Rh6BG357000

Universal stress protein family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
N/A
Physical Location & Seq
Reverse (-)
58714044 .. 58714358
315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG357000.1

Sequence Viewer

Length: 315 bp
ATGCGTTCCCTATATAAACACAAGTCTATGCTCACAACTTACTTCAACACCAAATCGAAAACTTCTCCCCACAAATTCGTCCAAGGCTCTAGCATTGTTGCTGTGTATTCACAAGGTTTTCAAGAAGAAGAAAATGGGAGGAGGAATGGAGGCAAACAAGAACAGATTCGTGGAGGAGTGGGGCGCAGTCAGAGAAAATCTGGAGCACAACTTCCGCTGGACTCGCCGCAACTTTGCCATCATCGGAATCTTTGGCATCGCTATCCCCATCTTAGTCTACAAGGGCATCGTCTGAGAATTCCATATGCAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

12.03

Weight (kDa)

10.8

Isoelectric Point (pI)

72.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 277
AciI CCGC 2 cut(s) 215, 227
AcsI RAATTY 2 cut(s) 74, 297
AgsI TTSAA 2 cut(s) 46, 122
Alw21I GWGCWC 1 cut(s) 208
ApoI RAATTY 2 cut(s) 74, 297
Asp700I GAANNNNTTC 1 cut(s) 165
AspLEI GCGC 1 cut(s) 186
Bbv12I GWGCWC 1 cut(s) 208
BccI CCATC 2 cut(s) 246, 276
BfaI CTAG 1 cut(s) 90
BisI GCNGC 1 cut(s) 227
BlsI GCNGC 1 cut(s) 228
BmsI GCATC 2 cut(s) 265, 295
BpmI CTGGAG 1 cut(s) 222
BsaJI CCNNGG 1 cut(s) 82
BseDI CCNNGG 1 cut(s) 82
BseMII CTCAG 1 cut(s) 284
BseRI GAGGAG 2 cut(s) 154, 189
BsiHKAI GWGCWC 1 cut(s) 208
Bsp1286I GDGCHC 1 cut(s) 208
BspACI CCGC 2 cut(s) 215, 227
BspCNI CTCAG 1 cut(s) 285
BssECI CCNNGG 1 cut(s) 82
BssT1I CCWWGG 1 cut(s) 82
BstDEI CTNAG 2 cut(s) 272, 293
BstHHI GCGC 1 cut(s) 186
BstMWI GCNNNNNNNGC 1 cut(s) 223
BtgZI GCGATG 1 cut(s) 242
CfoI GCGC 1 cut(s) 186
CviJI RGCY 1 cut(s) 87
CviKI_1 RGCY 1 cut(s) 87
DdeI CTNAG 2 cut(s) 272, 293
Eco130I CCWWGG 1 cut(s) 82
EcoRI GAATTC 1 cut(s) 297
EcoT14I CCWWGG 1 cut(s) 82
ErhI CCWWGG 1 cut(s) 82
FaiI YATR 5 cut(s) 13, 15, 29, 304, 306
FauNDI CATATG 1 cut(s) 304
FblI GTMKAC 1 cut(s) 277
Fnu4HI GCNGC 1 cut(s) 227
Fsp4HI GCNGC 1 cut(s) 227
FspBI CTAG 1 cut(s) 90
GlaI GCGC 1 cut(s) 185
GluI GCNGC 1 cut(s) 227
GsuI CTGGAG 1 cut(s) 222
HhaI GCGC 1 cut(s) 186
Hin6I GCGC 1 cut(s) 184
HinP1I GCGC 1 cut(s) 184
HinfI GANTC 3 cut(s) 166, 221, 247
Hpy166II GTNNAC 1 cut(s) 278
Hpy188I TCNGA 3 cut(s) 192, 246, 294
Hpy188III TCNNGA 2 cut(s) 122, 201
Hpy8I GTNNAC 1 cut(s) 278
HpyCH4V TGCA 1 cut(s) 308
HpyF10VI GCNNNNNNNGC 1 cut(s) 223
HpyF3I CTNAG 2 cut(s) 272, 293
HspAI GCGC 1 cut(s) 184
LmnI GCTCC 1 cut(s) 203
LpnPI CCDG 2 cut(s) 186, 203
LweI GCATC 2 cut(s) 265, 295
MaeI CTAG 1 cut(s) 90
MboII GAAGA 2 cut(s) 137, 140
MhlI GDGCHC 1 cut(s) 208
MluCI AATT 2 cut(s) 74, 297
MlyI GAGTC 1 cut(s) 215
MnlI CCTC 4 cut(s) 132, 135, 143, 167
MroXI GAANNNNTTC 1 cut(s) 165
MspA1I CMGCKG 1 cut(s) 217
MwoI GCNNNNNNNGC 1 cut(s) 223
NdeI CATATG 1 cut(s) 304
PdmI GAANNNNTTC 1 cut(s) 165
PfeI GAWTC 2 cut(s) 166, 247
PkrI GCNGC 1 cut(s) 228
PleI GAGTC 1 cut(s) 215
PpsI GAGTC 1 cut(s) 215
SatI GCNGC 1 cut(s) 227
SchI GAGTC 1 cut(s) 215
SduI GDGCHC 1 cut(s) 208
SetI ASST 1 cut(s) 118
SfaNI GCATC 2 cut(s) 265, 295
Sse9I AATT 2 cut(s) 74, 297
SsiI CCGC 2 cut(s) 215, 227
SspMI CTAG 1 cut(s) 90
StyI CCWWGG 1 cut(s) 82
TaqI TCGA 1 cut(s) 56
TasI AATT 2 cut(s) 74, 297
TauI GCSGC 1 cut(s) 229
TfiI GAWTC 2 cut(s) 166, 247
XapI RAATTY 2 cut(s) 74, 297
XmiI GTMKAC 1 cut(s) 277
XmnI GAANNNNTTC 1 cut(s) 165
XspI CTAG 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.