Rh6AG471300

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
N/A
Physical Location & Seq
Reverse (-)
65406910 .. 65408336
1427 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG471300.1

Sequence Viewer

Length: 501 bp
ATGCCAAAAGAACAATTACAACAATGGAAACGTAATCGGCGTGCCTTGGCTTATTCAACTGTTGGAACTCTTGACTACATGGCACCCGAGGTTTTGCTGAAGAAAGGATATGTTATGGAGTGTGATTGGTGGTCACTAGGAGCAATCATGTACGAGATGCTAGTAGGCTATCCTCCATTCTGCTCTGATGATCCAAGGATCACATGCCGCAAGATTATCAATTGGAGAACATGCCTGAAGTTTCCCGATGAGCCAAAAATTTCAGACGAGGCAAGGGATTTGATCTGTCACTTGTTATGTGATGTTGAAACAAGGCTTGGGACACATGGAGTAGAAGAAATTAAGGTAACCACAGGTATTGAGTGGGACAGGCTATATGAAATTGAAGCTGCGTATAAACCTACAGTTGTTGGAGACTTGGACACTCAGAATTTCGAGAAGTTTCCTCATAAGGTGCACCATCTGCAACACCGACAGTGGGACCTTGGCGGAAGATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000902 GO:0000904 GO:0002009 GO:0002165 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0007423 GO:0007444 GO:0007455 GO:0007469 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0008037 GO:0008038 GO:0008144 GO:0008150 GO:0008152 GO:0008544 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009913 GO:0009987 GO:0010769 GO:0010975 GO:0016043 GO:0016301 GO:0016310 GO:0016358 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022008 GO:0022416 GO:0022603 GO:0022604 GO:0023052 GO:0030030 GO:0030154 GO:0030182 GO:0030424 GO:0030425 GO:0030554 GO:0030855 GO:0031175 GO:0031344 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032990 GO:0035107 GO:0035114 GO:0035120 GO:0035214 GO:0035220 GO:0035239 GO:0035295 GO:0035315 GO:0035316 GO:0035317 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0036477 GO:0042995 GO:0043005 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044297 GO:0044424 GO:0044444 GO:0044463 GO:0044464 GO:0045595 GO:0045664 GO:0048468 GO:0048513 GO:0048563 GO:0048569 GO:0048666 GO:0048667 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048800 GO:0048812 GO:0048813 GO:0048814 GO:0048856 GO:0048858 GO:0048869 GO:0050767 GO:0050773 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051716 GO:0051960 GO:0060284 GO:0060429 GO:0060562 GO:0065007 GO:0070451 GO:0070593 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0097447 GO:0097458 GO:0099568 GO:0120025 GO:0120035 GO:0120036 GO:0120038 GO:0120039 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

166

Amino Acids

19.49

Weight (kDa)

6.07

Isoelectric Point (pI)

42.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 14 - 108 2.9e-19 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 82
AciI CCGC 2 cut(s) 208, 489
AclWI GGATC 2 cut(s) 185, 206
AcsI RAATTY 2 cut(s) 258, 430
AcuI CTGAAG 2 cut(s) 119, 257
AfaI GTAC 1 cut(s) 152
AfiI CCNNNNNNNGG 1 cut(s) 478
AgsI TTSAA 3 cut(s) 57, 308, 386
AjuI GAANNNNNNNTTGG 2 cut(s) 300, 332
AluBI AGCT 1 cut(s) 389
AluI AGCT 1 cut(s) 389
Alw21I GWGCWC 1 cut(s) 459
Alw26I GTCTC 1 cut(s) 408
Alw44I GTGCAC 1 cut(s) 455
AlwI GGATC 2 cut(s) 185, 206
Ama87I CYCGRG 1 cut(s) 86
ApaLI GTGCAC 1 cut(s) 455
ApeKI GCWGC 1 cut(s) 389
ApoI RAATTY 2 cut(s) 258, 430
AspS9I GGNCC 1 cut(s) 481
AvaI CYCGRG 1 cut(s) 86
AvaII GGWCC 1 cut(s) 481
BaeGI GKGCMC 1 cut(s) 459
BanI GGYRCC 1 cut(s) 82
Bbv12I GWGCWC 1 cut(s) 459
BbvI GCAGC 1 cut(s) 376
BccI CCATC 1 cut(s) 468
BcoDI GTCTC 1 cut(s) 408
BfaI CTAG 2 cut(s) 137, 161
BfmI CTRYAG 1 cut(s) 402
BisI GCNGC 2 cut(s) 208, 390
BlsI GCNGC 2 cut(s) 209, 391
Bme18I GGWCC 1 cut(s) 481
BmeT110I CYCGRG 1 cut(s) 86
BmgT120I GGNCC 1 cut(s) 481
BmiI GGNNCC 2 cut(s) 84, 482
BmsI GCATC 1 cut(s) 147
BsaJI CCNNGG 4 cut(s) 45, 87, 194, 484
Bsc4I CCNNNNNNNGG 1 cut(s) 478
BseDI CCNNGG 4 cut(s) 45, 87, 194, 484
BseLI CCNNNNNNNGG 1 cut(s) 478
BseMII CTCAG 1 cut(s) 440
BseSI GKGCMC 1 cut(s) 459
BseXI GCAGC 1 cut(s) 376
BshNI GGYRCC 1 cut(s) 82
BsiHKAI GWGCWC 1 cut(s) 459
BsiHKCI CYCGRG 1 cut(s) 86
BslFI GGGAC 3 cut(s) 334, 380, 494
BslI CCNNNNNNNGG 1 cut(s) 478
BsmAI GTCTC 1 cut(s) 408
BsmFI GGGAC 3 cut(s) 334, 380, 494
BsoBI CYCGRG 1 cut(s) 86
Bsp1286I GDGCHC 1 cut(s) 459
Bsp143I GATC 3 cut(s) 190, 198, 282
BspACI CCGC 2 cut(s) 208, 489
BspCNI CTCAG 1 cut(s) 439
BspLI GGNNCC 2 cut(s) 84, 482
BspPI GGATC 2 cut(s) 185, 206
BspT107I GGYRCC 1 cut(s) 82
BssECI CCNNGG 4 cut(s) 45, 87, 194, 484
BssMI GATC 3 cut(s) 190, 198, 282
BssT1I CCWWGG 3 cut(s) 45, 194, 484
Bst4CI ACNGT 3 cut(s) 61, 406, 477
BstAPI GCANNNNNTGC 1 cut(s) 463
BstC8I GCNNGC 1 cut(s) 42
BstDEI CTNAG 1 cut(s) 426
BstEII GGTNACC 1 cut(s) 346
BstKTI GATC 3 cut(s) 193, 201, 285
BstMAI GTCTC 1 cut(s) 408
BstMBI GATC 3 cut(s) 190, 198, 282
BstMWI GCNNNNNNNGC 1 cut(s) 463
BstNSI RCATGY 2 cut(s) 207, 234
BstPI GGTNACC 1 cut(s) 346
BstSFI CTRYAG 1 cut(s) 402
BstSLI GKGCMC 1 cut(s) 459
BstV1I GCAGC 1 cut(s) 376
BtsIMutI CAGTG 1 cut(s) 482
Cac8I GCNNGC 1 cut(s) 42
Cfr13I GGNCC 1 cut(s) 481
Csp6I GTAC 1 cut(s) 151
CspCI CAANNNNNGTGG 2 cut(s) 340, 375
CviAII CATG 5 cut(s) 79, 148, 204, 231, 326
CviJI RGCY 6 cut(s) 50, 168, 253, 316, 373, 389
CviKI_1 RGCY 6 cut(s) 50, 168, 253, 316, 373, 389
CviQI GTAC 1 cut(s) 151
DdeI CTNAG 1 cut(s) 426
DpnI GATC 3 cut(s) 192, 200, 284
DpnII GATC 3 cut(s) 190, 198, 282
Eco130I CCWWGG 3 cut(s) 45, 194, 484
Eco47I GGWCC 1 cut(s) 481
Eco57I CTGAAG 2 cut(s) 119, 257
Eco88I CYCGRG 1 cut(s) 86
Eco91I GGTNACC 1 cut(s) 346
EcoO109I RGGNCCY 1 cut(s) 481
EcoO65I GGTNACC 1 cut(s) 346
EcoT14I CCWWGG 3 cut(s) 45, 194, 484
ErhI CCWWGG 3 cut(s) 45, 194, 484
FaeI CATG 5 cut(s) 82, 151, 207, 234, 329
FaqI GGGAC 3 cut(s) 334, 380, 494
FatI CATG 5 cut(s) 78, 147, 203, 230, 325
Fnu4HI GCNGC 2 cut(s) 208, 390
Fsp4HI GCNGC 2 cut(s) 208, 390
FspBI CTAG 2 cut(s) 137, 161
GluI GCNGC 2 cut(s) 208, 390
Hin1II CATG 5 cut(s) 82, 151, 207, 234, 329
Hpy166II GTNNAC 1 cut(s) 457
Hpy188I TCNGA 3 cut(s) 187, 265, 429
Hpy188III TCNNGA 3 cut(s) 71, 245, 436
Hpy8I GTNNAC 1 cut(s) 457
HpyCH4III ACNGT 3 cut(s) 61, 406, 477
HpyCH4IV ACGT 1 cut(s) 31
HpyCH4V TGCA 2 cut(s) 457, 466
HpyF10VI GCNNNNNNNGC 1 cut(s) 463
HpyF3I CTNAG 1 cut(s) 426
HpySE526I ACGT 1 cut(s) 31
Hsp92II CATG 5 cut(s) 82, 151, 207, 234, 329
Kzo9I GATC 3 cut(s) 190, 198, 282
LmnI GCTCC 1 cut(s) 140
LpnPI CCDG 3 cut(s) 248, 339, 355
Lsp1109I GCAGC 1 cut(s) 376
LweI GCATC 1 cut(s) 147
MaeI CTAG 2 cut(s) 137, 161
MaeII ACGT 1 cut(s) 31
MaeIII GTNAC 3 cut(s) 132, 287, 346
MalI GATC 3 cut(s) 192, 200, 284
MboI GATC 3 cut(s) 190, 198, 282
MboII GAAGA 2 cut(s) 112, 347
MfeI CAATTG 1 cut(s) 220
MhlI GDGCHC 1 cut(s) 459
MluCI AATT 6 cut(s) 14, 220, 258, 339, 381, 430
MmeI TCCRAC 2 cut(s) 43, 391
MnlI CCTC 4 cut(s) 82, 183, 262, 456
MseI TTAA 2 cut(s) 342, 499
MunI CAATTG 1 cut(s) 220
MwoI GCNNNNNNNGC 1 cut(s) 463
NdeII GATC 3 cut(s) 190, 198, 282
NlaIII CATG 5 cut(s) 82, 151, 207, 234, 329
NlaIV GGNNCC 2 cut(s) 84, 482
NmuCI GTSAC 2 cut(s) 132, 287
NspI RCATGY 2 cut(s) 207, 234
PcsI WCGNNNNNNNCGW 1 cut(s) 37
PkrI GCNGC 2 cut(s) 209, 391
PpuMI RGGWCCY 1 cut(s) 481
Psp5II RGGWCCY 1 cut(s) 481
PspEI GGTNACC 1 cut(s) 346
PspN4I GGNNCC 2 cut(s) 84, 482
PspPI GGNCC 1 cut(s) 481
PspPPI RGGWCCY 1 cut(s) 481
RsaI GTAC 1 cut(s) 152
RsaNI GTAC 1 cut(s) 151
SaqAI TTAA 2 cut(s) 342, 499
SatI GCNGC 2 cut(s) 208, 390
Sau3AI GATC 3 cut(s) 190, 198, 282
Sau96I GGNCC 1 cut(s) 481
SduI GDGCHC 1 cut(s) 459
SetI ASST 8 cut(s) 34, 93, 348, 358, 391, 403, 456, 486
SfaNI GCATC 1 cut(s) 147
SfcI CTRYAG 1 cut(s) 402
SinI GGWCC 1 cut(s) 481
Sse9I AATT 6 cut(s) 14, 220, 258, 339, 381, 430
SsiI CCGC 2 cut(s) 208, 489
SspMI CTAG 2 cut(s) 137, 161
StyI CCWWGG 3 cut(s) 45, 194, 484
TaaI ACNGT 3 cut(s) 61, 406, 477
TaiI ACGT 1 cut(s) 34
TaqI TCGA 1 cut(s) 435
TasI AATT 6 cut(s) 14, 220, 258, 339, 381, 430
TauI GCSGC 1 cut(s) 210
Tru1I TTAA 2 cut(s) 342, 499
Tru9I TTAA 2 cut(s) 342, 499
TscAI CASTG 1 cut(s) 482
TseFI GTSAC 2 cut(s) 132, 287
TseI GCWGC 1 cut(s) 389
Tsp45I GTSAC 2 cut(s) 132, 287
TspDTI ATGAA 1 cut(s) 393
TspRI CASTG 1 cut(s) 482
VneI GTGCAC 1 cut(s) 455
VpaK11BI GGWCC 1 cut(s) 481
XapI RAATTY 2 cut(s) 258, 430
XceI RCATGY 2 cut(s) 207, 234
XspI CTAG 2 cut(s) 137, 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.