Rh5DG185700

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
N/A
Physical Location & Seq
Forward (+)
20649720 .. 20661151
11432 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG185700.1

Sequence Viewer

Length: 1728 bp
ATGCCAGGCAATCTGAAATTCTTAAATTTGGGCAGGACTGCAATAGAAGAATTGCCGTCATCAATTTGGTCTCTCGAGAAGCTTTATGCATTGGGTCTTGGATCATGTGAAGAGCTTAAGAATCTTCAAAGCAGCGCTTGTAGGCTGAATTCGCTCCAATCTCTTGATCTAAATGGTTGCCTCTCTCTTGAGTCTTTGTCTGTCGAGCTACCTTCTAGGTTGAGGAAACTGGACTTGAGAAATTGCAAGAGTCTTCGTTCTTTACCTGTCAAGCTACCTTCTAGGCTGAGAAAACTGGACTTGAGAAATTGCAAAAGTCTTCAGTCTTTACCTTTTGAGCTACCTTCTGGGCCAGAAGACCTAAACTTGAGCAATTGCAAGAGTCTTAGATCTTTGCCTGTCGAGCTACCTTCTAGGCTGAATAGACTGAGCTTGAGAAATTGCAAGAGTCTTAGATCTTTGCCTGTCGAGCTACCTTCTGGGCTGAATAGACTGACCTTGAGAAATTGCAAGAGTCTTGGGTCTTTGCCTGTCGAGCTCCCTTCTAGGCTGAAGAAACTGAGCTTGAGAAATTGTAAGAGTCTTGGGTCTTTGCCTATCGAGCTACCTTCTGGGCTGAATAGACTGAGCTTGAGAAATTGCAAGAGTCTTAGGTCTTTGCCTGTTGAGCTCCCTTTTGGGCTGAAGAAACTGAGCTTGAGAAATTGCAAGAGCCTTGGGTCTTTGCCTGTCGCGCTACCTTCTAGGCTGAAACGACTGAGCTTGAAAAACTGCAAGAGTCTTGGGTCATTGCCTGTCGAGCTCCCTTCTGGGCTGAACCAACTGAGCTTGAGAAACTGCAAGAGTCTTGGGTCTTTGCCTGTCGAGCTCCCTTCTGGGCTGAAGATACTGAGCTTGAGAAATTGCAAGAGTCTTGGGTCTTTGCCTGTTGCGCTACCTTCTAGGCTGAAAAGACTGAGCTTGAGCTATTGCAAGAGTCTTGGGTCTTTGCCTGTCGAGCTACCTTCTGAGCTGAACAGACTGAGCTTGAGAAATTGCAAGTGTCTTGGGTCTTTGCCTGTCGAGCTACCTTCTGGGTTGAAGAGACTGAGCTTGAGAAACTGCAAGAGTCTTGGGTCTTTCAGTGTACTACCTGATGGGCTGGTTTACCTGGACTTGAGCAAGTACAAGAGTCTTGAGTCTTTGCCTGTCGAGCTGCCCTCTGGGCTAGTGTACCTGCACTTGAGAAATTGTAAGAGTCTTGGGTCTTTGCCTGTCGAGCTCCCTTCTGGGCTGAGGAAACTGGACTTGAGAAATTGCAAGAGTCTTGGGTCTTTACCGAAGCTGCCATGCCTTCTAAAAGAGTTGGATGCACATGGCTGCACGTCACTAGAGACAGTCTCAAGTTCGATGAGAACTGCACCCATACAAGGAGGAAAACTGAGCCGCAACCACAAGGAAAATCTGGAATTACCATTGTTTGACTTGACTACTATTGTTAATGCAACCTGTAACTTCTCAAACGACACTAAACTAGGAGGTCTTTTATGTGTGCAACAAAAACTACAAGATAGGCCAAGTATGCCAGCTACTGTTCTAGCATTGAGCGGTGAAGGTGCATTGCCTCAACCTCAGAAGCCTGATTTTTATAGTGGAAGGAATCTGACAGATCTTGAAGATTCTACAGATGAGGCTACAGAATGTTCAGCTAATGAACTCACTGTTACACTATTGGGGGCTCCATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

575

Amino Acids

62.6

Weight (kDa)

9.56

Isoelectric Point (pI)

64.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 5 - 188 1e-05 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1224
AccBSI CCGCTC 1 cut(s) 1587
AccII CGCG 1 cut(s) 734
AciI CCGC 2 cut(s) 1426, 1587
AclWI GGATC 1 cut(s) 109
AcsI RAATTY 3 cut(s) 17, 25, 148
AcuI CTGAAG 4 cut(s) 305, 572, 704, 902
AfaI GTAC 3 cut(s) 1128, 1166, 1214
AfeI AGCGCT 1 cut(s) 136
AfiI CCNNNNNNNGG 1 cut(s) 1409
AflII CTTAAG 1 cut(s) 116
AgsI TTSAA 4 cut(s) 128, 766, 1081, 1655
AjiI CACGTC 1 cut(s) 1365
AjnI CCWGG 2 cut(s) 4, 1149
Alw21I GWGCWC 5 cut(s) 540, 672, 804, 870, 1263
Alw26I GTCTC 4 cut(s) 75, 1078, 1367, 1384
AlwI GGATC 1 cut(s) 109
AlwNI CAGNNNCTG 1 cut(s) 1571
Ama87I CYCGRG 1 cut(s) 74
Aor51HI AGCGCT 1 cut(s) 136
AoxI GGCC 2 cut(s) 350, 1553
ApeKI GCWGC 4 cut(s) 132, 1195, 1324, 1359
ApoI RAATTY 3 cut(s) 17, 25, 148
AspLEI GCGC 3 cut(s) 137, 736, 934
AspS9I GGNCC 1 cut(s) 350
AsuHPI GGTGA 1 cut(s) 1601
AvaI CYCGRG 1 cut(s) 74
BanII GRGCYC 6 cut(s) 540, 672, 804, 870, 1263, 1720
BbsI GAAGAC 3 cut(s) 245, 311, 363
Bbv12I GWGCWC 5 cut(s) 540, 672, 804, 870, 1263
BbvCI CCTCAGC 1 cut(s) 1274
BbvI GCAGC 4 cut(s) 144, 1182, 1311, 1346
BccI CCATC 1 cut(s) 1130
BceAI ACGGC 1 cut(s) 40
BciT130I CCWGG 2 cut(s) 6, 1151
BcoDI GTCTC 4 cut(s) 75, 1078, 1367, 1384
BfmI CTRYAG 2 cut(s) 1662, 1674
BfoI RGCGCY 1 cut(s) 138
BfrI CTTAAG 1 cut(s) 116
BfuAI ACCTGC 1 cut(s) 1224
BglI GCCNNNNNGGC 1 cut(s) 1204
BglII AGATCT 3 cut(s) 389, 455, 1648
BisI GCNGC 5 cut(s) 133, 1196, 1325, 1360, 1426
BlsI GCNGC 5 cut(s) 134, 1197, 1326, 1361, 1427
Bme1390I CCNGG 2 cut(s) 6, 1151
BmeT110I CYCGRG 1 cut(s) 74
BmgBI CACGTC 1 cut(s) 1365
BmgT120I GGNCC 1 cut(s) 350
BmiI GGNNCC 1 cut(s) 1719
BmrFI CCNGG 2 cut(s) 6, 1151
BmsI GCATC 1 cut(s) 1339
BpiI GAAGAC 3 cut(s) 245, 311, 363
BplI GAGNNNNNCTC 4 cut(s) 1184, 1216, 1364, 1396
Bpu10I CCTNAGC 1 cut(s) 1274
BsaI GGTCTC 1 cut(s) 75
BsaJI CCNNGG 1 cut(s) 715
Bsc4I CCNNNNNNNGG 1 cut(s) 1409
Bse1I ACTGG 3 cut(s) 234, 300, 1287
Bse3DI GCAATG 2 cut(s) 788, 1598
BseBI CCWGG 2 cut(s) 6, 1151
BseDI CCNNGG 1 cut(s) 715
BseGI GGATG 1 cut(s) 1354
BseLI CCNNNNNNNGG 1 cut(s) 1409
BseMI GCAATG 2 cut(s) 788, 1598
BseNI ACTGG 3 cut(s) 234, 300, 1287
BseXI GCAGC 4 cut(s) 144, 1182, 1311, 1346
BsgI GTGCAG 3 cut(s) 1202, 1345, 1383
Bsh1236I CGCG 1 cut(s) 734
BshFI GGCC 2 cut(s) 352, 1555
BsiHKAI GWGCWC 5 cut(s) 540, 672, 804, 870, 1263
BsiHKCI CYCGRG 1 cut(s) 74
BslI CCNNNNNNNGG 1 cut(s) 1409
BsmAI GTCTC 4 cut(s) 75, 1078, 1367, 1384
BsnI GGCC 2 cut(s) 352, 1555
Bso31I GGTCTC 1 cut(s) 75
BsoBI CYCGRG 1 cut(s) 74
Bsp1286I GDGCHC 6 cut(s) 540, 672, 804, 870, 1263, 1720
Bsp143I GATC 5 cut(s) 101, 166, 389, 455, 1648
BspACI CCGC 2 cut(s) 1426, 1587
BspANI GGCC 2 cut(s) 352, 1555
BspFNI CGCG 1 cut(s) 734
BspLI GGNNCC 1 cut(s) 1719
BspMI ACCTGC 1 cut(s) 1224
BspPI GGATC 1 cut(s) 109
BspQI GCTCTTC 1 cut(s) 105
BspTI CTTAAG 1 cut(s) 116
BspTNI GGTCTC 1 cut(s) 75
BsrBI CCGCTC 1 cut(s) 1587
BsrDI GCAATG 2 cut(s) 788, 1598
BsrI ACTGG 3 cut(s) 234, 300, 1287
BssECI CCNNGG 1 cut(s) 715
BssMI GATC 5 cut(s) 101, 166, 389, 455, 1648
BssT1I CCWWGG 1 cut(s) 715
Bst2UI CCWGG 2 cut(s) 6, 1151
Bst4CI ACNGT 3 cut(s) 1378, 1573, 1702
Bst6I CTCTTC 2 cut(s) 105, 1076
BstAFI CTTAAG 1 cut(s) 116
BstC8I GCNNGC 1 cut(s) 1566
BstF5I GGATG 1 cut(s) 1354
BstFNI CGCG 1 cut(s) 734
BstH2I RGCGCY 1 cut(s) 138
BstHHI GCGC 3 cut(s) 137, 736, 934
BstKTI GATC 5 cut(s) 104, 169, 392, 458, 1651
BstMAI GTCTC 4 cut(s) 75, 1078, 1367, 1384
BstMBI GATC 5 cut(s) 101, 166, 389, 455, 1648
BstNI CCWGG 2 cut(s) 6, 1151
BstSCI CCNGG 2 cut(s) 4, 1149
BstSFI CTRYAG 2 cut(s) 1662, 1674
BstUI CGCG 1 cut(s) 734
BstV1I GCAGC 4 cut(s) 144, 1182, 1311, 1346
BstV2I GAAGAC 3 cut(s) 245, 311, 363
BstX2I RGATCY 3 cut(s) 389, 455, 1648
BstYI RGATCY 3 cut(s) 389, 455, 1648
BsuRI GGCC 2 cut(s) 352, 1555
BtrI CACGTC 1 cut(s) 1365
BtsCI GGATG 1 cut(s) 1354
BtsIMutI CAGTG 2 cut(s) 1129, 1698
BveI ACCTGC 1 cut(s) 1224
Cac8I GCNNGC 1 cut(s) 1566
CaiI CAGNNNCTG 1 cut(s) 1571
CfoI GCGC 3 cut(s) 137, 736, 934
Cfr13I GGNCC 1 cut(s) 350
Csp6I GTAC 3 cut(s) 1127, 1165, 1213
CviAII CATG 4 cut(s) 105, 1329, 1355, 1722
CviQI GTAC 3 cut(s) 1127, 1165, 1213
DpnI GATC 5 cut(s) 103, 168, 391, 457, 1650
DpnII GATC 5 cut(s) 101, 166, 389, 455, 1648
Eam1104I CTCTTC 2 cut(s) 105, 1076
EarI CTCTTC 2 cut(s) 105, 1076
Ecl136II GAGCTC 5 cut(s) 538, 670, 802, 868, 1261
Eco130I CCWWGG 1 cut(s) 715
Eco24I GRGCYC 6 cut(s) 540, 672, 804, 870, 1263, 1720
Eco31I GGTCTC 1 cut(s) 75
Eco47III AGCGCT 1 cut(s) 136
Eco53kI GAGCTC 5 cut(s) 538, 670, 802, 868, 1261
Eco57I CTGAAG 4 cut(s) 305, 572, 704, 902
Eco88I CYCGRG 1 cut(s) 74
EcoICRI GAGCTC 5 cut(s) 538, 670, 802, 868, 1261
EcoRI GAATTC 1 cut(s) 148
EcoRII CCWGG 2 cut(s) 4, 1149
EcoT14I CCWWGG 1 cut(s) 715
EcoT22I ATGCAT 1 cut(s) 91
EcoT38I GRGCYC 6 cut(s) 540, 672, 804, 870, 1263, 1720
ErhI CCWWGG 1 cut(s) 715
FaeI CATG 4 cut(s) 108, 1332, 1358, 1725
FaiI YATR 9 cut(s) 87, 106, 1330, 1356, 1406, 1528, 1562, 1629, 1723
FalI AAGNNNNNCTT 2 cut(s) 121, 153
FatI CATG 4 cut(s) 104, 1328, 1354, 1721
Fnu4HI GCNGC 5 cut(s) 133, 1196, 1325, 1360, 1426
FokI GGATG 1 cut(s) 1361
FriOI GRGCYC 6 cut(s) 540, 672, 804, 870, 1263, 1720
Fsp4HI GCNGC 5 cut(s) 133, 1196, 1325, 1360, 1426
GlaI GCGC 3 cut(s) 136, 735, 933
GluI GCNGC 5 cut(s) 133, 1196, 1325, 1360, 1426
HaeII RGCGCY 1 cut(s) 138
HaeIII GGCC 2 cut(s) 352, 1555
HhaI GCGC 3 cut(s) 137, 736, 934
Hin1II CATG 4 cut(s) 108, 1332, 1358, 1725
Hin6I GCGC 3 cut(s) 135, 734, 932
HinP1I GCGC 3 cut(s) 135, 734, 932
HindIII AAGCTT 1 cut(s) 80
HphI GGTGA 1 cut(s) 1601
Hpy166II GTNNAC 3 cut(s) 1127, 1147, 1213
Hpy188I TCNGA 4 cut(s) 15, 1009, 1614, 1644
Hpy188III TCNNGA 7 cut(s) 74, 76, 164, 188, 1175, 1445, 1652
Hpy8I GTNNAC 3 cut(s) 1127, 1147, 1213
HpyCH4III ACNGT 3 cut(s) 1378, 1573, 1702
HpyCH4IV ACGT 1 cut(s) 1364
HpySE526I ACGT 1 cut(s) 1364
Hsp92II CATG 4 cut(s) 108, 1332, 1358, 1725
HspAI GCGC 3 cut(s) 135, 734, 932
Kzo9I GATC 5 cut(s) 101, 166, 389, 455, 1648
LguI GCTCTTC 1 cut(s) 105
LmnI GCTCC 7 cut(s) 159, 543, 675, 807, 873, 1266, 1723
Lsp1109I GCAGC 4 cut(s) 144, 1182, 1311, 1346
LweI GCATC 1 cut(s) 1339
MaeII ACGT 1 cut(s) 1364
MaeIII GTNAC 3 cut(s) 1365, 1490, 1702
MalI GATC 5 cut(s) 103, 168, 391, 457, 1650
MbiI CCGCTC 1 cut(s) 1587
MboI GATC 5 cut(s) 101, 166, 389, 455, 1648
MfeI CAATTG 1 cut(s) 373
MflI RGATCY 3 cut(s) 389, 455, 1648
MhlI GDGCHC 6 cut(s) 540, 672, 804, 870, 1263, 1720
MmeI TCCRAC 1 cut(s) 1326
MnlI CCTC 9 cut(s) 191, 216, 1210, 1269, 1406, 1511, 1614, 1620, 1663
Mph1103I ATGCAT 1 cut(s) 91
MseI TTAA 3 cut(s) 23, 117, 1479
MspCI CTTAAG 1 cut(s) 116
MspR9I CCNGG 2 cut(s) 6, 1151
MunI CAATTG 1 cut(s) 373
MvaI CCWGG 2 cut(s) 6, 1151
MvnI CGCG 1 cut(s) 734
NdeII GATC 5 cut(s) 101, 166, 389, 455, 1648
NlaIII CATG 4 cut(s) 108, 1332, 1358, 1725
NlaIV GGNNCC 1 cut(s) 1719
NmuCI GTSAC 1 cut(s) 1365
NsiI ATGCAT 1 cut(s) 91
PaeR7I CTCGAG 1 cut(s) 74
PciSI GCTCTTC 1 cut(s) 105
PfeI GAWTC 3 cut(s) 121, 1639, 1658
PkrI GCNGC 5 cut(s) 134, 1197, 1326, 1361, 1427
Psp124BI GAGCTC 5 cut(s) 540, 672, 804, 870, 1263
Psp6I CCWGG 2 cut(s) 4, 1149
PspGI CCWGG 2 cut(s) 4, 1149
PspN4I GGNNCC 1 cut(s) 1719
PspPI GGNCC 1 cut(s) 350
PstNI CAGNNNCTG 1 cut(s) 1571
PsuI RGATCY 3 cut(s) 389, 455, 1648
RsaI GTAC 3 cut(s) 1128, 1166, 1214
RsaNI GTAC 3 cut(s) 1127, 1165, 1213
SacI GAGCTC 5 cut(s) 540, 672, 804, 870, 1263
SapI GCTCTTC 1 cut(s) 105
SaqAI TTAA 3 cut(s) 23, 117, 1479
SatI GCNGC 5 cut(s) 133, 1196, 1325, 1360, 1426
Sau3AI GATC 5 cut(s) 101, 166, 389, 455, 1648
Sau96I GGNCC 1 cut(s) 350
ScrFI CCNGG 2 cut(s) 6, 1151
SduI GDGCHC 6 cut(s) 540, 672, 804, 870, 1263, 1720
SfaNI GCATC 1 cut(s) 1339
SfcI CTRYAG 2 cut(s) 1662, 1674
Sfr274I CTCGAG 1 cut(s) 74
SlaI CTCGAG 1 cut(s) 74
SsiI CCGC 2 cut(s) 1426, 1587
SstI GAGCTC 5 cut(s) 540, 672, 804, 870, 1263
StyD4I CCNGG 2 cut(s) 4, 1149
StyI CCWWGG 1 cut(s) 715
TaaI ACNGT 3 cut(s) 1378, 1573, 1702
TaiI ACGT 1 cut(s) 1367
TatI WGTACW 2 cut(s) 1126, 1164
TauI GCSGC 1 cut(s) 1428
TfiI GAWTC 3 cut(s) 121, 1639, 1658
Tru1I TTAA 3 cut(s) 23, 117, 1479
Tru9I TTAA 3 cut(s) 23, 117, 1479
TscAI CASTG 2 cut(s) 1129, 1705
TseFI GTSAC 1 cut(s) 1365
TseI GCWGC 4 cut(s) 132, 1195, 1324, 1359
Tsp45I GTSAC 1 cut(s) 1365
TspDTI ATGAA 1 cut(s) 1707
TspRI CASTG 2 cut(s) 1129, 1705
Vha464I CTTAAG 1 cut(s) 116
XapI RAATTY 3 cut(s) 17, 25, 148
XhoI CTCGAG 1 cut(s) 74
Zsp2I ATGCAT 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.