Rh6AG137600

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
N/A
Physical Location & Seq
Forward (+)
21059046 .. 21062015
2970 bp
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UTR
Exon/CDS
Intron
Rh6AG137600.1

Sequence Viewer

Length: 273 bp
ATGGCTAATGCCAGCAGCGAACCGAACCAGTTCAGCCAGGTTTTGACGGCGAGCATAATGGTGGCAGTAAGTTCGCAACGCGAGAGGCAAACTTCACAGGTTGCCGGTTTTTTGCGGCGTGAAGTTAGGGGGCGAGTTATGTATCCGAGTTGTAATGTTAGGTTTGAAATTTTTCCCTTTTATAACTTGACATCAACACGGGCGCCAGCGCAAGGTGCTCGACCTCTTTCTCCGCCAAGCTCAGTGAGGAAAGGTAAAGTTCCGCTAGTGTGA

Protein Analysis

90

Amino Acids

9.94

Weight (kDa)

11.44

Isoelectric Point (pI)

68.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 183
AccB1I GGYRCC 1 cut(s) 202
AccII CGCG 1 cut(s) 81
AciI CCGC 3 cut(s) 115, 233, 263
AcsI RAATTY 1 cut(s) 168
AcyI GRCGYC 1 cut(s) 203
AfiI CCNNNNNNNGG 1 cut(s) 212
AgsI TTSAA 1 cut(s) 167
AjnI CCWGG 1 cut(s) 36
AluBI AGCT 1 cut(s) 240
AluI AGCT 1 cut(s) 240
Alw21I GWGCWC 1 cut(s) 220
ApeKI GCWGC 1 cut(s) 15
ApoI RAATTY 1 cut(s) 168
Asp700I GAANNNNTTC 2 cut(s) 29, 171
AspLEI GCGC 2 cut(s) 205, 211
BanI GGYRCC 1 cut(s) 202
Bbv12I GWGCWC 1 cut(s) 220
BbvI GCAGC 1 cut(s) 27
BceAI ACGGC 1 cut(s) 63
BcgI CGANNNNNNTGC 4 cut(s) 54, 88, 200, 234
BciT130I CCWGG 1 cut(s) 38
BciVI GTATCC 1 cut(s) 153
BfaI CTAG 1 cut(s) 266
BfoI RGCGCY 1 cut(s) 206
BfuI GTATCC 1 cut(s) 153
BisI GCNGC 2 cut(s) 16, 116
BlsI GCNGC 2 cut(s) 17, 117
Bme1390I CCNGG 1 cut(s) 38
BmiI GGNNCC 1 cut(s) 204
BmrFI CCNGG 1 cut(s) 38
BsaHI GRCGYC 1 cut(s) 203
Bsc4I CCNNNNNNNGG 1 cut(s) 212
Bse118I RCCGGY 1 cut(s) 104
Bse1I ACTGG 1 cut(s) 28
BseBI CCWGG 1 cut(s) 38
BseLI CCNNNNNNNGG 1 cut(s) 212
BseMII CTCAG 1 cut(s) 255
BseNI ACTGG 1 cut(s) 28
BseXI GCAGC 1 cut(s) 27
Bsh1236I CGCG 1 cut(s) 81
BshNI GGYRCC 1 cut(s) 202
BsiHKAI GWGCWC 1 cut(s) 220
BsiSI CCGG 1 cut(s) 105
BslI CCNNNNNNNGG 1 cut(s) 212
Bsp1286I GDGCHC 1 cut(s) 220
BspACI CCGC 3 cut(s) 115, 233, 263
BspCNI CTCAG 1 cut(s) 254
BspFNI CGCG 1 cut(s) 81
BspLI GGNNCC 1 cut(s) 204
BspT107I GGYRCC 1 cut(s) 202
BsrFI RCCGGY 1 cut(s) 104
BsrI ACTGG 1 cut(s) 28
BssAI RCCGGY 1 cut(s) 104
BssNI GRCGYC 1 cut(s) 203
Bst2UI CCWGG 1 cut(s) 38
BstACI GRCGYC 1 cut(s) 203
BstC8I GCNNGC 3 cut(s) 13, 52, 207
BstDEI CTNAG 1 cut(s) 241
BstFNI CGCG 1 cut(s) 81
BstH2I RGCGCY 1 cut(s) 206
BstHHI GCGC 2 cut(s) 205, 211
BstMWI GCNNNNNNNGC 1 cut(s) 215
BstNI CCWGG 1 cut(s) 38
BstSCI CCNGG 1 cut(s) 36
BstUI CGCG 1 cut(s) 81
BstV1I GCAGC 1 cut(s) 27
BsuI GTATCC 1 cut(s) 153
BtsIMutI CAGTG 1 cut(s) 249
Cac8I GCNNGC 3 cut(s) 13, 52, 207
CfoI GCGC 2 cut(s) 205, 211
Cfr10I RCCGGY 1 cut(s) 104
CviJI RGCY 3 cut(s) 5, 36, 240
CviKI_1 RGCY 3 cut(s) 5, 36, 240
DdeI CTNAG 1 cut(s) 241
DinI GGCGCC 1 cut(s) 204
EciI GGCGGA 1 cut(s) 222
EcoRII CCWGG 1 cut(s) 36
EgeI GGCGCC 1 cut(s) 204
EheI GGCGCC 1 cut(s) 204
FaiI YATR 3 cut(s) 56, 140, 183
Fnu4HI GCNGC 2 cut(s) 16, 116
Fsp4HI GCNGC 2 cut(s) 16, 116
FspBI CTAG 1 cut(s) 266
GlaI GCGC 2 cut(s) 204, 210
GluI GCNGC 2 cut(s) 16, 116
HaeII RGCGCY 1 cut(s) 206
HapII CCGG 1 cut(s) 105
HhaI GCGC 2 cut(s) 205, 211
Hin1I GRCGYC 1 cut(s) 203
Hin6I GCGC 2 cut(s) 203, 209
HinP1I GCGC 2 cut(s) 203, 209
HpaII CCGG 1 cut(s) 105
Hpy188I TCNGA 1 cut(s) 147
HpyF10VI GCNNNNNNNGC 1 cut(s) 215
HpyF3I CTNAG 1 cut(s) 241
Hsp92I GRCGYC 1 cut(s) 203
HspAI GCGC 2 cut(s) 203, 209
KasI GGCGCC 1 cut(s) 202
LpnPI CCDG 7 cut(s) 23, 25, 41, 50, 83, 118, 219
Lsp1109I GCAGC 1 cut(s) 27
MaeI CTAG 1 cut(s) 266
MhlI GDGCHC 1 cut(s) 220
MluCI AATT 1 cut(s) 168
Mly113I GGCGCC 1 cut(s) 203
MnlI CCTC 3 cut(s) 78, 234, 240
MroXI GAANNNNTTC 2 cut(s) 29, 171
MslI CAYNNNNRTG 1 cut(s) 59
MspI CCGG 1 cut(s) 105
MspR9I CCNGG 1 cut(s) 38
MvaI CCWGG 1 cut(s) 38
MvnI CGCG 1 cut(s) 81
MwoI GCNNNNNNNGC 1 cut(s) 215
NarI GGCGCC 1 cut(s) 203
NlaIV GGNNCC 1 cut(s) 204
PdmI GAANNNNTTC 2 cut(s) 29, 171
PkrI GCNGC 2 cut(s) 17, 117
PluTI GGCGCC 1 cut(s) 206
PsiI TTATAA 1 cut(s) 183
Psp6I CCWGG 1 cut(s) 36
PspGI CCWGG 1 cut(s) 36
PspN4I GGNNCC 1 cut(s) 204
RseI CAYNNNNRTG 1 cut(s) 59
SatI GCNGC 2 cut(s) 16, 116
ScrFI CCNGG 1 cut(s) 38
SduI GDGCHC 1 cut(s) 220
SetI ASST 7 cut(s) 42, 102, 164, 217, 226, 242, 256
SfoI GGCGCC 1 cut(s) 204
SmiMI CAYNNNNRTG 1 cut(s) 59
Sse9I AATT 1 cut(s) 168
SsiI CCGC 3 cut(s) 115, 233, 263
SspDI GGCGCC 1 cut(s) 202
SspMI CTAG 1 cut(s) 266
StyD4I CCNGG 1 cut(s) 36
TaqI TCGA 1 cut(s) 220
TasI AATT 1 cut(s) 168
TauI GCSGC 1 cut(s) 118
TscAI CASTG 1 cut(s) 249
TseI GCWGC 1 cut(s) 15
TspRI CASTG 1 cut(s) 249
XapI RAATTY 1 cut(s) 168
XmnI GAANNNNTTC 2 cut(s) 29, 171
XspI CTAG 1 cut(s) 266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.