine-rich repeat region
LRR_14	PF23598	268 - 371	5e-11	Leucine-rich repeat region
LRR_8	PF13855	289 - 348	3.1e-07	Leucine rich repeat
LRR_14	PF23598	317 - 391	3.5e-07	Leucine-rich repeat region
LRR_14	PF23598	379 - 488	7.5e-08	Leucine-rich repeat region
LRR_8	PF13855	385 - 444	1.6e-07	Leucine rich repeat
LRR_14	PF23598	472 - 561	1.7e-07	Leucine-rich repeat region
LRR_8	PF13855	553 - 612	3e-09	Leucine rich repeat
LRR_8	PF13855	653 - 711	2.6e-08	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1152, 1238, 1251
AatII	GACGTC	1 cut(s)	161
Acc36I	ACCTGC	1 cut(s)	634
AccB7I	CCANNNNNTGG	1 cut(s)	1499
AciI	CCGC	1 cut(s)	524
AclWI	GGATC	7 cut(s)	1006, 1048, 1188, 1201, 1314, 1327, 1824
AcoI	YGGCCR	1 cut(s)	1501
AcsI	RAATTY	7 cut(s)	388, 527, 721, 1108, 1485, 1894, 2023
AcuI	CTGAAG	1 cut(s)	2097
AcyI	GRCGYC	1 cut(s)	158
AfaI	GTAC	3 cut(s)	887, 1222, 2030
AfiI	CCNNNNNNNGG	9 cut(s)	275, 419, 759, 1189, 1427, 1446, 1499, 1850, 1851
AflII	CTTAAG	1 cut(s)	667
AgeI	ACCGGT	1 cut(s)	1694
AhlI	ACTAGT	1 cut(s)	1367
AjnI	CCWGG	2 cut(s)	294, 1849
AjuI	GAANNNNNNNTTGG	2 cut(s)	1316, 1348
AleI	CACNNNNGTG	1 cut(s)	257
AloI	GAACNNNNNNTCC	2 cut(s)	846, 878
Alw26I	GTCTC	2 cut(s)	12, 1720
AlwI	GGATC	7 cut(s)	1006, 1048, 1188, 1201, 1314, 1327, 1824
AlwNI	CAGNNNCTG	3 cut(s)	1282, 1712, 1856
AoxI	GGCC	6 cut(s)	96, 289, 1390, 1501, 1959, 2063
ApeKI	GCWGC	5 cut(s)	247, 647, 1678, 1920, 2016
ApoI	RAATTY	7 cut(s)	388, 527, 721, 1108, 1485, 1894, 2023
AsiGI	ACCGGT	1 cut(s)	1694
Asp700I	GAANNNNTTC	6 cut(s)	107, 283, 769, 824, 1435, 1544
AspA2I	CCTAGG	1 cut(s)	698
AspS9I	GGNCC	5 cut(s)	1390, 1553, 1697, 1841, 2063
AsuC2I	CCSGG	1 cut(s)	1422
AsuHPI	GGTGA	8 cut(s)	115, 258, 467, 820, 1204, 1577, 1784, 2150
AvaII	GGWCC	3 cut(s)	1553, 1697, 1841
AvrII	CCTAGG	1 cut(s)	698
AxyI	CCTNAGG	1 cut(s)	1275
BalI	TGGCCA	1 cut(s)	1503
BamHI	GGATCC	2 cut(s)	1193, 1319
BbsI	GAAGAC	1 cut(s)	1364
BbvI	GCAGC	5 cut(s)	259, 634, 1690, 1932, 2003
BccI	CCATC	9 cut(s)	128, 180, 994, 1138, 1210, 1637, 1910, 2086, 2129
BciT130I	CCWGG	2 cut(s)	296, 1851
BcnI	CCSGG	1 cut(s)	1422
BcoDI	GTCTC	2 cut(s)	12, 1720
BcuI	ACTAGT	1 cut(s)	1367
BfaI	CTAG	8 cut(s)	419, 699, 707, 1206, 1368, 1382, 1670, 2009
BfmI	CTRYAG	4 cut(s)	437, 499, 2001, 2017
BfrI	CTTAAG	1 cut(s)	667
BfuAI	ACCTGC	1 cut(s)	634
BglI	GCCNNNNNGGC	1 cut(s)	104
BisI	GCNGC	5 cut(s)	248, 648, 1679, 1921, 2017
BlnI	CCTAGG	1 cut(s)	698
BlpI	GCTNAGC	2 cut(s)	69, 342
BlsI	GCNGC	5 cut(s)	249, 649, 1680, 1922, 2018
Bme1390I	CCNGG	3 cut(s)	296, 1422, 1851
Bme18I	GGWCC	3 cut(s)	1553, 1697, 1841
BmgT120I	GGNCC	5 cut(s)	1390, 1553, 1697, 1841, 2063
BmiI	GGNNCC	5 cut(s)	1195, 1321, 1627, 1771, 1843
BmrFI	CCNGG	3 cut(s)	296, 1422, 1851
BmrI	ACTGGG	1 cut(s)	984
BmuI	ACTGGG	1 cut(s)	984
BpiI	GAAGAC	1 cut(s)	1364
BplI	GAGNNNNNCTC	2 cut(s)	1043, 1075
BpmI	CTGGAG	1 cut(s)	278
Bpu1102I	GCTNAGC	2 cut(s)	69, 342
BpuEI	CTTGAG	3 cut(s)	602, 1208, 1745
BpuMI	CCSGG	1 cut(s)	1422
BsaHI	GRCGYC	1 cut(s)	158
BsaJI	CCNNGG	5 cut(s)	274, 633, 698, 1750, 1850
BsaWI	WCCGGW	4 cut(s)	686, 830, 1046, 1694
Bsc4I	CCNNNNNNNGG	9 cut(s)	275, 419, 759, 1189, 1427, 1446, 1499, 1850, 1851
Bse118I	RCCGGY	1 cut(s)	1694
Bse1I	ACTGG	6 cut(s)	331, 547, 738, 979, 1267, 1556
Bse21I	CCTNAGG	1 cut(s)	1275
Bse3DI	GCAATG	2 cut(s)	192, 1010
BseBI	CCWGG	2 cut(s)	296, 1851
BseDI	CCNNGG	5 cut(s)	274, 633, 698, 1750, 1850
BseGI	GGATG	7 cut(s)	986, 1061, 1521, 1629, 1875, 1921, 1998
BseLI	CCNNNNNNNGG	9 cut(s)	275, 419, 759, 1189, 1427, 1446, 1499, 1850, 1851
BseMI	GCAATG	2 cut(s)	192, 1010
BseNI	ACTGG	6 cut(s)	331, 547, 738, 979, 1267, 1556
BseXI	GCAGC	5 cut(s)	259, 634, 1690, 1932, 2003
BseYI	CCCAGC	1 cut(s)	346
BsgI	GTGCAG	3 cut(s)	1013, 1589, 1976
BshFI	GGCC	6 cut(s)	98, 291, 1392, 1503, 1961, 2065
BshTI	ACCGGT	1 cut(s)	1694
BsiSI	CCGG	6 cut(s)	482, 687, 831, 1047, 1422, 1695
BslFI	GGGAC	2 cut(s)	363, 991
BslI	CCNNNNNNNGG	9 cut(s)	275, 419, 759, 1189, 1427, 1446, 1499, 1850, 1851
BsmAI	GTCTC	2 cut(s)	12, 1720
BsmFI	GGGAC	2 cut(s)	363, 991
BsmI	GAATGC	3 cut(s)	107, 837, 1923
BsnI	GGCC	6 cut(s)	98, 291, 1392, 1503, 1961, 2065
Bsp1407I	TGTACA	1 cut(s)	885
Bsp1720I	GCTNAGC	2 cut(s)	69, 342
Bsp19I	CCATGG	1 cut(s)	633
BspACI	CCGC	1 cut(s)	524
BspANI	GGCC	6 cut(s)	98, 291, 1392, 1503, 1961, 2065
BspLI	GGNNCC	5 cut(s)	1195, 1321, 1627, 1771, 1843
BspMAI	CTGCAG	2 cut(s)	441, 2021
BspMI	ACCTGC	1 cut(s)	634
BspPI	GGATC	7 cut(s)	1006, 1048, 1188, 1201, 1314, 1327, 1824
BspTI	CTTAAG	1 cut(s)	667
BsrDI	GCAATG	2 cut(s)	192, 1010
BsrFI	RCCGGY	1 cut(s)	1694
BsrGI	TGTACA	1 cut(s)	885
BsrI	ACTGG	6 cut(s)	331, 547, 738, 979, 1267, 1556
BssAI	RCCGGY	1 cut(s)	1694
BssECI	CCNNGG	5 cut(s)	274, 633, 698, 1750, 1850
BssNI	GRCGYC	1 cut(s)	158
BssT1I	CCWWGG	3 cut(s)	633, 698, 1750
Bst2UI	CCWGG	2 cut(s)	296, 1851
Bst4CI	ACNGT	4 cut(s)	500, 1220, 1666, 1714
Bst6I	CTCTTC	1 cut(s)	1361
BstACI	GRCGYC	1 cut(s)	158
BstAFI	CTTAAG	1 cut(s)	667
BstAUI	TGTACA	1 cut(s)	885
BstC8I	GCNNGC	4 cut(s)	169, 479, 1880, 1959
BstDSI	CCRYGG	1 cut(s)	633
BstENI	CCTNNNNNAGG	1 cut(s)	1187
BstF5I	GGATG	7 cut(s)	986, 1061, 1521, 1629, 1875, 1921, 1998
BstMAI	GTCTC	2 cut(s)	12, 1720
BstMWI	GCNNNNNNNGC	4 cut(s)	104, 177, 1603, 1657
BstNI	CCWGG	2 cut(s)	296, 1851
BstNSI	RCATGY	3 cut(s)	481, 1882, 1945
BstSCI	CCNGG	3 cut(s)	294, 1420, 1849
BstSFI	CTRYAG	4 cut(s)	437, 499, 2001, 2017
BstV1I	GCAGC	5 cut(s)	259, 634, 1690, 1932, 2003
BstV2I	GAAGAC	1 cut(s)	1364
BstX2I	RGATCY	5 cut(s)	998, 1053, 1193, 1319, 1816
BstYI	RGATCY	5 cut(s)	998, 1053, 1193, 1319, 1816
Bsu36I	CCTNAGG	1 cut(s)	1275
BsuRI	GGCC	6 cut(s)	98, 291, 1392, 1503, 1961, 2065
BtgI	CCRYGG	1 cut(s)	633
BtsCI	GGATG	7 cut(s)	986, 1061, 1521, 1629, 1875, 1921, 1998
BtsI	GCAGTG	1 cut(s)	175
BtsIMutI	CAGTG	3 cut(s)	175, 324, 540
BveI	ACCTGC	1 cut(s)	634
Cac8I	GCNNGC	4 cut(s)	169, 479, 1880, 1959
CaiI	CAGNNNCTG	3 cut(s)	1282, 1712, 1856
Cfr10I	RCCGGY	1 cut(s)	1694
Cfr13I	GGNCC	5 cut(s)	1390, 1553, 1697, 1841, 2063
CseI	GACGC	1 cut(s)	173
Csp6I	GTAC	3 cut(s)	886, 1221, 2029
CspAI	ACCGGT	1 cut(s)	1694
CspCI	CAANNNNNGTGG	2 cut(s)	1387, 1422
CviAII	CATG	6 cut(s)	478, 634, 1171, 1786, 1879, 1942
CviQI	GTAC	3 cut(s)	886, 1221, 2029
DraI	TTTAAA	1 cut(s)	1743
EaeI	YGGCCR	1 cut(s)	1501
Eam1104I	CTCTTC	1 cut(s)	1361
EarI	CTCTTC	1 cut(s)	1361
Eco130I	CCWWGG	3 cut(s)	633, 698, 1750
Eco147I	AGGCCT	2 cut(s)	98, 291
Eco47I	GGWCC	3 cut(s)	1553, 1697, 1841
Eco57I	CTGAAG	1 cut(s)	2097
Eco81I	CCTNAGG	1 cut(s)	1275
EcoNI	CCTNNNNNAGG	1 cut(s)	1187
EcoO109I	RGGNCCY	1 cut(s)	1841
EcoRII	CCWGG	2 cut(s)	294, 1849
EcoT14I	CCWWGG	3 cut(s)	633, 698, 1750
ErhI	CCWWGG	3 cut(s)	633, 698, 1750
FaeI	CATG	6 cut(s)	481, 637, 1174, 1789, 1882, 1945
FalI	AAGNNNNNCTT	2 cut(s)	1231, 1263
FaqI	GGGAC	2 cut(s)	363, 991
FatI	CATG	6 cut(s)	477, 633, 1170, 1785, 1878, 1941
Fnu4HI	GCNGC	5 cut(s)	248, 648, 1679, 1921, 2017
FokI	GGATG	7 cut(s)	973, 1048, 1508, 1616, 1882, 1928, 2005
Fsp4HI	GCNGC	5 cut(s)	248, 648, 1679, 1921, 2017
FspBI	CTAG	8 cut(s)	419, 699, 707, 1206, 1368, 1382, 1670, 2009
GluI	GCNGC	5 cut(s)	248, 648, 1679, 1921, 2017
GsaI	CCCAGC	1 cut(s)	350
GsuI	CTGGAG	1 cut(s)	278
HaeIII	GGCC	6 cut(s)	98, 291, 1392, 1503, 1961, 2065
HapII	CCGG	6 cut(s)	482, 687, 831, 1047, 1422, 1695
HgaI	GACGC	1 cut(s)	173
Hin1I	GRCGYC	1 cut(s)	158
Hin1II	CATG	6 cut(s)	481, 637, 1174, 1789, 1882, 1945
HincII	GTYRAC	3 cut(s)	664, 802, 972
HindII	GTYRAC	3 cut(s)	664, 802, 972
HindIII	AAGCTT	6 cut(s)	76, 794, 1072, 1240, 1298, 2107
HinfI	GANTC	8 cut(s)	5, 712, 765, 820, 1545, 1810, 1996, 2125
HpaI	GTTAAC	2 cut(s)	802, 972
HpaII	CCGG	6 cut(s)	482, 687, 831, 1047, 1422, 1695
HphI	GGTGA	8 cut(s)	115, 258, 467, 820, 1204, 1577, 1784, 2150
Hpy166II	GTNNAC	5 cut(s)	664, 802, 972, 1044, 2141
Hpy8I	GTNNAC	5 cut(s)	664, 802, 972, 1044, 2141
HpyAV	CCTTC	8 cut(s)	97, 280, 564, 780, 1193, 1616, 2006, 2110
HpyCH4III	ACNGT	4 cut(s)	500, 1220, 1666, 1714
HpyCH4IV	ACGT	1 cut(s)	158
HpyF10VI	GCNNNNNNNGC	4 cut(s)	104, 177, 1603, 1657
HpySE526I	ACGT	1 cut(s)	158
Hsp92I	GRCGYC	1 cut(s)	158
Hsp92II	CATG	6 cut(s)	481, 637, 1174, 1789, 1882, 1945
KspAI	GTTAAC	2 cut(s)	802, 972
LmnI	GCTCC	3 cut(s)	362, 703, 1625
Lsp1109I	GCAGC	5 cut(s)	259, 634, 1690, 1932, 2003
MaeI	CTAG	8 cut(s)	419, 699, 707, 1206, 1368, 1382, 1670, 2009
MaeII	ACGT	1 cut(s)	158
MaeIII	GTNAC	2 cut(s)	200, 2048
MboII	GAAGA	3 cut(s)	1220, 1348, 1364
MfeI	CAATTG	2 cut(s)	181, 1360
MflI	RGATCY	5 cut(s)	998, 1053, 1193, 1319, 1816
MlsI	TGGCCA	1 cut(s)	1503
MluNI	TGGCCA	1 cut(s)	1503
MlyI	GAGTC	2 cut(s)	14, 1804
MmeI	TCCRAC	4 cut(s)	1297, 1459, 1926, 1998
Mox20I	TGGCCA	1 cut(s)	1503
MroXI	GAANNNNTTC	6 cut(s)	107, 283, 769, 824, 1435, 1544
MscI	TGGCCA	1 cut(s)	1503
MslI	CAYNNNNRTG	3 cut(s)	257, 1611, 2133
Msp20I	TGGCCA	1 cut(s)	1503
MspA1I	CMGCKG	4 cut(s)	341, 682, 931, 1570
MspCI	CTTAAG	1 cut(s)	667
MspI	CCGG	6 cut(s)	482, 687, 831, 1047, 1422, 1695
MspR9I	CCNGG	3 cut(s)	296, 1422, 1851
MunI	CAATTG	2 cut(s)	181, 1360
Mva1269I	GAATGC	3 cut(s)	107, 837, 1923
MvaI	CCWGG	2 cut(s)	296, 1851
MwoI	GCNNNNNNNGC	4 cut(s)	104, 177, 1603, 1657
NciI	CCSGG	1 cut(s)	1422
NcoI	CCATGG	1 cut(s)	633
NlaIII	CATG	6 cut(s)	481, 637, 1174, 1789, 1882, 1945
NlaIV	GGNNCC	5 cut(s)	1195, 1321, 1627, 1771, 1843
NmuCI	GTSAC	1 cut(s)	200
NspI	RCATGY	3 cut(s)	481, 1882, 1945
OliI	CACNNNNGTG	1 cut(s)	257
PaeI	GCATGC	2 cut(s)	481, 1882
PceI	AGGCCT	2 cut(s)	98, 291
PctI	GAATGC	3 cut(s)	107, 837, 1923
PdmI	GAANNNNTTC	6 cut(s)	107, 283, 769, 824, 1435, 1544
PfeI	GAWTC	6 cut(s)	712, 765, 820, 1545, 1996, 2125
PflMI	CCANNNNNTGG	1 cut(s)	1499
PinAI	ACCGGT	1 cut(s)	1694
PkrI	GCNGC	5 cut(s)	249, 649, 1680, 1922, 2018
PleI	GAGTC	2 cut(s)	13, 1804
PpsI	GAGTC	2 cut(s)	13, 1804
PpuMI	RGGWCCY	1 cut(s)	1841
PsiI	TTATAA	3 cut(s)	1152, 1238, 1251
Psp5II	RGGWCCY	1 cut(s)	1841
Psp6I	CCWGG	2 cut(s)	294, 1849
PspFI	CCCAGC	1 cut(s)	346
PspGI	CCWGG	2 cut(s)	294, 1849
PspN4I	GGNNCC	5 cut(s)	1195, 1321, 1627, 1771, 1843
PspPI	GGNCC	5 cut(s)	1390, 1553, 1697, 1841, 2063
PspPPI	RGGWCCY	1 cut(s)	1841
PstI	CTGCAG	2 cut(s)	441, 2021
PstNI	CAGNNNCTG	3 cut(s)	1282, 1712, 1856
PsuI	RGATCY	5 cut(s)	998, 1053, 1193, 1319, 1816
PvuII	CAGCTG	4 cut(s)	341, 682, 931, 1570
RsaI	GTAC	3 cut(s)	887, 1222, 2030
RsaNI	GTAC	3 cut(s)	886, 1221, 2029
RseI	CAYNNNNRTG	3 cut(s)	257, 1611, 2133
SatI	GCNGC	5 cut(s)	248, 648, 1679, 1921, 2017
Sau96I	GGNCC	5 cut(s)	1390, 1553, 1697, 1841, 2063
SchI	GAGTC	2 cut(s)	14, 1804
ScrFI	CCNGG	3 cut(s)	296, 1422, 1851
SfcI	CTRYAG	4 cut(s)	437, 499, 2001, 2017
SinI	GGWCC	3 cut(s)	1553, 1697, 1841
SmiMI	CAYNNNNRTG	3 cut(s)	257, 1611, 2133
SmlI	CTYRAG	4 cut(s)	581, 667, 1187, 1724
SmoI	CTYRAG	4 cut(s)	581, 667, 1187, 1724
SpeI	ACTAGT	1 cut(s)	1367
SphI	GCATGC	2 cut(s)	481, 1882
SseBI	AGGCCT	2 cut(s)	98, 291
SsiI	CCGC	1 cut(s)	524
SspMI	CTAG	8 cut(s)	419, 699, 707, 1206, 1368, 1382, 1670, 2009
StuI	AGGCCT	2 cut(s)	98, 291
StyD4I	CCNGG	3 cut(s)	294, 1420, 1849
StyI	CCWWGG	3 cut(s)	633, 698, 1750
TaaI	ACNGT	4 cut(s)	500, 1220, 1666, 1714
TaiI	ACGT	1 cut(s)	161
TaqI	TCGA	1 cut(s)	93
TatI	WGTACW	2 cut(s)	885, 2028
TfiI	GAWTC	6 cut(s)	712, 765, 820, 1545, 1996, 2125
TscAI	CASTG	3 cut(s)	182, 331, 547
TseFI	GTSAC	1 cut(s)	200
TseI	GCWGC	5 cut(s)	247, 647, 1678, 1920, 2016
Tsp45I	GTSAC	1 cut(s)	200
TspDTI	ATGAA	5 cut(s)	854, 1187, 1461, 1725, 1886
TspRI	CASTG	3 cut(s)	182, 331, 547
Van91I	CCANNNNNTGG	1 cut(s)	1499
Vha464I	CTTAAG	1 cut(s)	667
VpaK11BI	GGWCC	3 cut(s)	1553, 1697, 1841
XagI	CCTNNNNNAGG	1 cut(s)	1187
XapI	RAATTY	7 cut(s)	388, 527, 721, 1108, 1485, 1894, 2023
XbaI	TCTAGA	2 cut(s)	1381, 1669
XceI	RCATGY	3 cut(s)	481, 1882, 1945
XcmI	CCANNNNNNNNNTGG	1 cut(s)	640
XmaJI	CCTAGG	1 cut(s)	698
XmnI	GAANNNNTTC	6 cut(s)	107, 283, 769, 824, 1435, 1544
XspI	CTAG	8 cut(s)	419, 699, 707, 1206, 1368, 1382, 1670, 2009
ZraI	GACGTC	1 cut(s)	159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.