Rh6DG392200

Domain of unknown function (DUF3403)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
N/A
Physical Location & Seq
Reverse (-)
58439965 .. 58449275
9311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG392200.1

Sequence Viewer

Length: 2835 bp
ATGTTTCTGTTTCTAACAAGTATTGATGTTACATACAGCATCTTGACAATTTCTTTGAGCATATCTGACTCCAAAACCATTTTGATGTATAGTTCTTCCAATTCCAATAACGTTCTTCATTTCAGACCCTCAACATTTCCATTAACAGCGATATTTAATTATTTGGATCATACGGGTACTATGCTATGGCAAAGTTTTGATAGTCCTACTGATACTTATCTTCCTGGGATGAAACTTGGTTGGTCTCAGCTTAACAGTAACCAGCCAATCTATCTCGTTTTTGTTTCTTGGGTGAACCCCCAAAACCCTGCTCCTGGCAACTTTACCTTAACCATGAACAGGATCAACTTTACAAAGCTTCAGGTTTGGCAAGGAAATAATGATCAAATGAATGTTGGATTTTGGGATGGACATAAGGTGCATTTTATCTTTAATAACTCAACAAGTGGAAATGACTACAATTTTAGTTACTACTCCAATGCAGATGAAGCCTACTTTATTTTTAGTGGCAATAAGAATTACGACCTCATGTGGTTTGTGATGGCTTCCACGGGAAAGCTAGATCAGTATTATATGGTGGATGGGAAGATTTCTTCTGTAATTAATGCTGTGTGTGATCCAAGTGGGAGGTGCTTGAATTCCCTACCGTCTATGTGTAAGAATGGTGATAGTTTTTCACAGGTGAAGGGTTCACTGCCTTCTACTTTTAATAGTGGTTCTATAAATATGGGGACTACAGATTGTGAATCTTGGTGCCGGAGCAATTGTTCTTGTACATCATTTGCTTCACCTCAGAATGATAAAGTATGCCAACTTTATTATGGGAGTAGAAATGATTTATTGAAGATCATAGAGAAGGGGACAGGAATTATATACATCCGCGGTGGTGCTCCAAGTGATGGTAAGAACTGGAAACTCTGGTTGGCTACCGTCCTTCCTTTGGCGTCCCTCTTGGTTCTTATTACAACCTCCTTATCCTGCTATCTTCGTCGGAGAAGAAGACGTAAAGAGGATCCAGTAACCAGACGGGAAGGCATTATCAATTTGGATCTGGTGAATTTATTCCAAATGGGAACTAATGAGTCACAACTTCGTCATGATGAAGTTAGAGAGATCATAAGTGCCAAGAAGAACATTGCCTTCTTTGAGGCAGATCACTCTCTGAACTTACTTGGCAAAGCTTGGAATCTGTGGAAAGAAGGCAATAGCATGGAGTTGATGGATCCAACACTCGGTGCTGGTAGGATTTTTGAGCTTGGCTTCTTCAGTGATGACTTTTCAGGCAATTATTATATTGGCATTTGGTTCAAAGCCGATAAGAACAAGGTTGTCTGGGTTGGTAACCGCGAAATTCCCATATCAGATTCCTCAGGTATTCTTCAAATACGATCTGGGAATCTGGTTTTCATGGACAGACGTCAAGTTCCTTGGCTACTCAATTCTGAAAATGTTGCCACGGCCATAAACACAACTGCAACACTTCTTGATTCAGGAAATTTTGTCCTTAAAGAAGAATATACAGGTACTGTTCTATGGCAAAGTTTTGATAATCCAACTGATACTTATCTTCCTGGGATGAAACTTGGTTGGTCGGCACTAAACACTAACCAACCAAGCTTTCACCTTTTTGTTTCTTGGGTAAGCCCCCAAAGCCCTACTCGTGGCCTTTTCACCTTAACCATGGATAGGATCAACTTTACAAAGATTCAGGTTTGGCGAGGAGATAAAGTTCGAATGGATATTGGGTTTTGGGATGGACATAACCTGCGGTTTATTTTTGACAACTCAACAAGTGGAAATGACTACAATTTTAGTCACCATTCCACTGCAGATGAAGCCTACTTTAATTTTAGTGGCAATAAGAATTATGACATTGTGTGGTTTGTGATGGCTTCCACGGGAAAACTAGATCAGTATTTTATGTTGGATGGGAAGATTTCTTCCGTGAGTCATGCCCTGTGTGAAAATTCAACTGGGAGGTGCTTGACTTCCCTACCATCTATGTGTGAGGATGGTGAAAGCTTTTCACAGGTTAAGGGATCACTGCCATCTATGTTTAACATTGGTGCCATTAATACGGGGCCTAGTGGTTGTGAAACTTTGTGCGAGAGCAATTGTTCTTGCACTGCATTTGCTTCACTTCAGAATGATCAAGAATGCCAACTTTATTATGGGAGTAAGCAGGATTTATTGAAGACCATAGTAAAAGGGCCAGGGATTATTTACATCCGCGGTACTGCTGCTACAAATGGTGGTAAGAAGTGGAAACTCGGGTTAGCTCTCACAGTTTCTTTGGCTACCCTCTTGGTTCTTATCCCTTTTTCCTTATGCTGCTATCTGCGTTGGAGAAAGGGACACAAAGAAGACTCAGTAATAGAAGGCATTATCAATTTGGACCAAGAGAGTTTATTCCAAAGGGCGACTAATGTGTCACCAGTTCAGCAGAATGCAGTTAGAGAGATTATTACTGGCAAGAAGAATATTGCCTTCTTTGAAGTTGATCATTCTCTGAACTTACTGGGCAAAGCTTGGACTTTGTGGAAAGAAGGTAATGGCATGGAGTTGATGGATTCGACACTGCGTGCTTCTTGTTCGAGCAGTGAAGTTATGAGATACATACAGATGGGTCTTCTGTGCGTGCAAGAAAGATCTATTGATCGACCAAACATGTCTGATGTAGTTTCTCTGCTAAGCAATCAGTCATTTGCTCTGCCTTTTCCTAAAGAACCTGCATTTTTGTGTCAGCAAATTTCGACTGATGCAGATTCATCTTCAAGTAGGCAAAGACATTACTCTCAGAATGATCTAACCATTTCACAAGTGCATGGCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

944

Amino Acids

106.02

Weight (kDa)

6.45

Isoelectric Point (pI)

39.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 55 - 87 6.4e-08 D-mannose binding lectin
B_lectin PF01453 443 - 536 9.6e-27 D-mannose binding lectin
DUF3403 PF11883 903 - 944 3.6e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2428
AatII GACGTC 1 cut(s) 1420
Acc36I ACCTGC 3 cut(s) 1773, 2737, 2820
AccB1I GGYRCC 2 cut(s) 753, 2066
AccB7I CCANNNNNTGG 1 cut(s) 899
AccII CGCG 3 cut(s) 882, 1347, 2232
AciI CCGC 6 cut(s) 880, 882, 1345, 1768, 2230, 2232
AclI AACGTT 1 cut(s) 111
AcoI YGGCCR 1 cut(s) 1458
AcsI RAATTY 6 cut(s) 637, 1057, 1350, 1495, 1966, 2748
AcuI CTGAAG 3 cut(s) 344, 1249, 2126
AcyI GRCGYC 2 cut(s) 944, 1417
AdeI CACNNNGTG 2 cut(s) 1235, 2582
AfaI GTAC 4 cut(s) 178, 775, 1525, 2236
AfiI CCNNNNNNNGG 7 cut(s) 314, 339, 899, 940, 1232, 1661, 1686
AflIII ACRYGT 1 cut(s) 2667
AgsI TTSAA 8 cut(s) 637, 844, 1309, 1382, 1971, 2194, 2495, 2775
AjnI CCWGG 4 cut(s) 223, 313, 1570, 2212
AjuI GAANNNNNNNTTGG 4 cut(s) 905, 937, 1602, 1634
AloI GAACNNNNNNTCC 4 cut(s) 751, 783, 1713, 1745
AluBI AGCT 9 cut(s) 250, 358, 559, 1181, 1255, 1617, 2022, 2279, 2528
AluI AGCT 9 cut(s) 250, 358, 559, 1181, 1255, 1617, 2022, 2279, 2528
Alw21I GWGCWC 1 cut(s) 892
Alw26I GTCTC 1 cut(s) 249
AlwNI CAGNNNCTG 1 cut(s) 1526
Ama87I CYCGRG 1 cut(s) 2270
AoxI GGCC 4 cut(s) 1458, 1663, 2081, 2210
ApeKI GCWGC 2 cut(s) 2240, 2331
ApoI RAATTY 6 cut(s) 637, 1057, 1350, 1495, 1966, 2748
ArsI GACNNNNNNTTYG 2 cut(s) 37, 69
AseI ATTAAT 2 cut(s) 603, 2073
Asp700I GAANNNNTTC 1 cut(s) 1061
AspS9I GGNCC 3 cut(s) 2081, 2210, 2395
AsuII TTCGAA 1 cut(s) 1732
AvaI CYCGRG 1 cut(s) 2270
AvaII GGWCC 1 cut(s) 2395
AxyI CCTNAGG 1 cut(s) 1369
BamHI GGATCC 2 cut(s) 1012, 1222
BanI GGYRCC 2 cut(s) 753, 2066
BauI CACGAG 1 cut(s) 1659
BbsI GAAGAC 4 cut(s) 1006, 2201, 2370, 2621
Bbv12I GWGCWC 1 cut(s) 892
BbvI GCAGC 2 cut(s) 2227, 2318
BceAI ACGGC 1 cut(s) 1473
BciT130I CCWGG 4 cut(s) 225, 315, 1572, 2214
BclI TGATCA 3 cut(s) 382, 2149, 2500
BcoDI GTCTC 1 cut(s) 249
BfaI CTAG 3 cut(s) 560, 1907, 2085
BfmI CTRYAG 2 cut(s) 735, 1827
BfuAI ACCTGC 3 cut(s) 1773, 2737, 2820
BglII AGATCT 1 cut(s) 2648
BisI GCNGC 2 cut(s) 2241, 2332
BlpI GCTNAGC 1 cut(s) 2690
BlsI GCNGC 2 cut(s) 2242, 2333
Bme1390I CCNGG 4 cut(s) 225, 315, 1572, 2214
Bme18I GGWCC 1 cut(s) 2395
BmeT110I CYCGRG 1 cut(s) 2270
BmgT120I GGNCC 3 cut(s) 2081, 2210, 2395
BmiI GGNNCC 5 cut(s) 755, 1014, 1224, 2068, 2082
BmrFI CCNGG 4 cut(s) 225, 315, 1572, 2214
BmrI ACTGGG 2 cut(s) 1983, 2528
BmsI GCATC 2 cut(s) 48, 2749
BmuI ACTGGG 2 cut(s) 1983, 2528
BoxI GACNNNNGTC 1 cut(s) 1416
BpiI GAAGAC 4 cut(s) 1006, 2201, 2370, 2621
Bpu1102I GCTNAGC 1 cut(s) 2690
Bpu14I TTCGAA 1 cut(s) 1732
BsaBI GATNNNNATC 2 cut(s) 216, 1563
BsaHI GRCGYC 2 cut(s) 944, 1417
BsaI GGTCTC 1 cut(s) 249
BsaXI ACNNNNNCTCC 4 cut(s) 751, 781, 1713, 1743
Bsc4I CCNNNNNNNGG 7 cut(s) 314, 339, 899, 940, 1232, 1661, 1686
Bse1I ACTGG 6 cut(s) 914, 1016, 1978, 2435, 2473, 2523
Bse21I CCTNAGG 1 cut(s) 1369
Bse3DI GCAATG 1 cut(s) 1134
Bse8I GATNNNNATC 2 cut(s) 216, 1563
BseBI CCWGG 4 cut(s) 225, 315, 1572, 2214
BseGI GGATG 9 cut(s) 234, 412, 586, 876, 1581, 1759, 1933, 2017, 2226
BseJI GATNNNNATC 2 cut(s) 216, 1563
BseLI CCNNNNNNNGG 7 cut(s) 314, 339, 899, 940, 1232, 1661, 1686
BseMI GCAATG 1 cut(s) 1134
BseMII CTCAG 5 cut(s) 260, 806, 1383, 2382, 2810
BseNI ACTGG 6 cut(s) 914, 1016, 1978, 2435, 2473, 2523
BseRI GAGGAG 1 cut(s) 1734
BseXI GCAGC 2 cut(s) 2227, 2318
Bsh1236I CGCG 3 cut(s) 882, 1347, 2232
BshFI GGCC 4 cut(s) 1460, 1665, 2083, 2212
BshNI GGYRCC 2 cut(s) 753, 2066
BsiHKAI GWGCWC 1 cut(s) 892
BsiHKCI CYCGRG 1 cut(s) 2270
BsiSI CCGG 1 cut(s) 757
BslFI GGGAC 4 cut(s) 745, 874, 931, 2367
BslI CCNNNNNNNGG 7 cut(s) 314, 339, 899, 940, 1232, 1661, 1686
BsmAI GTCTC 1 cut(s) 249
BsmFI GGGAC 4 cut(s) 745, 874, 931, 2367
BsmI GAATGC 2 cut(s) 2162, 2452
BsnI GGCC 4 cut(s) 1460, 1665, 2083, 2212
Bso31I GGTCTC 1 cut(s) 249
BsoBI CYCGRG 1 cut(s) 2270
Bsp119I TTCGAA 1 cut(s) 1732
Bsp1286I GDGCHC 1 cut(s) 892
Bsp1407I TGTACA 1 cut(s) 773
Bsp1720I GCTNAGC 1 cut(s) 2690
Bsp19I CCATGG 1 cut(s) 1680
BspACI CCGC 6 cut(s) 880, 882, 1345, 1768, 2230, 2232
BspANI GGCC 4 cut(s) 1460, 1665, 2083, 2212
BspCNI CTCAG 5 cut(s) 259, 805, 1382, 2381, 2809
BspFNI CGCG 3 cut(s) 882, 1347, 2232
BspHI TCATGA 1 cut(s) 1096
BspLI GGNNCC 5 cut(s) 755, 1014, 1224, 2068, 2082
BspMAI CTGCAG 1 cut(s) 1831
BspMI ACCTGC 3 cut(s) 1773, 2737, 2820
BspT104I TTCGAA 1 cut(s) 1732
BspT107I GGYRCC 2 cut(s) 753, 2066
BspTNI GGTCTC 1 cut(s) 249
BsrDI GCAATG 1 cut(s) 1134
BsrGI TGTACA 1 cut(s) 773
BsrI ACTGG 6 cut(s) 914, 1016, 1978, 2435, 2473, 2523
BssNI GRCGYC 2 cut(s) 944, 1417
BssSI CACGAG 1 cut(s) 1659
BssT1I CCWWGG 2 cut(s) 1427, 1680
Bst2BI CACGAG 1 cut(s) 1659
Bst2UI CCWGG 4 cut(s) 225, 315, 1572, 2214
Bst4CI ACNGT 5 cut(s) 257, 648, 931, 1528, 2287
BstACI GRCGYC 2 cut(s) 944, 1417
BstAUI TGTACA 1 cut(s) 773
BstBI TTCGAA 1 cut(s) 1732
BstC8I GCNNGC 2 cut(s) 2583, 2639
BstDEI CTNAG 6 cut(s) 246, 792, 1369, 2368, 2690, 2796
BstDSI CCRYGG 6 cut(s) 549, 880, 1455, 1680, 1896, 2230
BstEII GGTNACC 1 cut(s) 1340
BstF5I GGATG 9 cut(s) 234, 412, 586, 876, 1581, 1759, 1933, 2017, 2226
BstFNI CGCG 3 cut(s) 882, 1347, 2232
BstMAI GTCTC 1 cut(s) 249
BstMWI GCNNNNNNNGC 3 cut(s) 488, 1650, 1835
BstNI CCWGG 4 cut(s) 225, 315, 1572, 2214
BstNSI RCATGY 1 cut(s) 2671
BstPAI GACNNNNGTC 1 cut(s) 1416
BstPI GGTNACC 1 cut(s) 1340
BstSCI CCNGG 4 cut(s) 223, 313, 1570, 2212
BstSFI CTRYAG 2 cut(s) 735, 1827
BstUI CGCG 3 cut(s) 882, 1347, 2232
BstV1I GCAGC 2 cut(s) 2227, 2318
BstV2I GAAGAC 4 cut(s) 1006, 2201, 2370, 2621
BstX2I RGATCY 4 cut(s) 1012, 1048, 1222, 2648
BstYI RGATCY 4 cut(s) 1012, 1048, 1222, 2648
Bsu36I CCTNAGG 1 cut(s) 1369
BsuRI GGCC 4 cut(s) 1460, 1665, 2083, 2212
BtgI CCRYGG 6 cut(s) 549, 880, 1455, 1680, 1896, 2230
BtsCI GGATG 9 cut(s) 234, 412, 586, 876, 1581, 1759, 1933, 2017, 2226
BtsI GCAGTG 6 cut(s) 692, 1824, 2042, 2124, 2576, 2605
BtsIMutI CAGTG 7 cut(s) 692, 1273, 1824, 2042, 2124, 2576, 2605
BveI ACCTGC 3 cut(s) 1773, 2737, 2820
Cac8I GCNNGC 2 cut(s) 2583, 2639
CaiI CAGNNNCTG 1 cut(s) 1526
CciI TCATGA 1 cut(s) 1096
Cfr13I GGNCC 3 cut(s) 2081, 2210, 2395
Cfr42I CCGCGG 2 cut(s) 883, 2233
CseI GACGC 1 cut(s) 933
Csp6I GTAC 4 cut(s) 177, 774, 1524, 2235
CviQI GTAC 4 cut(s) 177, 774, 1524, 2235
DdeI CTNAG 6 cut(s) 246, 792, 1369, 2368, 2690, 2796
DraIII CACNNNGTG 2 cut(s) 1235, 2582
DrdI GACNNNNNNGTC 1 cut(s) 2428
DseDI GACNNNNNNGTC 1 cut(s) 2428
EaeI YGGCCR 1 cut(s) 1458
Eco130I CCWWGG 2 cut(s) 1427, 1680
Eco31I GGTCTC 1 cut(s) 249
Eco47I GGWCC 1 cut(s) 2395
Eco57I CTGAAG 3 cut(s) 344, 1249, 2126
Eco81I CCTNAGG 1 cut(s) 1369
Eco88I CYCGRG 1 cut(s) 2270
Eco91I GGTNACC 1 cut(s) 1340
EcoO109I RGGNCCY 1 cut(s) 2081
EcoO65I GGTNACC 1 cut(s) 1340
EcoRI GAATTC 1 cut(s) 637
EcoRII CCWGG 4 cut(s) 223, 313, 1570, 2212
EcoT14I CCWWGG 2 cut(s) 1427, 1680
ErhI CCWWGG 2 cut(s) 1427, 1680
FaqI GGGAC 4 cut(s) 745, 874, 931, 2367
FbaI TGATCA 3 cut(s) 382, 2149, 2500
Fnu4HI GCNGC 2 cut(s) 2241, 2332
FokI GGATG 9 cut(s) 241, 419, 593, 863, 1588, 1766, 1940, 2024, 2213
Fsp4HI GCNGC 2 cut(s) 2241, 2332
FspBI CTAG 3 cut(s) 560, 1907, 2085
GluI GCNGC 2 cut(s) 2241, 2332
HaeIII GGCC 4 cut(s) 1460, 1665, 2083, 2212
HapII CCGG 1 cut(s) 757
HgaI GACGC 1 cut(s) 933
Hin1I GRCGYC 2 cut(s) 944, 1417
HindIII AAGCTT 5 cut(s) 356, 1179, 1615, 2020, 2526
HpaII CCGG 1 cut(s) 757
Hpy166II GTNNAC 2 cut(s) 295, 692
Hpy188III TCNNGA 5 cut(s) 43, 1097, 1484, 1491, 2153
Hpy8I GTNNAC 2 cut(s) 295, 692
Hpy99I CGWCG 1 cut(s) 993
HpyCH4III ACNGT 5 cut(s) 257, 648, 931, 1528, 2287
HpyCH4IV ACGT 3 cut(s) 111, 1003, 1417
HpyF10VI GCNNNNNNNGC 3 cut(s) 488, 1650, 1835
HpyF3I CTNAG 6 cut(s) 246, 792, 1369, 2368, 2690, 2796
HpySE526I ACGT 3 cut(s) 111, 1003, 1417
Hsp92I GRCGYC 2 cut(s) 944, 1417
Ksp22I TGATCA 3 cut(s) 382, 2149, 2500
KspI CCGCGG 2 cut(s) 883, 2233
LmnI GCTCC 3 cut(s) 316, 759, 895
Lsp1109I GCAGC 2 cut(s) 2227, 2318
LweI GCATC 2 cut(s) 48, 2749
MaeI CTAG 3 cut(s) 560, 1907, 2085
MaeII ACGT 3 cut(s) 111, 1003, 1417
MaeIII GTNAC 8 cut(s) 28, 257, 467, 1018, 1083, 1340, 1814, 2430
MfeI CAATTG 2 cut(s) 763, 2113
MflI RGATCY 4 cut(s) 1012, 1048, 1222, 2648
MhlI GDGCHC 1 cut(s) 892
MlyI GAGTC 4 cut(s) 62, 1091, 1957, 2360
MmeI TCCRAC 6 cut(s) 376, 971, 1250, 1577, 1905, 2324
MroXI GAANNNNTTC 1 cut(s) 1061
MslI CAYNNNNRTG 4 cut(s) 83, 2002, 2621, 2737
MspA1I CMGCKG 2 cut(s) 882, 2232
MspI CCGG 1 cut(s) 757
MspR9I CCNGG 4 cut(s) 225, 315, 1572, 2214
MunI CAATTG 2 cut(s) 763, 2113
Mva1269I GAATGC 2 cut(s) 2162, 2452
MvaI CCWGG 4 cut(s) 225, 315, 1572, 2214
MvnI CGCG 3 cut(s) 882, 1347, 2232
MwoI GCNNNNNNNGC 3 cut(s) 488, 1650, 1835
NcoI CCATGG 1 cut(s) 1680
NlaIV GGNNCC 5 cut(s) 755, 1014, 1224, 2068, 2082
NmuCI GTSAC 3 cut(s) 1083, 1814, 2430
NspI RCATGY 1 cut(s) 2671
NspV TTCGAA 1 cut(s) 1732
PagI TCATGA 1 cut(s) 1096
PciI ACATGT 1 cut(s) 2667
PctI GAATGC 2 cut(s) 2162, 2452
PdmI GAANNNNTTC 1 cut(s) 1061
PfeI GAWTC 8 cut(s) 746, 1186, 1364, 1396, 1487, 1705, 2570, 2765
PflMI CCANNNNNTGG 1 cut(s) 899
PkrI GCNGC 2 cut(s) 2242, 2333
PleI GAGTC 4 cut(s) 62, 1090, 1956, 2360
PpsI GAGTC 4 cut(s) 62, 1090, 1956, 2360
PscI ACATGT 1 cut(s) 2667
PshAI GACNNNNGTC 1 cut(s) 1416
PshBI ATTAAT 2 cut(s) 603, 2073
Psp1406I AACGTT 1 cut(s) 111
Psp6I CCWGG 4 cut(s) 223, 313, 1570, 2212
PspEI GGTNACC 1 cut(s) 1340
PspGI CCWGG 4 cut(s) 223, 313, 1570, 2212
PspN4I GGNNCC 5 cut(s) 755, 1014, 1224, 2068, 2082
PspPI GGNCC 3 cut(s) 2081, 2210, 2395
PstI CTGCAG 1 cut(s) 1831
PstNI CAGNNNCTG 1 cut(s) 1526
PsuI RGATCY 4 cut(s) 1012, 1048, 1222, 2648
RsaI GTAC 4 cut(s) 178, 775, 1525, 2236
RsaNI GTAC 4 cut(s) 177, 774, 1524, 2235
RseI CAYNNNNRTG 4 cut(s) 83, 2002, 2621, 2737
SacII CCGCGG 2 cut(s) 883, 2233
SatI GCNGC 2 cut(s) 2241, 2332
Sau96I GGNCC 3 cut(s) 2081, 2210, 2395
SchI GAGTC 4 cut(s) 62, 1091, 1957, 2360
ScrFI CCNGG 4 cut(s) 225, 315, 1572, 2214
SduI GDGCHC 1 cut(s) 892
SfaNI GCATC 2 cut(s) 48, 2749
SfcI CTRYAG 2 cut(s) 735, 1827
Sfr303I CCGCGG 2 cut(s) 883, 2233
SfuI TTCGAA 1 cut(s) 1732
SgrBI CCGCGG 2 cut(s) 883, 2233
SinI GGWCC 1 cut(s) 2395
SmiMI CAYNNNNRTG 4 cut(s) 83, 2002, 2621, 2737
SsiI CCGC 6 cut(s) 880, 882, 1345, 1768, 2230, 2232
SspI AATATT 1 cut(s) 2482
SspMI CTAG 3 cut(s) 560, 1907, 2085
StyD4I CCNGG 4 cut(s) 223, 313, 1570, 2212
StyI CCWWGG 2 cut(s) 1427, 1680
TaaI ACNGT 5 cut(s) 257, 648, 931, 1528, 2287
TaiI ACGT 3 cut(s) 114, 1006, 1420
TaqI TCGA 5 cut(s) 1732, 2573, 2594, 2659, 2753
TatI WGTACW 1 cut(s) 773
TfiI GAWTC 8 cut(s) 746, 1186, 1364, 1396, 1487, 1705, 2570, 2765
TscAI CASTG 7 cut(s) 699, 1273, 1831, 2049, 2131, 2583, 2605
TseFI GTSAC 3 cut(s) 1083, 1814, 2430
TseI GCWGC 2 cut(s) 2240, 2331
Tsp45I GTSAC 3 cut(s) 1083, 1814, 2430
TspGWI ACGGA 1 cut(s) 1933
TspRI CASTG 7 cut(s) 699, 1273, 1831, 2049, 2131, 2583, 2605
Van91I CCANNNNNTGG 1 cut(s) 899
VpaK11BI GGWCC 1 cut(s) 2395
VspI ATTAAT 2 cut(s) 603, 2073
XapI RAATTY 6 cut(s) 637, 1057, 1350, 1495, 1966, 2748
XceI RCATGY 1 cut(s) 2671
XcmI CCANNNNNNNNNTGG 2 cut(s) 818, 2168
XmnI GAANNNNTTC 1 cut(s) 1061
XspI CTAG 3 cut(s) 560, 1907, 2085
ZraI GACGTC 1 cut(s) 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.