Rh6BG388600

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
N/A
Physical Location & Seq
Reverse (-)
61715152 .. 61715827
676 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG388600.1

Sequence Viewer

Length: 358 bp
ATGAAGCTTTTTTTTTTTGTTGTTGTAAATTTTGTTGCTTTTGTGCCTGTAGACCAAAACAAGCCATGCCCTTTTTGTGTTGGAGCCACAGTTGTACCTGACCCGCTTGTTTCTTCCATGTCTGCTCCTCTTCCCCCACCAAGCTTCTCACCCACTTCCCCAATTGCTTCATCAATGGCTTCTTTCTCTCCAGGAATTCAACAAGGAAGTGAAGGAAATCAAATGGATTCGCATAAGAAACCGCTCATTGCCCTCATTGTGACTTGTGCAACACTTGGTGCAGTTTTGTTGTCACTATTGTGTTTGTGGTTTTATCACAGCAAGTACAAGTTCCTTAAGAGAAATGCTCAGAGCTCAG

Protein Analysis

119

Amino Acids

12.82

Weight (kDa)

9.05

Isoelectric Point (pI)

57.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 244
AccI GTMKAC 1 cut(s) 51
AciI CCGC 2 cut(s) 104, 242
AcsI RAATTY 2 cut(s) 28, 195
AdeI CACNNNGTG 1 cut(s) 278
AfaI GTAC 2 cut(s) 96, 326
AflII CTTAAG 1 cut(s) 335
AgsI TTSAA 1 cut(s) 200
AjnI CCWGG 1 cut(s) 190
AleI CACNNNNGTG 1 cut(s) 298
AluBI AGCT 3 cut(s) 7, 144, 354
AluI AGCT 3 cut(s) 7, 144, 354
Alw21I GWGCWC 1 cut(s) 356
ApoI RAATTY 2 cut(s) 28, 195
AsuHPI GGTGA 1 cut(s) 141
BaeI ACNNNNGTAYC 2 cut(s) 78, 111
BanII GRGCYC 1 cut(s) 356
Bbv12I GWGCWC 1 cut(s) 356
BciT130I CCWGG 1 cut(s) 192
BfmI CTRYAG 1 cut(s) 48
BfrI CTTAAG 1 cut(s) 335
Bme1390I CCNGG 1 cut(s) 192
BmiI GGNNCC 1 cut(s) 85
BmrFI CCNGG 1 cut(s) 192
BplI GAGNNNNNCTC 1 cut(s) 331
BpmI CTGGAG 1 cut(s) 174
BsaXI ACNNNNNCTCC 2 cut(s) 75, 105
Bse3DI GCAATG 1 cut(s) 246
BseBI CCWGG 1 cut(s) 192
BseMI GCAATG 1 cut(s) 246
BseRI GAGGAG 1 cut(s) 117
BsgI GTGCAG 1 cut(s) 300
BsiHKAI GWGCWC 1 cut(s) 356
Bsp1286I GDGCHC 1 cut(s) 356
BspACI CCGC 2 cut(s) 104, 242
BspLI GGNNCC 1 cut(s) 85
BspTI CTTAAG 1 cut(s) 335
BsrBI CCGCTC 1 cut(s) 244
BsrDI GCAATG 1 cut(s) 246
Bst2UI CCWGG 1 cut(s) 192
Bst4CI ACNGT 1 cut(s) 91
Bst6I CTCTTC 1 cut(s) 135
BstAFI CTTAAG 1 cut(s) 335
BstDEI CTNAG 2 cut(s) 348, 355
BstNI CCWGG 1 cut(s) 192
BstSCI CCNGG 1 cut(s) 190
BstSFI CTRYAG 1 cut(s) 48
Csp6I GTAC 2 cut(s) 95, 325
CviAII CATG 2 cut(s) 66, 118
CviJI RGCY 6 cut(s) 7, 64, 86, 144, 179, 354
CviKI_1 RGCY 6 cut(s) 7, 64, 86, 144, 179, 354
CviQI GTAC 2 cut(s) 95, 325
DdeI CTNAG 2 cut(s) 348, 355
DraIII CACNNNGTG 1 cut(s) 278
Eam1104I CTCTTC 1 cut(s) 135
EarI CTCTTC 1 cut(s) 135
Ecl136II GAGCTC 1 cut(s) 354
Eco24I GRGCYC 1 cut(s) 356
Eco53kI GAGCTC 1 cut(s) 354
EcoICRI GAGCTC 1 cut(s) 354
EcoRI GAATTC 1 cut(s) 195
EcoRII CCWGG 1 cut(s) 190
EcoT38I GRGCYC 1 cut(s) 356
FaeI CATG 2 cut(s) 69, 121
FaiI YATR 3 cut(s) 67, 119, 234
FatI CATG 2 cut(s) 65, 117
FauI CCCGC 1 cut(s) 111
FblI GTMKAC 1 cut(s) 51
FriOI GRGCYC 1 cut(s) 356
GsuI CTGGAG 1 cut(s) 174
Hin1II CATG 2 cut(s) 69, 121
HindIII AAGCTT 2 cut(s) 5, 142
HinfI GANTC 1 cut(s) 227
HphI GGTGA 1 cut(s) 141
Hpy166II GTNNAC 1 cut(s) 52
Hpy188I TCNGA 1 cut(s) 351
Hpy8I GTNNAC 1 cut(s) 52
HpyAV CCTTC 1 cut(s) 206
HpyCH4III ACNGT 1 cut(s) 91
HpyCH4V TGCA 2 cut(s) 269, 281
HpyF3I CTNAG 2 cut(s) 348, 355
Hsp92II CATG 2 cut(s) 69, 121
LmnI GCTCC 2 cut(s) 83, 130
LpnPI CCDG 4 cut(s) 60, 111, 177, 204
MaeIII GTNAC 2 cut(s) 259, 291
MbiI CCGCTC 1 cut(s) 244
MboII GAAGA 2 cut(s) 105, 122
MfeI CAATTG 1 cut(s) 162
MhlI GDGCHC 1 cut(s) 356
MluCI AATT 3 cut(s) 28, 162, 195
MmeI TCCRAC 1 cut(s) 61
MnlI CCTC 2 cut(s) 138, 263
MseI TTAA 1 cut(s) 336
MslI CAYNNNNRTG 1 cut(s) 298
MspCI CTTAAG 1 cut(s) 335
MspR9I CCNGG 1 cut(s) 192
MunI CAATTG 1 cut(s) 162
MvaI CCWGG 1 cut(s) 192
NlaIII CATG 2 cut(s) 69, 121
NlaIV GGNNCC 1 cut(s) 85
NmuCI GTSAC 2 cut(s) 259, 291
OliI CACNNNNGTG 1 cut(s) 298
PfeI GAWTC 1 cut(s) 227
PfoI TCCNGGA 1 cut(s) 190
Psp124BI GAGCTC 1 cut(s) 356
Psp6I CCWGG 1 cut(s) 190
PspGI CCWGG 1 cut(s) 190
PspN4I GGNNCC 1 cut(s) 85
RsaI GTAC 2 cut(s) 96, 326
RsaNI GTAC 2 cut(s) 95, 325
RseI CAYNNNNRTG 1 cut(s) 298
SacI GAGCTC 1 cut(s) 356
SaqAI TTAA 1 cut(s) 336
ScrFI CCNGG 1 cut(s) 192
SduI GDGCHC 1 cut(s) 356
SetI ASST 4 cut(s) 9, 100, 146, 356
SfcI CTRYAG 1 cut(s) 48
SmiMI CAYNNNNRTG 1 cut(s) 298
SmlI CTYRAG 1 cut(s) 335
SmoI CTYRAG 1 cut(s) 335
Sse9I AATT 3 cut(s) 28, 162, 195
SsiI CCGC 2 cut(s) 104, 242
SstI GAGCTC 1 cut(s) 356
StyD4I CCNGG 1 cut(s) 190
TaaI ACNGT 1 cut(s) 91
TasI AATT 3 cut(s) 28, 162, 195
TatI WGTACW 1 cut(s) 324
TfiI GAWTC 1 cut(s) 227
Tru1I TTAA 1 cut(s) 336
Tru9I TTAA 1 cut(s) 336
TseFI GTSAC 2 cut(s) 259, 291
Tsp45I GTSAC 2 cut(s) 259, 291
TspDTI ATGAA 2 cut(s) 17, 159
Vha464I CTTAAG 1 cut(s) 335
XapI RAATTY 2 cut(s) 28, 195
XmiI GTMKAC 1 cut(s) 51
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.