Rh6CG487700

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
N/A
Physical Location & Seq
Reverse (-)
65560084 .. 65565154
5071 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG487700.1

Sequence Viewer

Length: 1185 bp
ATGATATTACTCCATGATGATATGTTTTTAATAGTTTTTCATTTTCTTTTCTTGTTCCAGGTTGAACATGTGCGTTCTGAGAGAAATTTGCTTGCTGAGGTTGATAGTCGGTGTATTGTGAAACTTTATTATTCATTTCAAGATTCCGATTTCTTATACCTTATCATGGAGTATTTACCTGGTGGTGACATTATGACATTATTGATGAGAGAAGATACTCTTTCTGAAGATGTTGCACGTTTTTATATGGGAGAGAGTATTCTGGCTATTCACTCAATCCATCAACACAACTATGTTCACAGGGACATAAAACCAGACAATCTGATACTGGATAAAACTGGCCATTTGAAGCTTTCAGATTTTGGCTTGTGTAAACCTCTGGATGACAAGTATTCTACATTATTGGAAAATGAGGATTTAACATCTCAAGAATGCATAGCTGAAACTGAAGGACAATCTGGCTGTGATAAGGTTCCTTGGTTGATGCCAAAAGAACAATTACAACAATGGAAACGTAATCGGCGTGCCTTGGCTTATTCAACTGTTGGAACTCTTGATTACATGGCACCCGAGGTTTTGCTGAAGAAAGGATATGGTATGGAGTGTGATTGGTGGTCACTAGGAGCAATCATGTACGAGATGCTAGTAGGCTATCCTCCATTCTGCTCTGATGATCCAAGGATCACATGCCGCAAGATTATCAATTGGAGAACATGCCTGAAGTTTCCCGACGAGCCAAAAATTTCAGACGAGGCAAGGGATTTGATCTGTCACTTGTTATGTGATGTTGAAACAAGGCTTGGGACACATGGAGTAGAAGAAATTAAGGCACATCCTTGGTTCAGAGGTATTGAGTGGGACAGGCTATATGAAATTGAAGCTGCGTATAAACCTACAGTTGTTGGAGACTTGGACACTCAGAATTTCGAGAAGTTTCCTGATCTAGAAGGTGCACCATCTGCAACACCAACAGTGGGACCGTGGCGGAAGATGTTAACCTCGAAAGATAACAATTTCATTGGATACACTTTCAAGAAATCAGATGTCCTTAAATCACTTGAAAGTTCAGGTACAGACATGAGATCAAATGGATCTTCAAAGTCCCCATCACTGATATCCTTGTTAGGTAGAATTGACTTGCAAGACAGTGTAATACCAGAGGGCGAACCAAAGCAGGAAGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000902 GO:0000904 GO:0002009 GO:0002165 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0007423 GO:0007444 GO:0007455 GO:0007469 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0008037 GO:0008038 GO:0008144 GO:0008150 GO:0008152 GO:0008544 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009913 GO:0009987 GO:0010769 GO:0010975 GO:0016043 GO:0016301 GO:0016310 GO:0016358 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022008 GO:0022416 GO:0022603 GO:0022604 GO:0023052 GO:0030030 GO:0030154 GO:0030182 GO:0030424 GO:0030425 GO:0030554 GO:0030855 GO:0031175 GO:0031344 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032990 GO:0035107 GO:0035114 GO:0035120 GO:0035214 GO:0035220 GO:0035239 GO:0035295 GO:0035315 GO:0035316 GO:0035317 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0036477 GO:0042995 GO:0043005 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044297 GO:0044424 GO:0044444 GO:0044463 GO:0044464 GO:0045595 GO:0045664 GO:0048468 GO:0048513 GO:0048563 GO:0048569 GO:0048666 GO:0048667 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048800 GO:0048812 GO:0048813 GO:0048814 GO:0048856 GO:0048858 GO:0048869 GO:0050767 GO:0050773 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051716 GO:0051960 GO:0060284 GO:0060429 GO:0060562 GO:0065007 GO:0070451 GO:0070593 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0097447 GO:0097458 GO:0099568 GO:0120025 GO:0120035 GO:0120036 GO:0120038 GO:0120039 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_C

Protein Analysis

394

Amino Acids

45.36

Weight (kDa)

4.97

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 22 - 134 1e-30 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 22 - 138 2e-15 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 53 - 132 7.4e-07 ABC1 atypical kinase-like domain
Pkinase PF00069 178 - 281 2.1e-21 Protein kinase domain
Pkinase_C PF00433 301 - 344 1.3e-07 Protein kinase C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 565
AciI CCGC 2 cut(s) 691, 985
AclWI GGATC 3 cut(s) 668, 689, 1099
AcoI YGGCCR 1 cut(s) 340
AcsI RAATTY 3 cut(s) 85, 741, 922
AcuI CTGAAG 4 cut(s) 246, 468, 602, 740
AfaI GTAC 2 cut(s) 635, 1072
AfiI CCNNNNNNNGG 2 cut(s) 166, 974
AflIII ACRYGT 1 cut(s) 67
AgsI TTSAA 9 cut(s) 65, 140, 349, 540, 791, 878, 1033, 1061, 1098
AjnI CCWGG 2 cut(s) 57, 178
AjuI GAANNNNNNNTTGG 2 cut(s) 783, 815
AluBI AGCT 3 cut(s) 352, 440, 881
AluI AGCT 3 cut(s) 352, 440, 881
Alw21I GWGCWC 1 cut(s) 955
Alw26I GTCTC 1 cut(s) 900
Alw44I GTGCAC 1 cut(s) 951
AlwI GGATC 3 cut(s) 668, 689, 1099
Ama87I CYCGRG 1 cut(s) 569
AoxI GGCC 1 cut(s) 340
ApaLI GTGCAC 1 cut(s) 951
ApeKI GCWGC 1 cut(s) 881
ApoI RAATTY 3 cut(s) 85, 741, 922
AspS9I GGNCC 1 cut(s) 977
AsuHPI GGTGA 1 cut(s) 197
AvaI CYCGRG 1 cut(s) 569
AvaII GGWCC 1 cut(s) 977
BaeGI GKGCMC 1 cut(s) 955
BalI TGGCCA 1 cut(s) 342
BanI GGYRCC 1 cut(s) 565
Bbv12I GWGCWC 1 cut(s) 955
BbvCI CCTCAGC 1 cut(s) 96
BbvI GCAGC 1 cut(s) 868
BccI CCATC 3 cut(s) 288, 964, 1114
BciT130I CCWGG 2 cut(s) 59, 180
BciVI GTATCC 1 cut(s) 1016
BcoDI GTCTC 1 cut(s) 900
BfaI CTAG 4 cut(s) 620, 644, 944, 1183
BfmI CTRYAG 1 cut(s) 894
BfuI GTATCC 1 cut(s) 1016
BisI GCNGC 2 cut(s) 691, 882
BlsI GCNGC 2 cut(s) 692, 883
Bme1390I CCNGG 2 cut(s) 59, 180
Bme18I GGWCC 1 cut(s) 977
BmeT110I CYCGRG 1 cut(s) 569
BmgT120I GGNCC 1 cut(s) 977
BmiI GGNNCC 3 cut(s) 474, 567, 978
BmrFI CCNGG 2 cut(s) 59, 180
BmsI GCATC 2 cut(s) 474, 630
Bpu10I CCTNAGC 1 cut(s) 96
BpuEI CTTGAG 1 cut(s) 411
BsaJI CCNNGG 6 cut(s) 476, 528, 570, 677, 836, 980
Bsc4I CCNNNNNNNGG 2 cut(s) 166, 974
Bse1I ACTGG 2 cut(s) 333, 343
BseBI CCWGG 2 cut(s) 59, 180
BseDI CCNNGG 6 cut(s) 476, 528, 570, 677, 836, 980
BseGI GGATG 2 cut(s) 388, 832
BseLI CCNNNNNNNGG 2 cut(s) 166, 974
BseMII CTCAG 3 cut(s) 69, 87, 932
BseNI ACTGG 2 cut(s) 333, 343
BseSI GKGCMC 1 cut(s) 955
BseXI GCAGC 1 cut(s) 868
BshFI GGCC 1 cut(s) 342
BshNI GGYRCC 1 cut(s) 565
BsiHKAI GWGCWC 1 cut(s) 955
BsiHKCI CYCGRG 1 cut(s) 569
BslFI GGGAC 5 cut(s) 317, 817, 872, 990, 1087
BslI CCNNNNNNNGG 2 cut(s) 166, 974
BsmAI GTCTC 1 cut(s) 900
BsmFI GGGAC 5 cut(s) 317, 817, 872, 990, 1087
BsmI GAATGC 1 cut(s) 437
BsnI GGCC 1 cut(s) 342
BsoBI CYCGRG 1 cut(s) 569
Bsp1286I GDGCHC 1 cut(s) 955
Bsp143I GATC 6 cut(s) 673, 681, 765, 940, 1082, 1091
BspACI CCGC 2 cut(s) 691, 985
BspANI GGCC 1 cut(s) 342
BspCNI CTCAG 3 cut(s) 70, 88, 931
BspLI GGNNCC 3 cut(s) 474, 567, 978
BspPI GGATC 3 cut(s) 668, 689, 1099
BspT107I GGYRCC 1 cut(s) 565
BsrI ACTGG 2 cut(s) 333, 343
BssECI CCNNGG 6 cut(s) 476, 528, 570, 677, 836, 980
BssMI GATC 6 cut(s) 673, 681, 765, 940, 1082, 1091
BssT1I CCWWGG 4 cut(s) 476, 528, 677, 836
Bst2UI CCWGG 2 cut(s) 59, 180
Bst4CI ACNGT 5 cut(s) 544, 898, 973, 981, 1148
BstAPI GCANNNNNTGC 1 cut(s) 959
BstC8I GCNNGC 2 cut(s) 93, 525
BstDEI CTNAG 3 cut(s) 78, 96, 918
BstDSI CCRYGG 1 cut(s) 980
BstF5I GGATG 2 cut(s) 388, 832
BstKTI GATC 6 cut(s) 676, 684, 768, 943, 1085, 1094
BstMAI GTCTC 1 cut(s) 900
BstMBI GATC 6 cut(s) 673, 681, 765, 940, 1082, 1091
BstMWI GCNNNNNNNGC 1 cut(s) 959
BstNI CCWGG 2 cut(s) 59, 180
BstNSI RCATGY 3 cut(s) 71, 690, 717
BstSCI CCNGG 2 cut(s) 57, 178
BstSFI CTRYAG 1 cut(s) 894
BstSLI GKGCMC 1 cut(s) 955
BstV1I GCAGC 1 cut(s) 868
BstX2I RGATCY 1 cut(s) 1091
BstYI RGATCY 1 cut(s) 1091
BsuI GTATCC 1 cut(s) 1016
BsuRI GGCC 1 cut(s) 342
BtgI CCRYGG 1 cut(s) 980
BtsCI GGATG 2 cut(s) 388, 832
BtsIMutI CAGTG 3 cut(s) 978, 1109, 1153
Cac8I GCNNGC 2 cut(s) 93, 525
Cfr13I GGNCC 1 cut(s) 977
CsiI ACCWGGT 1 cut(s) 178
Csp6I GTAC 2 cut(s) 634, 1071
CviAII CATG 9 cut(s) 14, 68, 166, 562, 631, 687, 714, 809, 1078
CviQI GTAC 2 cut(s) 634, 1071
DdeI CTNAG 3 cut(s) 78, 96, 918
DpnI GATC 6 cut(s) 675, 683, 767, 942, 1084, 1093
DpnII GATC 6 cut(s) 673, 681, 765, 940, 1082, 1091
EaeI YGGCCR 1 cut(s) 340
EciI GGCGGA 1 cut(s) 1000
Eco130I CCWWGG 4 cut(s) 476, 528, 677, 836
Eco32I GATATC 1 cut(s) 1116
Eco47I GGWCC 1 cut(s) 977
Eco57I CTGAAG 4 cut(s) 246, 468, 602, 740
Eco88I CYCGRG 1 cut(s) 569
EcoRII CCWGG 2 cut(s) 57, 178
EcoRV GATATC 1 cut(s) 1116
EcoT14I CCWWGG 4 cut(s) 476, 528, 677, 836
EcoT22I ATGCAT 1 cut(s) 437
ErhI CCWWGG 4 cut(s) 476, 528, 677, 836
FaeI CATG 9 cut(s) 17, 71, 169, 565, 634, 690, 717, 812, 1081
FalI AAGNNNNNCTT 2 cut(s) 204, 236
FaqI GGGAC 5 cut(s) 317, 817, 872, 990, 1087
FatI CATG 9 cut(s) 13, 67, 165, 561, 630, 686, 713, 808, 1077
Fnu4HI GCNGC 2 cut(s) 691, 882
FokI GGATG 2 cut(s) 395, 819
Fsp4HI GCNGC 2 cut(s) 691, 882
FspBI CTAG 4 cut(s) 620, 644, 944, 1183
GluI GCNGC 2 cut(s) 691, 882
HaeIII GGCC 1 cut(s) 342
Hin1II CATG 9 cut(s) 17, 71, 169, 565, 634, 690, 717, 812, 1081
HincII GTYRAC 1 cut(s) 996
HindII GTYRAC 1 cut(s) 996
HindIII AAGCTT 1 cut(s) 350
HinfI GANTC 1 cut(s) 143
HpaI GTTAAC 1 cut(s) 996
HphI GGTGA 1 cut(s) 197
Hpy166II GTNNAC 4 cut(s) 298, 374, 953, 996
Hpy188III TCNNGA 9 cut(s) 140, 380, 428, 554, 728, 928, 938, 944, 1033
Hpy8I GTNNAC 4 cut(s) 298, 374, 953, 996
Hpy99I CGWCG 1 cut(s) 734
HpyAV CCTTC 2 cut(s) 443, 941
HpyCH4III ACNGT 5 cut(s) 544, 898, 973, 981, 1148
HpyCH4IV ACGT 2 cut(s) 238, 514
HpyCH4V TGCA 5 cut(s) 236, 435, 953, 962, 1141
HpyF10VI GCNNNNNNNGC 1 cut(s) 959
HpyF3I CTNAG 3 cut(s) 78, 96, 918
HpySE526I ACGT 2 cut(s) 238, 514
Hsp92II CATG 9 cut(s) 17, 71, 169, 565, 634, 690, 717, 812, 1081
KspAI GTTAAC 1 cut(s) 996
Kzo9I GATC 6 cut(s) 673, 681, 765, 940, 1082, 1091
LmnI GCTCC 1 cut(s) 623
Lsp1109I GCAGC 1 cut(s) 868
LweI GCATC 2 cut(s) 474, 630
MabI ACCWGGT 1 cut(s) 178
MaeI CTAG 4 cut(s) 620, 644, 944, 1183
MaeII ACGT 2 cut(s) 238, 514
MaeIII GTNAC 3 cut(s) 185, 615, 770
MalI GATC 6 cut(s) 675, 683, 767, 942, 1084, 1093
MboI GATC 6 cut(s) 673, 681, 765, 940, 1082, 1091
MboII GAAGA 6 cut(s) 224, 239, 595, 830, 1000, 1086
MfeI CAATTG 1 cut(s) 703
MflI RGATCY 1 cut(s) 1091
MhlI GDGCHC 1 cut(s) 955
MlsI TGGCCA 1 cut(s) 342
MluCI AATT 9 cut(s) 85, 497, 703, 741, 822, 873, 922, 1012, 1131
MluNI TGGCCA 1 cut(s) 342
MmeI TCCRAC 2 cut(s) 526, 883
MnlI CCTC 9 cut(s) 91, 387, 406, 565, 666, 745, 839, 1009, 1153
Mox20I TGGCCA 1 cut(s) 342
Mph1103I ATGCAT 1 cut(s) 437
MscI TGGCCA 1 cut(s) 342
MseI TTAA 5 cut(s) 29, 419, 825, 995, 1050
MslI CAYNNNNRTG 1 cut(s) 291
Msp20I TGGCCA 1 cut(s) 342
MspR9I CCNGG 2 cut(s) 59, 180
MunI CAATTG 1 cut(s) 703
Mva1269I GAATGC 1 cut(s) 437
MvaI CCWGG 2 cut(s) 59, 180
MwoI GCNNNNNNNGC 1 cut(s) 959
NdeII GATC 6 cut(s) 673, 681, 765, 940, 1082, 1091
NlaIII CATG 9 cut(s) 17, 71, 169, 565, 634, 690, 717, 812, 1081
NlaIV GGNNCC 3 cut(s) 474, 567, 978
NmuCI GTSAC 3 cut(s) 185, 615, 770
NsiI ATGCAT 1 cut(s) 437
NspI RCATGY 3 cut(s) 71, 690, 717
PciI ACATGT 1 cut(s) 67
PcsI WCGNNNNNNNCGW 1 cut(s) 520
PctI GAATGC 1 cut(s) 437
PfeI GAWTC 1 cut(s) 143
PkrI GCNGC 2 cut(s) 692, 883
PscI ACATGT 1 cut(s) 67
Psp6I CCWGG 2 cut(s) 57, 178
PspGI CCWGG 2 cut(s) 57, 178
PspN4I GGNNCC 3 cut(s) 474, 567, 978
PspPI GGNCC 1 cut(s) 977
PsuI RGATCY 1 cut(s) 1091
RsaI GTAC 2 cut(s) 635, 1072
RsaNI GTAC 2 cut(s) 634, 1071
RseI CAYNNNNRTG 1 cut(s) 291
SaqAI TTAA 5 cut(s) 29, 419, 825, 995, 1050
SatI GCNGC 2 cut(s) 691, 882
Sau3AI GATC 6 cut(s) 673, 681, 765, 940, 1082, 1091
Sau96I GGNCC 1 cut(s) 977
ScrFI CCNGG 2 cut(s) 59, 180
SduI GDGCHC 1 cut(s) 955
SexAI ACCWGGT 1 cut(s) 178
SfaNI GCATC 2 cut(s) 474, 630
SfcI CTRYAG 1 cut(s) 894
SinI GGWCC 1 cut(s) 977
SmiMI CAYNNNNRTG 1 cut(s) 291
SmlI CTYRAG 1 cut(s) 426
SmoI CTYRAG 1 cut(s) 426
Sse9I AATT 9 cut(s) 85, 497, 703, 741, 822, 873, 922, 1012, 1131
SsiI CCGC 2 cut(s) 691, 985
SspMI CTAG 4 cut(s) 620, 644, 944, 1183
StyD4I CCNGG 2 cut(s) 57, 178
StyI CCWWGG 4 cut(s) 476, 528, 677, 836
TaaI ACNGT 5 cut(s) 544, 898, 973, 981, 1148
TaiI ACGT 2 cut(s) 241, 517
TaqI TCGA 2 cut(s) 927, 1001
TasI AATT 9 cut(s) 85, 497, 703, 741, 822, 873, 922, 1012, 1131
TauI GCSGC 1 cut(s) 693
TfiI GAWTC 1 cut(s) 143
Tru1I TTAA 5 cut(s) 29, 419, 825, 995, 1050
Tru9I TTAA 5 cut(s) 29, 419, 825, 995, 1050
TscAI CASTG 3 cut(s) 978, 1116, 1153
TseFI GTSAC 3 cut(s) 185, 615, 770
TseI GCWGC 1 cut(s) 881
Tsp45I GTSAC 3 cut(s) 185, 615, 770
TspDTI ATGAA 4 cut(s) 29, 123, 885, 1006
TspRI CASTG 3 cut(s) 978, 1116, 1153
VneI GTGCAC 1 cut(s) 951
VpaK11BI GGWCC 1 cut(s) 977
XapI RAATTY 3 cut(s) 85, 741, 922
XbaI TCTAGA 1 cut(s) 943
XceI RCATGY 3 cut(s) 71, 690, 717
XspI CTAG 4 cut(s) 620, 644, 944, 1183
Zsp2I ATGCAT 1 cut(s) 437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.