Rh6BG216600

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
N/A
Physical Location & Seq
Reverse (-)
40855453 .. 40856232
780 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG216600.1

Sequence Viewer

Length: 780 bp
ATGAATCGTGGCTATCGTCTCACGATTGATGCTAATGGAATACTCCGGTTGTACTCCTACAGTTTGGGTCAAAATGATTCCAGGTCAATTGAGTGGTCACCACCAAATGTTGATAAGTGTGCCCCTCCTGGACTCTGTGGCCAAAATTCTTATTGTGTTCTTGGGGAACCGAAACCTTCTTGTGTATGTCTCCCTGGTTTCGTTTTCATCGACGAGGGCCAAAGATATTTAGGCTGCAAGAGAAACTTGAGTACATTTGGTTGCAAAGGTGAGAATGAAACTTCATATTCTATTGTTAATGTGGATAACATAGATTGGGAAAACACTTCATACTCTATTCTATCATTGGATAAGACTGCTTGTAAAGAGGATTGTTTGATGGATTGTGACTGTAAAGCTGCGATTTTTAGGGACCAGCAGTGCGGAAAACAAAAGCTCCCTCTAATTTTTGGAAGAACTAGCCCAACCAACATGGCGGTGACAACCTTTGTCAAAAAGGGTACTACTGATGAGAATTCAGGTACAAAAAGGGTGAGCATGGGAAGAAAAAAATTTGAAATGATCAAAGTTATATTTATCAGCAACATTGCAACTTTAACTCTTTCACTTGTTATTATGGCACTTACTAGTGTTGTTATATATAGATATCTTGTTTGGGATTACCGAAAAGTTACAAATTCAGCTGGTGAAGGGTTAATTGAAGGTGTTACACTGCGGTCATATACATATTGTGAACTTGAAAAGGCAACTAAAGGCTTCACCAATCAAGTGGGAAAATGA

Protein Analysis

259

Amino Acids

28.85

Weight (kDa)

8.61

Isoelectric Point (pI)

28.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 423, 476, 715
AcoI YGGCCR 1 cut(s) 139
AcsI RAATTY 4 cut(s) 145, 514, 551, 676
AfaI GTAC 4 cut(s) 53, 253, 502, 523
AgsI TTSAA 3 cut(s) 557, 701, 740
AhlI ACTAGT 1 cut(s) 626
AjnI CCWGG 3 cut(s) 80, 127, 193
AluBI AGCT 3 cut(s) 398, 436, 683
AluI AGCT 3 cut(s) 398, 436, 683
Alw26I GTCTC 2 cut(s) 23, 194
AoxI GGCC 2 cut(s) 139, 217
ApeKI GCWGC 2 cut(s) 234, 398
ApoI RAATTY 4 cut(s) 145, 514, 551, 676
AspS9I GGNCC 2 cut(s) 217, 412
AsuHPI GGTGA 6 cut(s) 90, 281, 490, 544, 698, 751
AvaII GGWCC 1 cut(s) 412
BaeGI GKGCMC 1 cut(s) 124
BalI TGGCCA 1 cut(s) 141
BbvI GCAGC 2 cut(s) 221, 385
BccI CCATC 1 cut(s) 373
BciT130I CCWGG 3 cut(s) 82, 129, 195
BclI TGATCA 1 cut(s) 561
BcoDI GTCTC 2 cut(s) 23, 194
BcuI ACTAGT 1 cut(s) 626
BfaI CTAG 2 cut(s) 459, 627
BfmI CTRYAG 1 cut(s) 58
BisI GCNGC 2 cut(s) 235, 399
BlsI GCNGC 2 cut(s) 236, 400
Bme1390I CCNGG 3 cut(s) 82, 129, 195
Bme18I GGWCC 1 cut(s) 412
BmgT120I GGNCC 2 cut(s) 217, 412
BmiI GGNNCC 2 cut(s) 168, 413
BmrFI CCNGG 3 cut(s) 82, 129, 195
BmsI GCATC 1 cut(s) 19
BpuEI CTTGAG 1 cut(s) 268
BsaJI CCNNGG 1 cut(s) 193
BsaWI WCCGGW 1 cut(s) 45
BsaXI ACNNNNNCTCC 2 cut(s) 420, 450
Bse3DI GCAATG 1 cut(s) 585
BseBI CCWGG 3 cut(s) 82, 129, 195
BseDI CCNNGG 1 cut(s) 193
BseMI GCAATG 1 cut(s) 585
BseSI GKGCMC 1 cut(s) 124
BseXI GCAGC 2 cut(s) 221, 385
BshFI GGCC 2 cut(s) 141, 219
BsiSI CCGG 1 cut(s) 46
BslFI GGGAC 1 cut(s) 425
BsmAI GTCTC 2 cut(s) 23, 194
BsmBI CGTCTC 1 cut(s) 23
BsmFI GGGAC 1 cut(s) 425
BsnI GGCC 2 cut(s) 141, 219
Bsp1286I GDGCHC 1 cut(s) 124
Bsp143I GATC 1 cut(s) 561
BspACI CCGC 3 cut(s) 423, 476, 715
BspANI GGCC 2 cut(s) 141, 219
BspLI GGNNCC 2 cut(s) 168, 413
BsrDI GCAATG 1 cut(s) 585
BssECI CCNNGG 1 cut(s) 193
BssMI GATC 1 cut(s) 561
Bst2UI CCWGG 3 cut(s) 82, 129, 195
Bst4CI ACNGT 2 cut(s) 62, 392
BstEII GGTNACC 1 cut(s) 96
BstKTI GATC 1 cut(s) 564
BstMAI GTCTC 2 cut(s) 23, 194
BstMBI GATC 1 cut(s) 561
BstNI CCWGG 3 cut(s) 82, 129, 195
BstPI GGTNACC 1 cut(s) 96
BstSCI CCNGG 3 cut(s) 80, 127, 193
BstSFI CTRYAG 1 cut(s) 58
BstSLI GKGCMC 1 cut(s) 124
BstV1I GCAGC 2 cut(s) 221, 385
BstXI CCANNNNNNTGG 1 cut(s) 769
BsuRI GGCC 2 cut(s) 141, 219
BtsI GCAGTG 2 cut(s) 425, 710
BtsIMutI CAGTG 2 cut(s) 425, 710
Cfr13I GGNCC 2 cut(s) 217, 412
Csp6I GTAC 4 cut(s) 52, 252, 501, 522
CviAII CATG 2 cut(s) 472, 538
CviJI RGCY 9 cut(s) 12, 141, 219, 234, 398, 436, 462, 683, 756
CviKI_1 RGCY 9 cut(s) 12, 141, 219, 234, 398, 436, 462, 683, 756
CviQI GTAC 4 cut(s) 52, 252, 501, 522
DpnI GATC 1 cut(s) 563
DpnII GATC 1 cut(s) 561
EaeI YGGCCR 1 cut(s) 139
Eco32I GATATC 1 cut(s) 647
Eco47I GGWCC 1 cut(s) 412
Eco91I GGTNACC 1 cut(s) 96
EcoO65I GGTNACC 1 cut(s) 96
EcoRI GAATTC 1 cut(s) 514
EcoRII CCWGG 3 cut(s) 80, 127, 193
EcoRV GATATC 1 cut(s) 647
Esp3I CGTCTC 1 cut(s) 23
FaeI CATG 2 cut(s) 475, 541
FalI AAGNNNNNCTT 2 cut(s) 230, 262
FaqI GGGAC 1 cut(s) 425
FatI CATG 2 cut(s) 471, 537
FbaI TGATCA 1 cut(s) 561
Fnu4HI GCNGC 2 cut(s) 235, 399
Fsp4HI GCNGC 2 cut(s) 235, 399
FspBI CTAG 2 cut(s) 459, 627
GluI GCNGC 2 cut(s) 235, 399
HaeIII GGCC 2 cut(s) 141, 219
HapII CCGG 1 cut(s) 46
Hin1II CATG 2 cut(s) 475, 541
HinfI GANTC 3 cut(s) 4, 77, 132
HpaII CCGG 1 cut(s) 46
HphI GGTGA 6 cut(s) 90, 281, 490, 544, 698, 751
Hpy166II GTNNAC 1 cut(s) 734
Hpy188III TCNNGA 1 cut(s) 22
Hpy8I GTNNAC 1 cut(s) 734
Hpy99I CGWCG 1 cut(s) 215
HpyAV CCTTC 3 cut(s) 186, 683, 695
HpyCH4III ACNGT 2 cut(s) 62, 392
HpyCH4V TGCA 3 cut(s) 237, 264, 590
Hsp92II CATG 2 cut(s) 475, 541
Ksp22I TGATCA 1 cut(s) 561
Kzo9I GATC 1 cut(s) 561
LmnI GCTCC 1 cut(s) 441
Lsp1109I GCAGC 2 cut(s) 221, 385
LweI GCATC 1 cut(s) 19
MaeI CTAG 2 cut(s) 459, 627
MaeIII GTNAC 5 cut(s) 96, 386, 478, 670, 706
MalI GATC 1 cut(s) 563
MboI GATC 1 cut(s) 561
MboII GAAGA 2 cut(s) 465, 555
MfeI CAATTG 1 cut(s) 87
MhlI GDGCHC 1 cut(s) 124
MlsI TGGCCA 1 cut(s) 141
MluCI AATT 7 cut(s) 87, 145, 444, 514, 551, 676, 696
MluNI TGGCCA 1 cut(s) 141
MlyI GAGTC 1 cut(s) 126
MnlI CCTC 4 cut(s) 135, 208, 361, 450
Mox20I TGGCCA 1 cut(s) 141
MscI TGGCCA 1 cut(s) 141
MseI TTAA 3 cut(s) 297, 596, 695
MslI CAYNNNNRTG 1 cut(s) 476
Msp20I TGGCCA 1 cut(s) 141
MspA1I CMGCKG 1 cut(s) 683
MspI CCGG 1 cut(s) 46
MspR9I CCNGG 3 cut(s) 82, 129, 195
MunI CAATTG 1 cut(s) 87
MvaI CCWGG 3 cut(s) 82, 129, 195
NdeII GATC 1 cut(s) 561
NlaIII CATG 2 cut(s) 475, 541
NlaIV GGNNCC 2 cut(s) 168, 413
NmuCI GTSAC 3 cut(s) 96, 386, 478
PcsI WCGNNNNNNNCGW 2 cut(s) 13, 207
PfeI GAWTC 2 cut(s) 4, 77
PfoI TCCNGGA 1 cut(s) 127
PkrI GCNGC 2 cut(s) 236, 400
PleI GAGTC 1 cut(s) 126
PpsI GAGTC 1 cut(s) 126
Psp6I CCWGG 3 cut(s) 80, 127, 193
PspEI GGTNACC 1 cut(s) 96
PspGI CCWGG 3 cut(s) 80, 127, 193
PspN4I GGNNCC 2 cut(s) 168, 413
PspPI GGNCC 2 cut(s) 217, 412
PvuII CAGCTG 1 cut(s) 683
RsaI GTAC 4 cut(s) 53, 253, 502, 523
RsaNI GTAC 4 cut(s) 52, 252, 501, 522
RseI CAYNNNNRTG 1 cut(s) 476
SaqAI TTAA 3 cut(s) 297, 596, 695
SatI GCNGC 2 cut(s) 235, 399
Sau3AI GATC 1 cut(s) 561
Sau96I GGNCC 2 cut(s) 217, 412
SchI GAGTC 1 cut(s) 126
ScrFI CCNGG 3 cut(s) 82, 129, 195
SduI GDGCHC 1 cut(s) 124
SetI ASST 9 cut(s) 86, 178, 271, 400, 438, 488, 523, 685, 706
SfaNI GCATC 1 cut(s) 19
SfcI CTRYAG 1 cut(s) 58
SinI GGWCC 1 cut(s) 412
SmiMI CAYNNNNRTG 1 cut(s) 476
SmlI CTYRAG 1 cut(s) 247
SmoI CTYRAG 1 cut(s) 247
SpeI ACTAGT 1 cut(s) 626
Sse9I AATT 7 cut(s) 87, 145, 444, 514, 551, 676, 696
SsiI CCGC 3 cut(s) 423, 476, 715
SspMI CTAG 2 cut(s) 459, 627
StyD4I CCNGG 3 cut(s) 80, 127, 193
TaaI ACNGT 2 cut(s) 62, 392
TaqI TCGA 1 cut(s) 210
TasI AATT 7 cut(s) 87, 145, 444, 514, 551, 676, 696
TatI WGTACW 2 cut(s) 51, 251
TfiI GAWTC 2 cut(s) 4, 77
Tru1I TTAA 3 cut(s) 297, 596, 695
Tru9I TTAA 3 cut(s) 297, 596, 695
TscAI CASTG 2 cut(s) 425, 717
TseFI GTSAC 3 cut(s) 96, 386, 478
TseI GCWGC 2 cut(s) 234, 398
Tsp45I GTSAC 3 cut(s) 96, 386, 478
TspDTI ATGAA 5 cut(s) 17, 196, 273, 291, 318
TspRI CASTG 2 cut(s) 425, 717
VpaK11BI GGWCC 1 cut(s) 412
XapI RAATTY 4 cut(s) 145, 514, 551, 676
XspI CTAG 2 cut(s) 459, 627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.