Rh6BG004900
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
N/A
Physical Location & Seq
Reverse (-)
715823 .. 724424
8602 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG004900.1

Sequence Viewer

Length: 2055 bp
ATGGAGGCGATCGAAGAGTTGTTGCAACTGTCAGACTCCATGCGCCAAGGCCAGGCCGTCCTCGCCGACGAAGACGTTGACGAAAACTCTCCCGCCTCCTCCCGCCGCTCCTCAACTTTCCTCAACGTCGTCGCTCTCGGCAATGTTGGTGCCGGTAAATCAGCTGTTTTGAACAGCTTAATTGGACATCCTGTTTTGCCGACTGGTGAGAATGGTGCTACTCGAGCTCCAATCAGCATTGATTTACAGAGGGATGGTTCATTGAGCAGCAAATCGATAATACTGCAGATTGACAATAAGTCCCAGCAAGTTTCTGCAAGTGCTTTACGGCATTCTTTGCAAGATAGACTGAGTAAGAGTTCTTCAGGCAGAACCCGAGATGAAATTTACTTGAAACTACGGACAAGTACAGCCCCTCCCCTCAAATTGATTGATTTACCCGGGCTTGATCAACGGACTGTGGATGAGTCTATGCTAAGTGAATATGCAGAGCACAATGATGCAATTTTGCTGGTTATAATACCTGCATCACAAGCACCTGAAGTTGCTTCCTCTAAAGCCCTCAGAGCTGTCAAGGAATATGATGGAGATGGTACAAGAACTGTTGGAGTAATCAGTAAGATAGACCAAGCCGCGTCAGATCCGAAAGCACTTGCTGCAGTCCAGGCTCTGCTTTTAAATCAGGGGCCATCAAGAGCATCTGATATTCCCTGGGTTGCTCTAATAGGTCAATCAGTTTCGATAGCTTCCGCACAGTCTGGCTCTGAGAATTCTTTGGAAACTGCTTGGAGGGCTGAAAGTGAAAGTCTTAAATCCATTCTGACCGGTGCTCCTCAAAGTAAGCTAGGCAGAATTGCGCTAGTGGATGCTTTGGCCCAGCAAATTCGCAGTCGCATGAAAATCCGGCTTCCGAACCTCCTTTCTGGGTTACAAGGGAAGTCTCAAATAGTTCAGGATGAGTTGGTAAAGCTTGGTGCATCCATGGTACAGAGTGCTGAAGGTACTAGATCTCTTGCTCTGGAGCTTTGTCGTGAATTTGAGGATAAGTTTCTCCTACACATTACATCTGGTGAGGTACACCGTGTCCTGGTAGACATAGTGTCTGCTGCTGCAAATGCTACTCCAGGTCTTGGAAGATACCCTCCTTTCAAGAGGGAGGAATGTAATATTGAAGAGATTGAAGAGGAAGAACCTGCTCCTCCACCAAAGAGTTCAAAGGATAAGAAGGCGAATGGGCCAGAAAAAGCACCTAGTCTTGCATTTAAGTTTACTAGCAAGGTTCCGTACAAAACTGTTCTGAAAGCACATAGTGCCGTTGTGTTGAAAGCTGAGACTGTGGCAGACAAGGTTGAGTGGATAAATAAGATTTCAAAGGTTATCCAACCTTCTAAAGGAGCACCGAGGGGTGCACCATCTGATGGTGGTCCAACTATGCGACAGAGTCTTTCTGATGGTTCGCTTGATACTATGACTCGAAGACCTGCTGACCCGGAAGAAGAACTCCGGTGGATGTCTCAAGAAGTTAGAGGTTACGTTGAAGCTGTTTTGAATAGTTTGGCTGCTAATGTCCCTAAGGCAGTTGTTCTTTGCCAAGTCGAAAAAGCCAAGGAAGACATGCTAAATCAGTTATATAGCTCTATCAGTGCTCAAAGCACAGCGAAGATTGAAGAGCTGCTCCAAGAGGATGGTAATGTAAAGAGACGAAGAGAGAAATACCAGAAACAGTCCTCTCTCCTTTCCAAGCTAACACGCCAACTCAGCATTCATGACAACCGAGCGGCTGCTGCCTCTGGCTGGTCCAATGGTGGTGCAACTGAAAGCAGCCCAAAAACAAGTAGCTCCTCAGGTGATGACTGGAGATCTGCATTTGATGCTGCTGCCAACGGTCCAGTTGACCGTTCATTATCTAGATCTTCATCCAATGGCCATAGTCGACACTATAGCGATCCCGCACAAAATGGTGATGTGAGTGCTGGTCCAAACTCTGGCAGCCGACGTACTCCTAATCGGTTGCCACCTCCACCACCTGGGTCTTCAGGAAGCAGATACTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000266 GO:0000902 GO:0000904 GO:0001101 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006892 GO:0006896 GO:0006897 GO:0006898 GO:0006996 GO:0007005 GO:0007034 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009504 GO:0009506 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009888 GO:0009987 GO:0010015 GO:0010033 GO:0010053 GO:0010054 GO:0012505 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0021700 GO:0022622 GO:0030054 GO:0030135 GO:0030136 GO:0030139 GO:0030154 GO:0030276 GO:0031090 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032878 GO:0032989 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045334 GO:0046907 GO:0048193 GO:0048285 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0065007 GO:0071695 GO:0071840 GO:0071944 GO:0072583 GO:0090558 GO:0090627 GO:0097305 GO:0097708 GO:0098588 GO:0098657 GO:0098805 GO:0099402 GO:1901700 GO:1905392 GO:2000114
KEGG Pathways
Metabolic & Signaling
ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100
Pfam Domains
Protein Families
Dynamin_M Dynamin_N GED PH

Protein Analysis

684

Amino Acids

73.3

Weight (kDa)

7.68

Isoelectric Point (pI)

59.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 43 - 207 4.4e-32 Dynamin family
GED PF02212 499 - 581 1.2e-13 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 518
Acc36I ACCTGC 3 cut(s) 532, 1201, 1489
AccB1I GGYRCC 1 cut(s) 149
AccB7I CCANNNNNTGG 4 cut(s) 1130, 1418, 1985, 2027
AccBSI CCGCTC 2 cut(s) 108, 1778
AccI GTMKAC 2 cut(s) 1092, 1933
AccII CGCG 1 cut(s) 635
AciI CCGC 7 cut(s) 93, 103, 106, 633, 750, 1778, 1950
AclWI GGATC 2 cut(s) 635, 1940
AcoI YGGCCR 1 cut(s) 1924
AcsI RAATTY 4 cut(s) 384, 769, 882, 1034
AcuI CTGAAG 4 cut(s) 348, 561, 1017, 2019
AdeI CACNNNGTG 1 cut(s) 1310
AfaI GTAC 7 cut(s) 409, 595, 987, 1003, 1077, 1286, 1999
AfiI CCNNNNNNNGG 8 cut(s) 52, 1087, 1130, 1391, 1418, 1794, 1985, 2027
AgeI ACCGGT 1 cut(s) 824
AhdI GACNNNNNGTC 2 cut(s) 298, 1099
AjnI CCWGG 6 cut(s) 51, 663, 710, 1086, 1123, 2026
AjuI GAANNNNNNNTTGG 2 cut(s) 1746, 1778
Alw21I GWGCWC 6 cut(s) 229, 495, 832, 1399, 1411, 1648
Alw26I GTCTC 4 cut(s) 945, 1325, 1518, 1693
Alw44I GTGCAC 1 cut(s) 1407
AlwI GGATC 2 cut(s) 635, 1940
AlwNI CAGNNNCTG 1 cut(s) 670
Ama87I CYCGRG 3 cut(s) 222, 375, 440
AoxI GGCC 6 cut(s) 49, 54, 686, 873, 1235, 1924
ApaLI GTGCAC 1 cut(s) 1407
ApoI RAATTY 4 cut(s) 384, 769, 882, 1034
ArsI GACNNNNNNTTYG 2 cut(s) 874, 906
AsiGI ACCGGT 1 cut(s) 824
AspLEI GCGC 2 cut(s) 45, 859
AspS9I GGNCC 7 cut(s) 686, 874, 1235, 1424, 1797, 1886, 1976
AsuC2I CCSGG 3 cut(s) 441, 442, 1490
AsuHPI GGTGA 4 cut(s) 218, 1082, 1859, 1973
AvaI CYCGRG 3 cut(s) 222, 375, 440
AvaII GGWCC 4 cut(s) 1424, 1797, 1886, 1976
AxyI CCTNAGG 2 cut(s) 1572, 1843
BaeGI GKGCMC 1 cut(s) 1411
BalI TGGCCA 1 cut(s) 1926
BanI GGYRCC 1 cut(s) 149
BanII GRGCYC 1 cut(s) 229
BarI GAAGNNNNNNTAC 2 cut(s) 346, 378
BbsI GAAGAC 4 cut(s) 78, 1483, 1617, 2025
Bbv12I GWGCWC 6 cut(s) 229, 495, 832, 1399, 1411, 1648
BccI CCATC 8 cut(s) 248, 578, 584, 697, 1412, 1420, 1445, 1679
BceAI ACGGC 3 cut(s) 41, 344, 1298
BcgI CGANNNNNNTGC 2 cut(s) 265, 299
BciT130I CCWGG 6 cut(s) 53, 665, 712, 1088, 1125, 2028
BclI TGATCA 1 cut(s) 448
BcnI CCSGG 3 cut(s) 441, 442, 1490
BcoDI GTCTC 4 cut(s) 945, 1325, 1518, 1693
BfaI CTAG 6 cut(s) 845, 860, 1005, 1251, 1272, 1908
BfmI CTRYAG 3 cut(s) 284, 657, 1939
BfuAI ACCTGC 3 cut(s) 532, 1201, 1489
BglII AGATCT 3 cut(s) 1007, 1859, 1910
Bme1390I CCNGG 9 cut(s) 53, 441, 442, 665, 712, 1088, 1125, 1490, 2028
Bme18I GGWCC 4 cut(s) 1424, 1797, 1886, 1976
BmeRI GACNNNNNGTC 2 cut(s) 298, 1099
BmeT110I CYCGRG 3 cut(s) 222, 375, 440
BmgT120I GGNCC 7 cut(s) 686, 874, 1235, 1424, 1797, 1886, 1976
BmiI GGNNCC 3 cut(s) 151, 687, 1281
BmrFI CCNGG 9 cut(s) 53, 441, 442, 665, 712, 1088, 1125, 1490, 2028
BmsI GCATC 6 cut(s) 490, 536, 707, 856, 986, 1861
BpiI GAAGAC 4 cut(s) 78, 1483, 1617, 2025
BpmI CTGGAG 3 cut(s) 1040, 1107, 1876
BpuEI CTTGAG 1 cut(s) 1500
BpuMI CCSGG 3 cut(s) 441, 442, 1490
Bsa29I ATCGAT 1 cut(s) 275
BsaBI GATNNNNATC 1 cut(s) 1915
BsaJI CCNNGG 8 cut(s) 46, 440, 710, 711, 981, 1400, 1605, 2027
BsaWI WCCGGW 2 cut(s) 824, 1503
BsaXI ACNNNNNCTCC 6 cut(s) 211, 241, 400, 430, 814, 844
Bsc4I CCNNNNNNNGG 8 cut(s) 52, 1087, 1130, 1391, 1418, 1794, 1985, 2027
Bse118I RCCGGY 2 cut(s) 152, 824
Bse1I ACTGG 3 cut(s) 208, 1859, 1889
Bse21I CCTNAGG 2 cut(s) 1572, 1843
Bse3DI GCAATG 1 cut(s) 148
Bse8I GATNNNNATC 1 cut(s) 1915
BseBI CCWGG 6 cut(s) 53, 665, 712, 1088, 1125, 2028
BseCI ATCGAT 1 cut(s) 275
BseDI CCNNGG 8 cut(s) 46, 440, 710, 711, 981, 1400, 1605, 2027
BseGI GGATG 9 cut(s) 187, 259, 469, 871, 961, 977, 1515, 1690, 1916
BseJI GATNNNNATC 1 cut(s) 1915
BseLI CCNNNNNNNGG 8 cut(s) 52, 1087, 1130, 1391, 1418, 1794, 1985, 2027
BseMI GCAATG 1 cut(s) 148
BseMII CTCAG 6 cut(s) 341, 577, 756, 1320, 1771, 1857
BseNI ACTGG 3 cut(s) 208, 1859, 1889
BseRI GAGGAG 5 cut(s) 88, 100, 822, 1188, 1831
BseSI GKGCMC 1 cut(s) 1411
BseYI CCCAGC 2 cut(s) 303, 876
Bsh1236I CGCG 1 cut(s) 635
Bsh1285I CGRYCG 1 cut(s) 12
BshFI GGCC 6 cut(s) 51, 56, 688, 875, 1237, 1926
BshNI GGYRCC 1 cut(s) 149
BshTI ACCGGT 1 cut(s) 824
BshVI ATCGAT 1 cut(s) 275
BsiEI CGRYCG 1 cut(s) 12
BsiHKAI GWGCWC 6 cut(s) 229, 495, 832, 1399, 1411, 1648
BsiHKCI CYCGRG 3 cut(s) 222, 375, 440
BsiSI CCGG 6 cut(s) 153, 441, 825, 904, 1490, 1504
BslFI GGGAC 2 cut(s) 286, 1553
BslI CCNNNNNNNGG 8 cut(s) 52, 1087, 1130, 1391, 1418, 1794, 1985, 2027
BsmAI GTCTC 4 cut(s) 945, 1325, 1518, 1693
BsmBI CGTCTC 1 cut(s) 1693
BsmFI GGGAC 2 cut(s) 286, 1553
BsmI GAATGC 2 cut(s) 331, 1761
BsnI GGCC 6 cut(s) 51, 56, 688, 875, 1237, 1926
BsoBI CYCGRG 3 cut(s) 222, 375, 440
Bsp1286I GDGCHC 6 cut(s) 229, 495, 832, 1399, 1411, 1648
Bsp143I GATC 7 cut(s) 9, 448, 640, 1007, 1859, 1910, 1945
Bsp19I CCATGG 1 cut(s) 981
BspACI CCGC 7 cut(s) 93, 103, 106, 633, 750, 1778, 1950
BspANI GGCC 6 cut(s) 51, 56, 688, 875, 1237, 1926
BspCNI CTCAG 6 cut(s) 342, 576, 757, 1321, 1770, 1856
BspDI ATCGAT 1 cut(s) 275
BspFNI CGCG 1 cut(s) 635
BspHI TCATGA 1 cut(s) 1765
BspLI GGNNCC 3 cut(s) 151, 687, 1281
BspMAI CTGCAG 2 cut(s) 288, 661
BspMI ACCTGC 3 cut(s) 532, 1201, 1489
BspPI GGATC 2 cut(s) 635, 1940
BspQI GCTCTTC 1 cut(s) 1662
BspT107I GGYRCC 1 cut(s) 149
BsrBI CCGCTC 2 cut(s) 108, 1778
BsrDI GCAATG 1 cut(s) 148
BsrFI RCCGGY 2 cut(s) 152, 824
BsrI ACTGG 3 cut(s) 208, 1859, 1889
BssAI RCCGGY 2 cut(s) 152, 824
BssECI CCNNGG 8 cut(s) 46, 440, 710, 711, 981, 1400, 1605, 2027
BssMI GATC 7 cut(s) 9, 448, 640, 1007, 1859, 1910, 1945
BssT1I CCWWGG 3 cut(s) 46, 981, 1605
Bst2UI CCWGG 6 cut(s) 53, 665, 712, 1088, 1125, 2028
Bst6I CTCTTC 5 cut(s) 9, 1167, 1176, 1662, 1699
BstAPI GCANNNNNTGC 4 cut(s) 337, 656, 1310, 1871
BstDEI CTNAG 8 cut(s) 350, 476, 563, 765, 1329, 1572, 1757, 1843
BstDSI CCRYGG 1 cut(s) 981
BstENI CCTNNNNNAGG 1 cut(s) 1389
BstF5I GGATG 9 cut(s) 187, 259, 469, 871, 961, 977, 1515, 1690, 1916
BstFNI CGCG 1 cut(s) 635
BstHHI GCGC 2 cut(s) 45, 859
BstKTI GATC 7 cut(s) 12, 451, 643, 1010, 1862, 1913, 1948
BstMAI GTCTC 4 cut(s) 945, 1325, 1518, 1693
BstMBI GATC 7 cut(s) 9, 448, 640, 1007, 1859, 1910, 1945
BstMCI CGRYCG 1 cut(s) 12
BstNI CCWGG 6 cut(s) 53, 665, 712, 1088, 1125, 2028
BstNSI RCATGY 1 cut(s) 1618
BstSCI CCNGG 9 cut(s) 51, 439, 440, 663, 710, 1086, 1123, 1488, 2026
BstSFI CTRYAG 3 cut(s) 284, 657, 1939
BstSLI GKGCMC 1 cut(s) 1411
BstUI CGCG 1 cut(s) 635
BstV2I GAAGAC 4 cut(s) 78, 1483, 1617, 2025
BstX2I RGATCY 4 cut(s) 640, 1007, 1859, 1910
BstXI CCANNNNNNTGG 1 cut(s) 1685
BstYI RGATCY 4 cut(s) 640, 1007, 1859, 1910
Bsu15I ATCGAT 1 cut(s) 275
Bsu36I CCTNAGG 2 cut(s) 1572, 1843
BsuRI GGCC 6 cut(s) 51, 56, 688, 875, 1237, 1926
BsuTUI ATCGAT 1 cut(s) 275
BtgI CCRYGG 1 cut(s) 981
BtsCI GGATG 9 cut(s) 187, 259, 469, 871, 961, 977, 1515, 1690, 1916
BtsIMutI CAGTG 1 cut(s) 1648
BveI ACCTGC 3 cut(s) 532, 1201, 1489
CaiI CAGNNNCTG 1 cut(s) 670
CciI TCATGA 1 cut(s) 1765
CfoI GCGC 2 cut(s) 45, 859
Cfr10I RCCGGY 2 cut(s) 152, 824
Cfr13I GGNCC 7 cut(s) 686, 874, 1235, 1424, 1797, 1886, 1976
Cfr9I CCCGGG 1 cut(s) 440
ClaI ATCGAT 1 cut(s) 275
CseI GACGC 1 cut(s) 624
Csp6I GTAC 7 cut(s) 408, 594, 986, 1002, 1076, 1285, 1998
CspAI ACCGGT 1 cut(s) 824
CviAII CATG 5 cut(s) 40, 895, 982, 1615, 1766
CviQI GTAC 7 cut(s) 408, 594, 986, 1002, 1076, 1285, 1998
DdeI CTNAG 8 cut(s) 350, 476, 563, 765, 1329, 1572, 1757, 1843
DpnI GATC 7 cut(s) 11, 450, 642, 1009, 1861, 1912, 1947
DpnII GATC 7 cut(s) 9, 448, 640, 1007, 1859, 1910, 1945
DraI TTTAAA 1 cut(s) 678
DraIII CACNNNGTG 1 cut(s) 1310
DriI GACNNNNNGTC 2 cut(s) 298, 1099
EaeI YGGCCR 1 cut(s) 1924
Eam1104I CTCTTC 5 cut(s) 9, 1167, 1176, 1662, 1699
Eam1105I GACNNNNNGTC 2 cut(s) 298, 1099
EarI CTCTTC 5 cut(s) 9, 1167, 1176, 1662, 1699
Ecl136II GAGCTC 1 cut(s) 227
Eco130I CCWWGG 3 cut(s) 46, 981, 1605
Eco24I GRGCYC 1 cut(s) 229
Eco47I GGWCC 4 cut(s) 1424, 1797, 1886, 1976
Eco53kI GAGCTC 1 cut(s) 227
Eco57I CTGAAG 4 cut(s) 348, 561, 1017, 2019
Eco81I CCTNAGG 2 cut(s) 1572, 1843
Eco88I CYCGRG 3 cut(s) 222, 375, 440
EcoICRI GAGCTC 1 cut(s) 227
EcoNI CCTNNNNNAGG 1 cut(s) 1389
EcoRI GAATTC 1 cut(s) 769
EcoRII CCWGG 6 cut(s) 51, 663, 710, 1086, 1123, 2026
EcoT14I CCWWGG 3 cut(s) 46, 981, 1605
EcoT38I GRGCYC 1 cut(s) 229
ErhI CCWWGG 3 cut(s) 46, 981, 1605
Esp3I CGTCTC 1 cut(s) 1693
FaeI CATG 5 cut(s) 43, 898, 985, 1618, 1769
FaqI GGGAC 2 cut(s) 286, 1553
FatI CATG 5 cut(s) 39, 894, 981, 1614, 1765
FauI CCCGC 3 cut(s) 100, 110, 1957
FbaI TGATCA 1 cut(s) 448
FblI GTMKAC 2 cut(s) 1092, 1933
FokI GGATG 9 cut(s) 174, 266, 476, 878, 964, 968, 1522, 1697, 1903
FriOI GRGCYC 1 cut(s) 229
FspBI CTAG 6 cut(s) 845, 860, 1005, 1251, 1272, 1908
GlaI GCGC 2 cut(s) 44, 858
GsaI CCCAGC 2 cut(s) 307, 880
GsuI CTGGAG 3 cut(s) 1040, 1107, 1876
HaeIII GGCC 6 cut(s) 51, 56, 688, 875, 1237, 1926
HapII CCGG 6 cut(s) 153, 441, 825, 904, 1490, 1504
HgaI GACGC 1 cut(s) 624
HhaI GCGC 2 cut(s) 45, 859
Hin1II CATG 5 cut(s) 43, 898, 985, 1618, 1769
Hin6I GCGC 2 cut(s) 43, 857
HinP1I GCGC 2 cut(s) 43, 857
HincII GTYRAC 3 cut(s) 79, 1894, 1934
HindII GTYRAC 3 cut(s) 79, 1894, 1934
HindIII AAGCTT 1 cut(s) 968
HinfI GANTC 4 cut(s) 35, 467, 1441, 1471
HpaII CCGG 6 cut(s) 153, 441, 825, 904, 1490, 1504
HphI GGTGA 4 cut(s) 218, 1082, 1859, 1973
Hpy166II GTNNAC 7 cut(s) 79, 1078, 1093, 1269, 1409, 1894, 1934
Hpy188III TCNNGA 9 cut(s) 693, 953, 1019, 1031, 1150, 1517, 1766, 1908, 2037
Hpy8I GTNNAC 7 cut(s) 79, 1078, 1093, 1269, 1409, 1894, 1934
Hpy99I CGWCG 4 cut(s) 71, 131, 134, 1998
HpyAV CCTTC 3 cut(s) 992, 1219, 1395
HpyCH4IV ACGT 4 cut(s) 75, 126, 1533, 1996
HpyF3I CTNAG 8 cut(s) 350, 476, 563, 765, 1329, 1572, 1757, 1843
HpySE526I ACGT 4 cut(s) 75, 126, 1533, 1996
Hsp92II CATG 5 cut(s) 43, 898, 985, 1618, 1769
HspAI GCGC 2 cut(s) 43, 857
Ksp22I TGATCA 1 cut(s) 448
Kzo9I GATC 7 cut(s) 9, 448, 640, 1007, 1859, 1910, 1945
LguI GCTCTTC 1 cut(s) 1662
LmnI GCTCC 8 cut(s) 113, 232, 835, 1021, 1201, 1394, 1680, 1844
LweI GCATC 6 cut(s) 490, 536, 707, 856, 986, 1861
MaeI CTAG 6 cut(s) 845, 860, 1005, 1251, 1272, 1908
MaeII ACGT 4 cut(s) 75, 126, 1533, 1996
MaeIII GTNAC 2 cut(s) 927, 1529
MalI GATC 7 cut(s) 11, 450, 642, 1009, 1861, 1912, 1947
MbiI CCGCTC 2 cut(s) 108, 1778
MboI GATC 7 cut(s) 9, 448, 640, 1007, 1859, 1910, 1945
MflI RGATCY 4 cut(s) 640, 1007, 1859, 1910
MhlI GDGCHC 6 cut(s) 229, 495, 832, 1399, 1411, 1648
MlsI TGGCCA 1 cut(s) 1926
MluCI AATT 8 cut(s) 180, 384, 425, 504, 769, 852, 882, 1034
MluNI TGGCCA 1 cut(s) 1926
MlyI GAGTC 4 cut(s) 29, 476, 1450, 1465
MmeI TCCRAC 3 cut(s) 586, 1405, 1451
Mox20I TGGCCA 1 cut(s) 1926
MscI TGGCCA 1 cut(s) 1926
MseI TTAA 4 cut(s) 179, 677, 810, 1263
MslI CAYNNNNRTG 1 cut(s) 498
Msp20I TGGCCA 1 cut(s) 1926
MspA1I CMGCKG 1 cut(s) 164
MspI CCGG 6 cut(s) 153, 441, 825, 904, 1490, 1504
MspR9I CCNGG 9 cut(s) 53, 441, 442, 665, 712, 1088, 1125, 1490, 2028
Mva1269I GAATGC 2 cut(s) 331, 1761
MvaI CCWGG 6 cut(s) 53, 665, 712, 1088, 1125, 2028
MvnI CGCG 1 cut(s) 635
NciI CCSGG 3 cut(s) 441, 442, 1490
NcoI CCATGG 1 cut(s) 981
NdeII GATC 7 cut(s) 9, 448, 640, 1007, 1859, 1910, 1945
NlaIII CATG 5 cut(s) 43, 898, 985, 1618, 1769
NlaIV GGNNCC 3 cut(s) 151, 687, 1281
NmeAIII GCCGAG 1 cut(s) 117
NspI RCATGY 1 cut(s) 1618
PaeR7I CTCGAG 1 cut(s) 222
PagI TCATGA 1 cut(s) 1765
PasI CCCWGGG 1 cut(s) 711
PciSI GCTCTTC 1 cut(s) 1662
PctI GAATGC 2 cut(s) 331, 1761
PflFI GACNNNGTC 1 cut(s) 1440
PflMI CCANNNNNTGG 4 cut(s) 1130, 1418, 1985, 2027
PinAI ACCGGT 1 cut(s) 824
Ple19I CGATCG 1 cut(s) 12
PleI GAGTC 4 cut(s) 29, 475, 1449, 1465
PpsI GAGTC 4 cut(s) 29, 475, 1449, 1465
PsiI TTATAA 1 cut(s) 518
Psp124BI GAGCTC 1 cut(s) 229
Psp6I CCWGG 6 cut(s) 51, 663, 710, 1086, 1123, 2026
PspFI CCCAGC 2 cut(s) 303, 876
PspGI CCWGG 6 cut(s) 51, 663, 710, 1086, 1123, 2026
PspN4I GGNNCC 3 cut(s) 151, 687, 1281
PspPI GGNCC 7 cut(s) 686, 874, 1235, 1424, 1797, 1886, 1976
PspXI VCTCGAGB 1 cut(s) 222
PstI CTGCAG 2 cut(s) 288, 661
PstNI CAGNNNCTG 1 cut(s) 670
PsuI RGATCY 4 cut(s) 640, 1007, 1859, 1910
PsyI GACNNNGTC 1 cut(s) 1440
PvuI CGATCG 1 cut(s) 12
PvuII CAGCTG 1 cut(s) 164
RsaI GTAC 7 cut(s) 409, 595, 987, 1003, 1077, 1286, 1999
RsaNI GTAC 7 cut(s) 408, 594, 986, 1002, 1076, 1285, 1998
RseI CAYNNNNRTG 1 cut(s) 498
SacI GAGCTC 1 cut(s) 229
SalI GTCGAC 1 cut(s) 1932
SapI GCTCTTC 1 cut(s) 1662
SaqAI TTAA 4 cut(s) 179, 677, 810, 1263
Sau3AI GATC 7 cut(s) 9, 448, 640, 1007, 1859, 1910, 1945
Sau96I GGNCC 7 cut(s) 686, 874, 1235, 1424, 1797, 1886, 1976
SchI GAGTC 4 cut(s) 29, 476, 1450, 1465
ScrFI CCNGG 9 cut(s) 53, 441, 442, 665, 712, 1088, 1125, 1490, 2028
SduI GDGCHC 6 cut(s) 229, 495, 832, 1399, 1411, 1648
SfaNI GCATC 6 cut(s) 490, 536, 707, 856, 986, 1861
SfcI CTRYAG 3 cut(s) 284, 657, 1939
Sfr274I CTCGAG 1 cut(s) 222
SinI GGWCC 4 cut(s) 1424, 1797, 1886, 1976
SlaI CTCGAG 1 cut(s) 222
SmaI CCCGGG 1 cut(s) 442
SmiMI CAYNNNNRTG 1 cut(s) 498
SmlI CTYRAG 2 cut(s) 222, 1515
SmoI CTYRAG 2 cut(s) 222, 1515
Sse9I AATT 8 cut(s) 180, 384, 425, 504, 769, 852, 882, 1034
SsiI CCGC 7 cut(s) 93, 103, 106, 633, 750, 1778, 1950
SspI AATATT 1 cut(s) 1168
SspMI CTAG 6 cut(s) 845, 860, 1005, 1251, 1272, 1908
SstI GAGCTC 1 cut(s) 229
StyD4I CCNGG 9 cut(s) 51, 439, 440, 663, 710, 1086, 1123, 1488, 2026
StyI CCWWGG 3 cut(s) 46, 981, 1605
TaiI ACGT 4 cut(s) 78, 129, 1536, 1999
TaqI TCGA 7 cut(s) 12, 223, 275, 740, 1474, 1596, 1933
TasI AATT 8 cut(s) 180, 384, 425, 504, 769, 852, 882, 1034
TatI WGTACW 1 cut(s) 407
TauI GCSGC 3 cut(s) 108, 635, 1781
Tru1I TTAA 4 cut(s) 179, 677, 810, 1263
Tru9I TTAA 4 cut(s) 179, 677, 810, 1263
TscAI CASTG 1 cut(s) 1648
TspDTI ATGAA 6 cut(s) 249, 396, 911, 1754, 1890, 1905
TspGWI ACGGA 3 cut(s) 415, 469, 1272
TspMI CCCGGG 1 cut(s) 440
TspRI CASTG 1 cut(s) 1648
Tth111I GACNNNGTC 1 cut(s) 1440
Van91I CCANNNNNTGG 4 cut(s) 1130, 1418, 1985, 2027
VneI GTGCAC 1 cut(s) 1407
VpaK11BI GGWCC 4 cut(s) 1424, 1797, 1886, 1976
XagI CCTNNNNNAGG 1 cut(s) 1389
XapI RAATTY 4 cut(s) 384, 769, 882, 1034
XbaI TCTAGA 1 cut(s) 1907
XceI RCATGY 1 cut(s) 1618
XhoI CTCGAG 1 cut(s) 222
XmaI CCCGGG 1 cut(s) 440
XmiI GTMKAC 2 cut(s) 1092, 1933
XspI CTAG 6 cut(s) 845, 860, 1005, 1251, 1272, 1908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.