Rh6CG012100
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
N/A
Physical Location & Seq
Reverse (-)
1359481 .. 1365048
5568 bp
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UTR
Exon/CDS
Intron
Rh6CG012100.1

Sequence Viewer

Length: 279 bp
ATGGCGGGTCGTGCGATAGGGATTGACTTGGGGACAACCTACTCGTGCGTAGCAGTGTGGCAGCATGATCGAGTTGAAATCATAGTGAACGATCAAGGCAACAGAACCACTCCATCTTATGTTGCCTTCACTGATACTAAGCGATTGGTAGGAGATGCAGCACTTAACCAGATCATCAAAAACCCCACCAATACAGTCTTTGGTAGAGAAAAATGCAGGCAGATTCAGCATCTTCACGGAAGGGAAGGGCAGAAAGGGTTGTGGGACCGACCAAAATAG
Functional Annotation

Protein Analysis

92

Amino Acids

10.33

Weight (kDa)

9.44

Isoelectric Point (pI)

13.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 5 - 69 5.4e-27 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 5
AgsI TTSAA 1 cut(s) 77
ApeKI GCWGC 2 cut(s) 61, 158
AspS9I GGNCC 1 cut(s) 265
AvaII GGWCC 1 cut(s) 265
BauI CACGAG 1 cut(s) 43
BbvI GCAGC 2 cut(s) 73, 170
BccI CCATC 1 cut(s) 121
BcgI CGANNNNNNTGC 2 cut(s) 50, 84
BisI GCNGC 2 cut(s) 62, 159
BlsI GCNGC 2 cut(s) 63, 160
Bme18I GGWCC 1 cut(s) 265
BmgT120I GGNCC 1 cut(s) 265
BmiI GGNNCC 1 cut(s) 266
BmsI GCATC 2 cut(s) 145, 238
BseXI GCAGC 2 cut(s) 73, 170
BslFI GGGAC 1 cut(s) 46
BsmFI GGGAC 1 cut(s) 46
Bsp143I GATC 3 cut(s) 67, 91, 171
BspACI CCGC 1 cut(s) 5
BspLI GGNNCC 1 cut(s) 266
BssMI GATC 3 cut(s) 67, 91, 171
BssSI CACGAG 1 cut(s) 43
Bst2BI CACGAG 1 cut(s) 43
Bst4CI ACNGT 1 cut(s) 196
BstC8I GCNNGC 1 cut(s) 218
BstDEI CTNAG 1 cut(s) 138
BstKTI GATC 3 cut(s) 70, 94, 174
BstMBI GATC 3 cut(s) 67, 91, 171
BstMWI GCNNNNNNNGC 2 cut(s) 11, 226
BstV1I GCAGC 2 cut(s) 73, 170
BtsI GCAGTG 1 cut(s) 60
BtsIMutI CAGTG 2 cut(s) 60, 129
Cac8I GCNNGC 1 cut(s) 218
Cfr13I GGNCC 1 cut(s) 265
CviAII CATG 1 cut(s) 65
DdeI CTNAG 1 cut(s) 138
DpnI GATC 3 cut(s) 69, 93, 173
DpnII GATC 3 cut(s) 67, 91, 171
Eco47I GGWCC 1 cut(s) 265
FaeI CATG 1 cut(s) 68
FaiI YATR 3 cut(s) 66, 83, 120
FaqI GGGAC 1 cut(s) 46
FatI CATG 1 cut(s) 64
Fnu4HI GCNGC 2 cut(s) 62, 159
Fsp4HI GCNGC 2 cut(s) 62, 159
GluI GCNGC 2 cut(s) 62, 159
Hin1II CATG 1 cut(s) 68
HinfI GANTC 1 cut(s) 223
Hpy166II GTNNAC 1 cut(s) 88
Hpy8I GTNNAC 1 cut(s) 88
HpyAV CCTTC 3 cut(s) 136, 234, 239
HpyCH4III ACNGT 1 cut(s) 196
HpyCH4V TGCA 2 cut(s) 158, 216
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 226
HpyF3I CTNAG 1 cut(s) 138
Hsp92II CATG 1 cut(s) 68
Kzo9I GATC 3 cut(s) 67, 91, 171
LpnPI CCDG 2 cut(s) 182, 202
Lsp1109I GCAGC 2 cut(s) 73, 170
LweI GCATC 2 cut(s) 145, 238
MalI GATC 3 cut(s) 69, 93, 173
MboI GATC 3 cut(s) 67, 91, 171
MboII GAAGA 1 cut(s) 224
MseI TTAA 1 cut(s) 165
MwoI GCNNNNNNNGC 2 cut(s) 11, 226
NdeII GATC 3 cut(s) 67, 91, 171
NlaIII CATG 1 cut(s) 68
NlaIV GGNNCC 1 cut(s) 266
PfeI GAWTC 1 cut(s) 223
PkrI GCNGC 2 cut(s) 63, 160
PspN4I GGNNCC 1 cut(s) 266
PspPI GGNCC 1 cut(s) 265
SaqAI TTAA 1 cut(s) 165
SatI GCNGC 2 cut(s) 62, 159
Sau3AI GATC 3 cut(s) 67, 91, 171
Sau96I GGNCC 1 cut(s) 265
SetI ASST 1 cut(s) 41
SfaNI GCATC 2 cut(s) 145, 238
SinI GGWCC 1 cut(s) 265
SsiI CCGC 1 cut(s) 5
TaaI ACNGT 1 cut(s) 196
TaqI TCGA 1 cut(s) 70
TfiI GAWTC 1 cut(s) 223
Tru1I TTAA 1 cut(s) 165
Tru9I TTAA 1 cut(s) 165
TscAI CASTG 2 cut(s) 60, 136
TseI GCWGC 2 cut(s) 61, 158
TspGWI ACGGA 1 cut(s) 252
TspRI CASTG 2 cut(s) 60, 136
VpaK11BI GGWCC 1 cut(s) 265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.