Rh6BG488200

receptor protein kinase ZmPK1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
N/A
Physical Location & Seq
Forward (+)
69204859 .. 69212073
7215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG488200.1

Sequence Viewer

Length: 2505 bp
ATGGGAAAGCTTTGCTTCACCAACGAACACTCTTTTGCCTTATCAGCCACTAACAAGGAACACCAAGAGCTCGTATCTTCTAGAAGCCTCACCAACTCCTCCTCCGGCTTCTACAAGCTCTTTTTCGATAATGACAACACCCTCCGGCCTCTCTACGATGGCCCCGAAGTTTTGAGTATTTACTGGCCTGACCCTTGGCTTCTAATTAGTTACCGAGCTGAGAGGTCCTCGTACAACAACAGTAGAATCGCAATTTTCGATGCATTAGGGCACCTCAGTGCATCCGATGACTTTACCGTTTTGTCCTCGGATTACGGTGCCAAGGTGCAGAGAATTGTGAAGGTGGATGTGGATGGTAACGTCCGAATGTACAGTCGAAAGAAGCCTGGAGAGACCTGGGGTGTTACGTGGCAAGCCATTTCGCAACCATGCAAAATTCATGGGCTCTGTGGAGCCAATAGTTGGTGTACCTATAATCCTAGTATGGGTAGGAAATGCTCCTGCCTACCGGGATATAAGGTGGTAAATAAAGATGATTGGTCTTATGGGTGTGAACCAGATTTCAATCGGTCTTGTGATGCTCCCGGTGATGATCGAGTTGGGTTTATGCATCTCCCTCGAGTTGAAATCTATGGGATTGTTGTCTTGGAAATGCTCACCGGCAAGATGATAACAGAAAGTGTTCAATTTTCATTAGAAGGAGGAGGGGAGACACAGAAAAAGTTGCTTGTTTCATGGGTTAAGGAGAAGATGGATATTGGAGCATCTGCAAATGAAGAGAACCAGATTAGAGCAGCTGAAGATGCCACCAAGCTGGAACTTCTTGCTAAAGTGGCTCTTCAATGTTTAGAGGAAGACAAAGATGCTAGACCCACCATGAGTCAAGTTGTTGAGATGCTTCTCACCCTGCACAAAAGTGGAAACCTTATTCTCTCCGACATCGACCGATACACCGTGTGGTCCTCCAACACAGCTTCAAACTCATCGGCCCACTTGCACCTTAGAAACACCGGCAATCTTGTTCTGCTCGCTGCGCACGGCGGCGGCGTATTGTGGGAAAGCTTTGCTTCGCCGACGGACACACTTTTGGCTCAGCAAGCACTCACTAGAAACACACAGCTCATTTCTTCAAGAAGCCTCACCAACTATTCCTCCGGCTTCTACTTTTTTTACTTCGACAACGACAACACTCTTCGTATGCTCTACATCGGCCCCGAGGTTTCGAGCATTTACTGGCCTGATCCATGGCTTCTGAGTTGGCAACGAATATTCAGGATGGATGTAGATGGTAATCTCCGAGGTTACAGTCGAAAAGGTCCTGGAGATAAATGGATTGTTGCATGGGAGGCAGTTTTACAACCTTGTAAAATTCATGGCATATGCGGAGCTAATAGCTATTGCAGCTATATTCCTAGTACATGTAGGAAATGCTCATGCCTGCCGGGTTATGAAATGAACAGTAAAACCGACTGGTCTTATGGGTGTAAACCGGCTGGTTTCAATCTGTCCTGCAAGAGTAGTGCACGGGAGGAGTTTGGTTTTGTGCATCTTCCACGTATTGAGATGTATGGGTATGATTATGCCGTCTATGGCAATTACACATTAGATGAGTGCAAAAGTTTGTGCCTGGACTTGTGCAACTGTACTGCATTCCACCACAAATTTGGTGGTGGTCAGTATCAGTGTTATCCGAAGGCGCAATTACGAAATGGGTACCGGTCACCTGCTTTTGATGGGGAGTTGTATGTCAAGCTACCAATAGGCCTCCTCAATGCTACCTATAGTGATACCAACATGTGCTCGGCTAAACTTACAGCACAGCTTGACAGAACATATGAAAGAAGCAAGCCCAATGGATCGATTGAGTTTATGCTAAAATTTGCATCTGCCTTGGGAGGAATAGAGGTTATTTGCATCTTTGTTGTGTGGTTTTTTGTGACAAGAAGAAGCGGTGGAGATAAAAAAGATTCAGAATTAGAACTACTTGCTCAAGGCTACCTTCAAGCCGCCAGCGGATTCAGAAGGTTTACTTACTCAGAGTTGAAGAAGGCCACAAAAGGTTTCAAAGAAGAGATTGGCAGAGGAGGAGGAGGAGTTGTGTACAAAGGCATATTGTCTGATCAACGAGTTGCAGCAATCAAGCAACTGAATGACTGTAATCAGGGGGAAGCAGAGTTCCTTGCAAAAGTGAGCCTTATTGGTAATCTCTACCATATGAACTTGATAGAGATGTGGGGTTATTGCGTGGAAGACAAGCATAGGCTTCTGGTGTATGAGTACATGAATCACGGTGGAGGGGACACACAGAAGAAAATGATGGTCAAGTGGGTCATGGAGAAAATGGATGGAGCGTTTCCAAATGCAGGGACCGAGATTGGAGGTGAAAATGAAGATGGCAAGCTGGGAATTCTTGTTAAAGTGGCTCTTCAGTGTATAGAGGAAGACAGAAATGCTAGACCCTCTATGAGTCGAGTAGTTGAGATGCTTCTGCATCATGAATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

834

Amino Acids

93.58

Weight (kDa)

6.44

Isoelectric Point (pI)

36.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 109 - 174 3.8e-07 S-locus glycoprotein domain
B_lectin PF01453 299 - 381 2.5e-14 D-mannose binding lectin
S_locus_glycop PF00954 423 - 486 3.9e-06 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 688 - 764 4.1e-10 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 689 - 764 1.1e-09 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1732
Acc16I TGCGCA 1 cut(s) 1035
Acc36I ACCTGC 1 cut(s) 1732
Acc65I GGTACC 1 cut(s) 1713
AccB1I GGYRCC 3 cut(s) 270, 317, 1713
AccB7I CCANNNNNTGG 1 cut(s) 462
AciI CCGC 6 cut(s) 1041, 1044, 1383, 1950, 2007, 2013
AclWI GGATC 2 cut(s) 1235, 1864
AcsI RAATTY 5 cut(s) 435, 1368, 1661, 1877, 2406
AcuI CTGAAG 2 cut(s) 819, 2411
AdeI CACNNNGTG 1 cut(s) 957
AfaI GTAC 8 cut(s) 233, 371, 469, 1417, 1645, 1715, 2102, 2279
AfiI CCNNNNNNNGG 3 cut(s) 462, 485, 2363
AflIII ACRYGT 2 cut(s) 1418, 1794
AgeI ACCGGT 1 cut(s) 1716
AjnI CCWGG 4 cut(s) 385, 395, 1318, 1626
AleI CACNNNNGTG 2 cut(s) 276, 915
AloI GAACNNNNNNTCC 2 cut(s) 2159, 2191
Alw21I GWGCWC 3 cut(s) 72, 1525, 1802
Alw26I GTCTC 2 cut(s) 386, 704
Alw44I GTGCAC 1 cut(s) 1521
AlwI GGATC 2 cut(s) 1235, 1864
Ama87I CYCGRG 2 cut(s) 618, 1214
AoxI GGCC 8 cut(s) 146, 160, 185, 987, 1210, 1235, 1762, 2049
ApaLI GTGCAC 1 cut(s) 1521
ApeKI GCWGC 4 cut(s) 794, 1031, 1401, 2132
ApoI RAATTY 5 cut(s) 435, 1368, 1661, 1877, 2406
ArsI GACNNNNNNTTYG 2 cut(s) 358, 390
AsiGI ACCGGT 1 cut(s) 1716
Asp700I GAANNNNTTC 1 cut(s) 681
Asp718I GGTACC 1 cut(s) 1713
AspLEI GCGC 2 cut(s) 1036, 1699
AspS9I GGNCC 7 cut(s) 161, 225, 960, 988, 1211, 1316, 2367
AsuC2I CCSGG 3 cut(s) 510, 585, 1443
AsuHPI GGTGA 8 cut(s) 10, 82, 599, 649, 895, 1132, 1713, 2393
AvaI CYCGRG 2 cut(s) 618, 1214
AvaII GGWCC 4 cut(s) 225, 960, 1316, 2367
BaeGI GKGCMC 2 cut(s) 273, 1525
BanI GGYRCC 3 cut(s) 270, 317, 1713
BanII GRGCYC 2 cut(s) 72, 447
BbsI GAAGAC 3 cut(s) 861, 2256, 2448
Bbv12I GWGCWC 3 cut(s) 72, 1525, 1802
BbvI GCAGC 4 cut(s) 806, 1018, 1413, 2144
BccI CCATC 9 cut(s) 152, 347, 745, 1270, 1280, 1727, 2311, 2339, 2387
BceAI ACGGC 2 cut(s) 1054, 1568
BcgI CGANNNNNNTGC 2 cut(s) 599, 633
BciT130I CCWGG 4 cut(s) 387, 397, 1320, 1628
BclI TGATCA 1 cut(s) 2119
BcnI CCSGG 3 cut(s) 510, 585, 1443
BcoDI GTCTC 2 cut(s) 386, 704
BfaI CTAG 6 cut(s) 81, 480, 867, 1107, 1413, 2454
BfmI CTRYAG 1 cut(s) 1780
BfuAI ACCTGC 1 cut(s) 1732
BisI GCNGC 7 cut(s) 795, 1032, 1042, 1045, 1402, 2007, 2133
BlpI GCTNAGC 1 cut(s) 1092
BlsI GCNGC 7 cut(s) 796, 1033, 1043, 1046, 1403, 2008, 2134
Bme1390I CCNGG 7 cut(s) 387, 397, 510, 585, 1320, 1443, 1628
Bme18I GGWCC 4 cut(s) 225, 960, 1316, 2367
BmeT110I CYCGRG 2 cut(s) 618, 1214
BmgT120I GGNCC 7 cut(s) 161, 225, 960, 988, 1211, 1316, 2367
BmiI GGNNCC 7 cut(s) 163, 272, 319, 454, 1213, 1715, 2368
BmrFI CCNGG 7 cut(s) 387, 397, 510, 585, 1320, 1443, 1628
BpiI GAAGAC 3 cut(s) 861, 2256, 2448
BplI GAGNNNNNCTC 2 cut(s) 212, 244
BpmI CTGGAG 2 cut(s) 408, 1341
Bpu1102I GCTNAGC 1 cut(s) 1092
BpuEI CTTGAG 1 cut(s) 1974
BpuMI CCSGG 3 cut(s) 510, 585, 1443
Bsa29I ATCGAT 1 cut(s) 1859
BsaAI YACGTR 2 cut(s) 408, 1556
BsaBI GATNNNNATC 2 cut(s) 564, 1290
BsaI GGTCTC 1 cut(s) 386
BsaJI CCNNGG 8 cut(s) 194, 306, 321, 396, 1215, 1244, 1297, 1890
BsaWI WCCGGW 1 cut(s) 1716
BsaXI ACNNNNNCTCC 8 cut(s) 86, 116, 1136, 1166, 2079, 2082, 2109, 2112
Bsc4I CCNNNNNNNGG 3 cut(s) 462, 485, 2363
Bse118I RCCGGY 4 cut(s) 659, 1010, 1489, 1716
Bse1I ACTGG 3 cut(s) 188, 1238, 1475
Bse8I GATNNNNATC 2 cut(s) 564, 1290
BseBI CCWGG 4 cut(s) 387, 397, 1320, 1628
BseCI ATCGAT 1 cut(s) 1859
BseDI CCNNGG 8 cut(s) 194, 306, 321, 396, 1215, 1244, 1297, 1890
BseGI GGATG 6 cut(s) 281, 352, 358, 1281, 1285, 2350
BseJI GATNNNNATC 2 cut(s) 564, 1290
BseLI CCNNNNNNNGG 3 cut(s) 462, 485, 2363
BseMII CTCAG 5 cut(s) 210, 289, 1106, 1244, 2049
BseNI ACTGG 3 cut(s) 188, 1238, 1475
BseRI GAGGAG 9 cut(s) 88, 91, 717, 1544, 1757, 2097, 2100, 2103, 2106
BseSI GKGCMC 2 cut(s) 273, 1525
BseXI GCAGC 4 cut(s) 806, 1018, 1413, 2144
BseYI CCCAGC 1 cut(s) 2401
BsgI GTGCAG 2 cut(s) 347, 893
Bsh1285I CGRYCG 1 cut(s) 946
BshFI GGCC 8 cut(s) 148, 162, 187, 989, 1212, 1237, 1764, 2051
BshNI GGYRCC 3 cut(s) 270, 317, 1713
BshTI ACCGGT 1 cut(s) 1716
BshVI ATCGAT 1 cut(s) 1859
BsiEI CGRYCG 1 cut(s) 946
BsiHKAI GWGCWC 3 cut(s) 72, 1525, 1802
BsiHKCI CYCGRG 2 cut(s) 618, 1214
BslFI GGGAC 2 cut(s) 2312, 2380
BslI CCNNNNNNNGG 3 cut(s) 462, 485, 2363
BsmAI GTCTC 2 cut(s) 386, 704
BsmFI GGGAC 2 cut(s) 2312, 2380
BsmI GAATGC 1 cut(s) 1649
BsnI GGCC 8 cut(s) 148, 162, 187, 989, 1212, 1237, 1764, 2051
Bso31I GGTCTC 1 cut(s) 386
BsoBI CYCGRG 2 cut(s) 618, 1214
Bsp1286I GDGCHC 5 cut(s) 72, 273, 447, 1525, 1802
Bsp1407I TGTACA 2 cut(s) 369, 2100
Bsp143I GATC 4 cut(s) 592, 1240, 1856, 2119
Bsp1720I GCTNAGC 1 cut(s) 1092
Bsp19I CCATGG 1 cut(s) 1244
BspACI CCGC 6 cut(s) 1041, 1044, 1383, 1950, 2007, 2013
BspANI GGCC 8 cut(s) 148, 162, 187, 989, 1212, 1237, 1764, 2051
BspCNI CTCAG 5 cut(s) 211, 288, 1105, 1245, 2048
BspDI ATCGAT 1 cut(s) 1859
BspHI TCATGA 1 cut(s) 2494
BspLI GGNNCC 7 cut(s) 163, 272, 319, 454, 1213, 1715, 2368
BspMI ACCTGC 1 cut(s) 1732
BspPI GGATC 2 cut(s) 1235, 1864
BspQI GCTCTTC 2 cut(s) 843, 2430
BspT107I GGYRCC 3 cut(s) 270, 317, 1713
BspTNI GGTCTC 1 cut(s) 386
BsrFI RCCGGY 4 cut(s) 659, 1010, 1489, 1716
BsrGI TGTACA 2 cut(s) 369, 2100
BsrI ACTGG 3 cut(s) 188, 1238, 1475
BssAI RCCGGY 4 cut(s) 659, 1010, 1489, 1716
BssECI CCNNGG 8 cut(s) 194, 306, 321, 396, 1215, 1244, 1297, 1890
BssMI GATC 4 cut(s) 592, 1240, 1856, 2119
BssT1I CCWWGG 4 cut(s) 194, 321, 1244, 1890
Bst2UI CCWGG 4 cut(s) 387, 397, 1320, 1628
Bst6I CTCTTC 5 cut(s) 771, 843, 1197, 2064, 2430
BstAUI TGTACA 2 cut(s) 369, 2100
BstBAI YACGTR 2 cut(s) 408, 1556
BstC8I GCNNGC 7 cut(s) 414, 1029, 1098, 1439, 1847, 2011, 2399
BstDEI CTNAG 6 cut(s) 219, 275, 1001, 1092, 1253, 2035
BstDSI CCRYGG 1 cut(s) 1244
BstEII GGTNACC 1 cut(s) 1719
BstF5I GGATG 6 cut(s) 281, 352, 358, 1281, 1285, 2350
BstHHI GCGC 2 cut(s) 1036, 1699
BstKTI GATC 4 cut(s) 595, 1243, 1859, 2122
BstMAI GTCTC 2 cut(s) 386, 704
BstMBI GATC 4 cut(s) 592, 1240, 1856, 2119
BstMCI CGRYCG 1 cut(s) 946
BstMWI GCNNNNNNNGC 7 cut(s) 44, 803, 833, 1033, 1097, 1346, 1401
BstNI CCWGG 4 cut(s) 387, 397, 1320, 1628
BstNSI RCATGY 2 cut(s) 1422, 1798
BstPI GGTNACC 1 cut(s) 1719
BstSCI CCNGG 7 cut(s) 385, 395, 508, 583, 1318, 1441, 1626
BstSFI CTRYAG 1 cut(s) 1780
BstSLI GKGCMC 2 cut(s) 273, 1525
BstV1I GCAGC 4 cut(s) 806, 1018, 1413, 2144
BstV2I GAAGAC 3 cut(s) 861, 2256, 2448
BstXI CCANNNNNNTGG 2 cut(s) 814, 1664
Bsu15I ATCGAT 1 cut(s) 1859
BsuRI GGCC 8 cut(s) 148, 162, 187, 989, 1212, 1237, 1764, 2051
BsuTUI ATCGAT 1 cut(s) 1859
BtgI CCRYGG 1 cut(s) 1244
BtsCI GGATG 6 cut(s) 281, 352, 358, 1281, 1285, 2350
BtsIMutI CAGTG 3 cut(s) 283, 1688, 2435
BveI ACCTGC 1 cut(s) 1732
Cac8I GCNNGC 7 cut(s) 414, 1029, 1098, 1439, 1847, 2011, 2399
CciI TCATGA 1 cut(s) 2494
CfoI GCGC 2 cut(s) 1036, 1699
Cfr10I RCCGGY 4 cut(s) 659, 1010, 1489, 1716
Cfr13I GGNCC 7 cut(s) 161, 225, 960, 988, 1211, 1316, 2367
ClaI ATCGAT 1 cut(s) 1859
Csp6I GTAC 8 cut(s) 232, 370, 468, 1416, 1644, 1714, 2101, 2278
CspAI ACCGGT 1 cut(s) 1716
CspCI CAANNNNNGTGG 2 cut(s) 1648, 1683
CviQI GTAC 8 cut(s) 232, 370, 468, 1416, 1644, 1714, 2101, 2278
DdeI CTNAG 6 cut(s) 219, 275, 1001, 1092, 1253, 2035
DpnI GATC 4 cut(s) 594, 1242, 1858, 2121
DpnII GATC 4 cut(s) 592, 1240, 1856, 2119
DraIII CACNNNGTG 1 cut(s) 957
Eam1104I CTCTTC 5 cut(s) 771, 843, 1197, 2064, 2430
EarI CTCTTC 5 cut(s) 771, 843, 1197, 2064, 2430
Ecl136II GAGCTC 1 cut(s) 70
Eco130I CCWWGG 4 cut(s) 194, 321, 1244, 1890
Eco147I AGGCCT 1 cut(s) 1764
Eco24I GRGCYC 2 cut(s) 72, 447
Eco31I GGTCTC 1 cut(s) 386
Eco47I GGWCC 4 cut(s) 225, 960, 1316, 2367
Eco53kI GAGCTC 1 cut(s) 70
Eco57I CTGAAG 2 cut(s) 819, 2411
Eco88I CYCGRG 2 cut(s) 618, 1214
Eco91I GGTNACC 1 cut(s) 1719
EcoICRI GAGCTC 1 cut(s) 70
EcoO109I RGGNCCY 2 cut(s) 225, 1316
EcoO65I GGTNACC 1 cut(s) 1719
EcoRI GAATTC 1 cut(s) 2406
EcoRII CCWGG 4 cut(s) 385, 395, 1318, 1626
EcoT14I CCWWGG 4 cut(s) 194, 321, 1244, 1890
EcoT22I ATGCAT 2 cut(s) 265, 612
EcoT38I GRGCYC 2 cut(s) 72, 447
ErhI CCWWGG 4 cut(s) 194, 321, 1244, 1890
FaqI GGGAC 2 cut(s) 2312, 2380
FauNDI CATATG 3 cut(s) 1379, 1834, 2214
FbaI TGATCA 1 cut(s) 2119
Fnu4HI GCNGC 7 cut(s) 795, 1032, 1042, 1045, 1402, 2007, 2133
FokI GGATG 6 cut(s) 268, 359, 365, 1288, 1292, 2357
FriOI GRGCYC 2 cut(s) 72, 447
Fsp4HI GCNGC 7 cut(s) 795, 1032, 1042, 1045, 1402, 2007, 2133
FspBI CTAG 6 cut(s) 81, 480, 867, 1107, 1413, 2454
FspI TGCGCA 1 cut(s) 1035
GlaI GCGC 2 cut(s) 1035, 1698
GluI GCNGC 7 cut(s) 795, 1032, 1042, 1045, 1402, 2007, 2133
GsaI CCCAGC 1 cut(s) 2405
GsuI CTGGAG 2 cut(s) 408, 1341
HaeIII GGCC 8 cut(s) 148, 162, 187, 989, 1212, 1237, 1764, 2051
HhaI GCGC 2 cut(s) 1036, 1699
Hin6I GCGC 2 cut(s) 1034, 1697
HinP1I GCGC 2 cut(s) 1034, 1697
HindIII AAGCTT 2 cut(s) 8, 1060
HinfI GANTC 6 cut(s) 246, 880, 1967, 2016, 2284, 2467
HphI GGTGA 8 cut(s) 10, 82, 599, 649, 895, 1132, 1713, 2393
Hpy166II GTNNAC 6 cut(s) 468, 554, 1487, 1523, 2028, 2101
Hpy188III TCNNGA 4 cut(s) 81, 1131, 1273, 2495
Hpy8I GTNNAC 6 cut(s) 468, 554, 1487, 1523, 2028, 2101
Hpy99I CGWCG 1 cut(s) 1078
HpyAV CCTTC 6 cut(s) 334, 692, 1687, 2009, 2016, 2041
HpyCH4IV ACGT 3 cut(s) 360, 407, 1555
HpyF10VI GCNNNNNNNGC 7 cut(s) 44, 803, 833, 1033, 1097, 1346, 1401
HpyF3I CTNAG 6 cut(s) 219, 275, 1001, 1092, 1253, 2035
HpySE526I ACGT 3 cut(s) 360, 407, 1555
HspAI GCGC 2 cut(s) 1034, 1697
KpnI GGTACC 1 cut(s) 1717
Ksp22I TGATCA 1 cut(s) 2119
Kzo9I GATC 4 cut(s) 592, 1240, 1856, 2119
LguI GCTCTTC 2 cut(s) 843, 2430
LmnI GCTCC 6 cut(s) 452, 503, 586, 761, 1385, 2348
Lsp1109I GCAGC 4 cut(s) 806, 1018, 1413, 2144
MaeI CTAG 6 cut(s) 81, 480, 867, 1107, 1413, 2454
MaeII ACGT 3 cut(s) 360, 407, 1555
MaeIII GTNAC 6 cut(s) 209, 356, 403, 1301, 1719, 1936
MalI GATC 4 cut(s) 594, 1242, 1858, 2121
MboI GATC 4 cut(s) 592, 1240, 1856, 2119
MhlI GDGCHC 5 cut(s) 72, 273, 447, 1525, 1802
MlyI GAGTC 2 cut(s) 889, 2476
MmeI TCCRAC 2 cut(s) 960, 990
Mph1103I ATGCAT 2 cut(s) 265, 612
MroXI GAANNNNTTC 1 cut(s) 681
MseI TTAA 2 cut(s) 741, 2415
MslI CAYNNNNRTG 2 cut(s) 276, 915
MspA1I CMGCKG 2 cut(s) 797, 2013
MspR9I CCNGG 7 cut(s) 387, 397, 510, 585, 1320, 1443, 1628
Mva1269I GAATGC 1 cut(s) 1649
MvaI CCWGG 4 cut(s) 387, 397, 1320, 1628
MwoI GCNNNNNNNGC 7 cut(s) 44, 803, 833, 1033, 1097, 1346, 1401
NciI CCSGG 3 cut(s) 510, 585, 1443
NcoI CCATGG 1 cut(s) 1244
NdeI CATATG 3 cut(s) 1379, 1834, 2214
NdeII GATC 4 cut(s) 592, 1240, 1856, 2119
NlaIV GGNNCC 7 cut(s) 163, 272, 319, 454, 1213, 1715, 2368
NmeAIII GCCGAG 1 cut(s) 1781
NmuCI GTSAC 2 cut(s) 1719, 1936
NsbI TGCGCA 1 cut(s) 1035
NsiI ATGCAT 2 cut(s) 265, 612
NspI RCATGY 2 cut(s) 1422, 1798
OliI CACNNNNGTG 2 cut(s) 276, 915
PaeR7I CTCGAG 1 cut(s) 618
PagI TCATGA 1 cut(s) 2494
PaqCI CACCTGC 1 cut(s) 1732
PceI AGGCCT 1 cut(s) 1764
PciI ACATGT 2 cut(s) 1418, 1794
PciSI GCTCTTC 2 cut(s) 843, 2430
PcsI WCGNNNNNNNCGW 3 cut(s) 162, 255, 1044
PctI GAATGC 1 cut(s) 1649
PdmI GAANNNNTTC 1 cut(s) 681
PfeI GAWTC 4 cut(s) 246, 1967, 2016, 2284
PflMI CCANNNNNTGG 1 cut(s) 462
PfoI TCCNGGA 1 cut(s) 1318
PinAI ACCGGT 1 cut(s) 1716
PkrI GCNGC 7 cut(s) 796, 1033, 1043, 1046, 1403, 2008, 2134
PleI GAGTC 2 cut(s) 888, 2475
PpsI GAGTC 2 cut(s) 888, 2475
Ppu21I YACGTR 2 cut(s) 408, 1556
PpuMI RGGWCCY 2 cut(s) 225, 1316
PscI ACATGT 2 cut(s) 1418, 1794
Psp124BI GAGCTC 1 cut(s) 72
Psp5II RGGWCCY 2 cut(s) 225, 1316
Psp6I CCWGG 4 cut(s) 385, 395, 1318, 1626
PspEI GGTNACC 1 cut(s) 1719
PspFI CCCAGC 1 cut(s) 2401
PspGI CCWGG 4 cut(s) 385, 395, 1318, 1626
PspN4I GGNNCC 7 cut(s) 163, 272, 319, 454, 1213, 1715, 2368
PspPI GGNCC 7 cut(s) 161, 225, 960, 988, 1211, 1316, 2367
PspPPI RGGWCCY 2 cut(s) 225, 1316
PspXI VCTCGAGB 1 cut(s) 618
PvuII CAGCTG 1 cut(s) 797
RsaI GTAC 8 cut(s) 233, 371, 469, 1417, 1645, 1715, 2102, 2279
RsaNI GTAC 8 cut(s) 232, 370, 468, 1416, 1644, 1714, 2101, 2278
RseI CAYNNNNRTG 2 cut(s) 276, 915
SacI GAGCTC 1 cut(s) 72
SapI GCTCTTC 2 cut(s) 843, 2430
SaqAI TTAA 2 cut(s) 741, 2415
SatI GCNGC 7 cut(s) 795, 1032, 1042, 1045, 1402, 2007, 2133
Sau3AI GATC 4 cut(s) 592, 1240, 1856, 2119
Sau96I GGNCC 7 cut(s) 161, 225, 960, 988, 1211, 1316, 2367
SchI GAGTC 2 cut(s) 889, 2476
ScrFI CCNGG 7 cut(s) 387, 397, 510, 585, 1320, 1443, 1628
SduI GDGCHC 5 cut(s) 72, 273, 447, 1525, 1802
SfcI CTRYAG 1 cut(s) 1780
Sfr274I CTCGAG 1 cut(s) 618
SinI GGWCC 4 cut(s) 225, 960, 1316, 2367
SlaI CTCGAG 1 cut(s) 618
SmiMI CAYNNNNRTG 2 cut(s) 276, 915
SmlI CTYRAG 2 cut(s) 618, 1989
SmoI CTYRAG 2 cut(s) 618, 1989
SseBI AGGCCT 1 cut(s) 1764
SsiI CCGC 6 cut(s) 1041, 1044, 1383, 1950, 2007, 2013
SspI AATATT 1 cut(s) 1269
SspMI CTAG 6 cut(s) 81, 480, 867, 1107, 1413, 2454
SstI GAGCTC 1 cut(s) 72
StuI AGGCCT 1 cut(s) 1764
StyD4I CCNGG 7 cut(s) 385, 395, 508, 583, 1318, 1441, 1626
StyI CCWWGG 4 cut(s) 194, 321, 1244, 1890
TaiI ACGT 3 cut(s) 363, 410, 1558
TaqII GACCGA 3 cut(s) 558, 960, 2384
TatI WGTACW 5 cut(s) 369, 1415, 1643, 2100, 2277
TauI GCSGC 3 cut(s) 1044, 1047, 2009
TfiI GAWTC 4 cut(s) 246, 1967, 2016, 2284
Tru1I TTAA 2 cut(s) 741, 2415
Tru9I TTAA 2 cut(s) 741, 2415
TscAI CASTG 3 cut(s) 283, 1688, 2435
TseFI GTSAC 2 cut(s) 1719, 1936
TseI GCWGC 4 cut(s) 794, 1031, 1401, 2132
Tsp45I GTSAC 2 cut(s) 1719, 1936
TspGWI ACGGA 1 cut(s) 1091
TspRI CASTG 3 cut(s) 283, 1688, 2435
Van91I CCANNNNNTGG 1 cut(s) 462
VneI GTGCAC 1 cut(s) 1521
VpaK11BI GGWCC 4 cut(s) 225, 960, 1316, 2367
XapI RAATTY 5 cut(s) 435, 1368, 1661, 1877, 2406
XbaI TCTAGA 1 cut(s) 80
XceI RCATGY 2 cut(s) 1422, 1798
XcmI CCANNNNNNNNNTGG 2 cut(s) 1661, 1664
XhoI CTCGAG 1 cut(s) 618
XmnI GAANNNNTTC 1 cut(s) 681
XspI CTAG 6 cut(s) 81, 480, 867, 1107, 1413, 2454
Zsp2I ATGCAT 2 cut(s) 265, 612
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.