Rh6DG441300

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
N/A
Physical Location & Seq
Reverse (-)
61714643 .. 61718534
3892 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG441300.1

Sequence Viewer

Length: 1368 bp
ATGGGCTGCTGCGAGTCCTCCTTTTTACCACGACGGCTGCGGCGGCAAACGAAAGAAGAGAAGAACAACCGACAGCAGCAGCAGCAGCAGAACAAGAGCGCGGCCTCGGCGTTTAACGCCACGTCGTTTGCGAACGGTCCGCCGGAATTGTCCAATGGAAACGACGCCGTCGCGGCGCCGGGATTCTCGGAGTTCTCGCTGGCGGAGCTGAAAACGGCGACGAACAACTTCAGCTCCGAGTTCATCGTCTCCGAGAGCGGCGAGAAAGCCCCCAATGTCGTCTACAAGGGCCGCCTCCAGAATAACAATAACAACAACCGCCGCTGGATCGCCGTCAAGAAATTTACCAAACTGGCCTGGCCTGACCCCAAACAATTCGCCGATGAAGCTTGGGGAGTAGGGAAGCTGAGGCACAAGAGGCTTGCCAATTTGATTGGATATTGCTGCGACGGCGACGAGAGGCTGCTGGTGGCCGAGTACATGCCCAACGATACTCTTGCTAAACATCTCTTTCACTGGGAAAATCAGACCATTGAGTGGGCCATGCGATTAAGAGTTGCTCTATCCATTGCTGAAGCATTGGATTATTGCAGCAGTCAAGGCCGTCCGTTGTACCATGATTTAAATGCGTACAGGGTTCTCTTTGATGAGGCTCTTGATATGATTCGGGGTAGAAACATTCTTCTCTTAATGGATTCACATCTTGAGGGTAATTTTTCAACTGAAGAGGCAACTGTGGTTTTTGATCTTGCTTCACGATGTTTGCAATATGAACCTAGGGAGCGGCCAAATACTAAAGACCTTGCTTCAACACTTGCCCCACTGCAAAATAAATCTGATGTTCCATCTTACGTGATGCTGGGAATTCCAAAGCATGAGGAAGCACCTCCGACTCCACAACACCCTCTTTCTGCCATGGGTGATGCCTGTTCAAGGATGGACCTGACAGCTATCCATCAGATTTTGGTAATGACACACTACAAAGATGATGAAGGAACCAATGAGTTGTCTTTCCAAGAATGGACTCAGCAAATGAAAGATATGTTGGATGCAAGAAAGCGCGGAGACTTGGCATTTCGTGACAAAGATTTTAAATCTGCCATAGACAGTTATTCTCAGTTCATAGACGTCGGGACCATGGTTTCTCCAACTGTCTATGCACGAAGAAGTCTTTGCCATCTCCTTTGTGATCAACCAGATGCTGCCCTCCGAGATGCAATGCAAGCGCAATGTGTCTACCCCGACTGGTCTACGGCATTTTACATGCAGGCAGTTGCTCTTGCCAAACTAGACATGCACAAGGATGCAGCTGACATGCTGAATGAGGCTGCTGCGCTTGAAGAAAAAAGACAACAAAGAGGGAGATGA

Protein Analysis

455

Amino Acids

51.56

Weight (kDa)

5.94

Isoelectric Point (pI)

48.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 93 - 217 2.1e-13 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 103 - 217 4.6e-08 Protein kinase domain
TPR_BSK1_C PF25575 308 - 424 3.9e-60 Serine/threonine-protein kinase BSK1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1131
AccB1I GGYRCC 1 cut(s) 175
AccB7I CCANNNNNTGG 1 cut(s) 537
AccBSI CCGCTC 2 cut(s) 258, 784
AccI GTMKAC 3 cut(s) 282, 1236, 1250
AccII CGCG 3 cut(s) 101, 173, 1062
AclWI GGATC 1 cut(s) 335
AcoI YGGCCR 2 cut(s) 471, 785
AcsI RAATTY 2 cut(s) 341, 864
AcuI CTGAAG 3 cut(s) 214, 594, 744
AcyI GRCGYC 3 cut(s) 165, 176, 1128
AfaI GTAC 3 cut(s) 479, 614, 632
AfiI CCNNNNNNNGG 2 cut(s) 537, 933
AgsI TTSAA 4 cut(s) 720, 810, 933, 1340
AjiI CACGTC 1 cut(s) 123
AjnI CCWGG 1 cut(s) 356
AjuI GAANNNNNNNTTGG 2 cut(s) 1028, 1060
AluBI AGCT 6 cut(s) 208, 234, 389, 406, 950, 1310
AluI AGCT 6 cut(s) 208, 234, 389, 406, 950, 1310
Alw26I GTCTC 2 cut(s) 253, 1059
AlwI GGATC 1 cut(s) 335
AlwNI CAGNNNCTG 1 cut(s) 1202
AoxI GGCC 8 cut(s) 102, 289, 354, 359, 471, 540, 601, 785
ApoI RAATTY 2 cut(s) 341, 864
Asp700I GAANNNNTTC 1 cut(s) 227
AspA2I CCTAGG 1 cut(s) 776
AspLEI GCGC 5 cut(s) 101, 178, 1062, 1228, 1336
AspS9I GGNCC 5 cut(s) 137, 289, 540, 940, 1134
AsuC2I CCSGG 1 cut(s) 180
AsuHPI GGTGA 1 cut(s) 932
AvaII GGWCC 3 cut(s) 137, 940, 1134
AvrII CCTAGG 1 cut(s) 776
BanI GGYRCC 1 cut(s) 175
BbvCI CCTCAGC 1 cut(s) 407
BccI CCATC 4 cut(s) 853, 931, 963, 1185
BceAI ACGGC 7 cut(s) 50, 152, 231, 317, 466, 588, 1269
BcgI CGANNNNNNTGC 2 cut(s) 479, 513
BciT130I CCWGG 1 cut(s) 358
BclI TGATCA 1 cut(s) 1189
BcnI CCSGG 1 cut(s) 180
BcoDI GTCTC 2 cut(s) 253, 1059
BfaI CTAG 2 cut(s) 777, 1289
BfoI RGCGCY 1 cut(s) 179
BglI GCCNNNNNGGC 1 cut(s) 173
BlnI CCTAGG 1 cut(s) 776
Bme1390I CCNGG 2 cut(s) 180, 358
Bme18I GGWCC 3 cut(s) 137, 940, 1134
BmgBI CACGTC 1 cut(s) 123
BmgT120I GGNCC 5 cut(s) 137, 289, 540, 940, 1134
BmiI GGNNCC 3 cut(s) 177, 997, 1135
BmrFI CCNGG 2 cut(s) 180, 358
BmrI ACTGGG 1 cut(s) 526
BmsI GCATC 6 cut(s) 846, 913, 1039, 1189, 1204, 1294
BmuI ACTGGG 1 cut(s) 526
BpmI CTGGAG 1 cut(s) 281
Bpu10I CCTNAGC 1 cut(s) 407
BpuEI CTTGAG 1 cut(s) 725
BpuMI CCSGG 1 cut(s) 180
BsaAI YACGTR 1 cut(s) 853
BsaBI GATNNNNATC 1 cut(s) 699
BsaHI GRCGYC 3 cut(s) 165, 176, 1128
BsaJI CCNNGG 4 cut(s) 105, 776, 915, 1137
BsaXI ACNNNNNCTCC 2 cut(s) 218, 248
Bsc4I CCNNNNNNNGG 2 cut(s) 537, 933
Bse1I ACTGG 3 cut(s) 357, 521, 1250
Bse3DI GCAATG 3 cut(s) 567, 1224, 1235
Bse8I GATNNNNATC 1 cut(s) 699
BseBI CCWGG 1 cut(s) 358
BseDI CCNNGG 4 cut(s) 105, 776, 915, 1137
BseGI GGATG 3 cut(s) 942, 1054, 1309
BseJI GATNNNNATC 1 cut(s) 699
BseLI CCNNNNNNNGG 2 cut(s) 537, 933
BseMI GCAATG 3 cut(s) 567, 1224, 1235
BseMII CTCAG 3 cut(s) 398, 1040, 1130
BseNI ACTGG 3 cut(s) 357, 521, 1250
BseYI CCCAGC 1 cut(s) 859
Bsh1236I CGCG 3 cut(s) 101, 173, 1062
BshFI GGCC 8 cut(s) 104, 291, 356, 361, 473, 542, 603, 787
BshNI GGYRCC 1 cut(s) 175
BsiSI CCGG 2 cut(s) 143, 179
BslFI GGGAC 1 cut(s) 1147
BslI CCNNNNNNNGG 2 cut(s) 537, 933
BsmAI GTCTC 2 cut(s) 253, 1059
BsmBI CGTCTC 1 cut(s) 253
BsmFI GGGAC 1 cut(s) 1147
BsnI GGCC 8 cut(s) 104, 291, 356, 361, 473, 542, 603, 787
Bsp143I GATC 3 cut(s) 327, 745, 1189
Bsp19I CCATGG 2 cut(s) 915, 1137
BspANI GGCC 8 cut(s) 104, 291, 356, 361, 473, 542, 603, 787
BspCNI CTCAG 3 cut(s) 399, 1039, 1129
BspFNI CGCG 3 cut(s) 101, 173, 1062
BspLI GGNNCC 3 cut(s) 177, 997, 1135
BspPI GGATC 1 cut(s) 335
BspT107I GGYRCC 1 cut(s) 175
BsrBI CCGCTC 2 cut(s) 258, 784
BsrDI GCAATG 3 cut(s) 567, 1224, 1235
BsrI ACTGG 3 cut(s) 357, 521, 1250
BssECI CCNNGG 4 cut(s) 105, 776, 915, 1137
BssMI GATC 3 cut(s) 327, 745, 1189
BssNI GRCGYC 3 cut(s) 165, 176, 1128
BssT1I CCWWGG 3 cut(s) 776, 915, 1137
Bst2UI CCWGG 1 cut(s) 358
Bst4CI ACNGT 4 cut(s) 137, 736, 1109, 1153
Bst6I CTCTTC 2 cut(s) 51, 720
BstACI GRCGYC 3 cut(s) 165, 176, 1128
BstBAI YACGTR 1 cut(s) 853
BstC8I GCNNGC 4 cut(s) 201, 423, 1224, 1269
BstDEI CTNAG 3 cut(s) 407, 1026, 1116
BstDSI CCRYGG 2 cut(s) 915, 1137
BstENI CCTNNNNNAGG 1 cut(s) 931
BstF5I GGATG 3 cut(s) 942, 1054, 1309
BstFNI CGCG 3 cut(s) 101, 173, 1062
BstH2I RGCGCY 1 cut(s) 179
BstHHI GCGC 5 cut(s) 101, 178, 1062, 1228, 1336
BstKTI GATC 3 cut(s) 330, 748, 1192
BstMAI GTCTC 2 cut(s) 253, 1059
BstMBI GATC 3 cut(s) 327, 745, 1189
BstNI CCWGG 1 cut(s) 358
BstNSI RCATGY 4 cut(s) 484, 1267, 1297, 1318
BstSCI CCNGG 2 cut(s) 178, 356
BstUI CGCG 3 cut(s) 101, 173, 1062
BsuRI GGCC 8 cut(s) 104, 291, 356, 361, 473, 542, 603, 787
BtgI CCRYGG 2 cut(s) 915, 1137
BtrI CACGTC 1 cut(s) 123
BtsCI GGATG 3 cut(s) 942, 1054, 1309
BtsI GCAGTG 1 cut(s) 821
BtsIMutI CAGTG 2 cut(s) 514, 821
Cac8I GCNNGC 4 cut(s) 201, 423, 1224, 1269
CaiI CAGNNNCTG 1 cut(s) 1202
CfoI GCGC 5 cut(s) 101, 178, 1062, 1228, 1336
Cfr13I GGNCC 5 cut(s) 137, 289, 540, 940, 1134
CpoI CGGWCCG 1 cut(s) 137
CseI GACGC 1 cut(s) 173
Csp6I GTAC 3 cut(s) 478, 613, 631
CspCI CAANNNNNGTGG 2 cut(s) 109, 144
CspI CGGWCCG 1 cut(s) 137
CviAII CATG 9 cut(s) 481, 544, 617, 875, 916, 1138, 1264, 1294, 1315
CviQI GTAC 3 cut(s) 478, 613, 631
DdeI CTNAG 3 cut(s) 407, 1026, 1116
DinI GGCGCC 1 cut(s) 177
DpnI GATC 3 cut(s) 329, 747, 1191
DpnII GATC 3 cut(s) 327, 745, 1189
DraI TTTAAA 2 cut(s) 624, 1093
EaeI YGGCCR 2 cut(s) 471, 785
Eam1104I CTCTTC 2 cut(s) 51, 720
EarI CTCTTC 2 cut(s) 51, 720
EciI GGCGGA 2 cut(s) 129, 218
Eco130I CCWWGG 3 cut(s) 776, 915, 1137
Eco47I GGWCC 3 cut(s) 137, 940, 1134
Eco57I CTGAAG 3 cut(s) 214, 594, 744
EcoNI CCTNNNNNAGG 1 cut(s) 931
EcoRI GAATTC 1 cut(s) 864
EcoRII CCWGG 1 cut(s) 356
EcoT14I CCWWGG 3 cut(s) 776, 915, 1137
EgeI GGCGCC 1 cut(s) 177
EheI GGCGCC 1 cut(s) 177
ErhI CCWWGG 3 cut(s) 776, 915, 1137
Esp3I CGTCTC 1 cut(s) 253
FaeI CATG 9 cut(s) 484, 547, 620, 878, 919, 1141, 1267, 1297, 1318
FaqI GGGAC 1 cut(s) 1147
FatI CATG 9 cut(s) 480, 543, 616, 874, 915, 1137, 1263, 1293, 1314
FbaI TGATCA 1 cut(s) 1189
FblI GTMKAC 3 cut(s) 282, 1236, 1250
FokI GGATG 3 cut(s) 949, 1061, 1316
FspBI CTAG 2 cut(s) 777, 1289
GlaI GCGC 5 cut(s) 100, 177, 1061, 1227, 1335
GsaI CCCAGC 1 cut(s) 863
GsuI CTGGAG 1 cut(s) 281
HaeII RGCGCY 1 cut(s) 179
HaeIII GGCC 8 cut(s) 104, 291, 356, 361, 473, 542, 603, 787
HapII CCGG 2 cut(s) 143, 179
HgaI GACGC 1 cut(s) 173
HhaI GCGC 5 cut(s) 101, 178, 1062, 1228, 1336
Hin1I GRCGYC 3 cut(s) 165, 176, 1128
Hin1II CATG 9 cut(s) 484, 547, 620, 878, 919, 1141, 1267, 1297, 1318
Hin6I GCGC 5 cut(s) 99, 176, 1060, 1226, 1334
HinP1I GCGC 5 cut(s) 99, 176, 1060, 1226, 1334
HindIII AAGCTT 1 cut(s) 387
HinfI GANTC 6 cut(s) 14, 183, 664, 695, 892, 1024
HpaII CCGG 2 cut(s) 143, 179
HphI GGTGA 1 cut(s) 932
Hpy166II GTNNAC 3 cut(s) 283, 1237, 1251
Hpy188I TCNGA 8 cut(s) 190, 238, 253, 528, 838, 891, 960, 1211
Hpy188III TCNNGA 7 cut(s) 298, 337, 656, 704, 756, 1079, 1132
Hpy8I GTNNAC 3 cut(s) 283, 1237, 1251
Hpy99I CGWCG 8 cut(s) 36, 127, 167, 173, 223, 452, 458, 1133
HpyAV CCTTC 1 cut(s) 986
HpyCH4III ACNGT 4 cut(s) 137, 736, 1109, 1153
HpyCH4IV ACGT 3 cut(s) 122, 852, 1128
HpyF3I CTNAG 3 cut(s) 407, 1026, 1116
HpySE526I ACGT 3 cut(s) 122, 852, 1128
Hsp92I GRCGYC 3 cut(s) 165, 176, 1128
Hsp92II CATG 9 cut(s) 484, 547, 620, 878, 919, 1141, 1267, 1297, 1318
HspAI GCGC 5 cut(s) 99, 176, 1060, 1226, 1334
KasI GGCGCC 1 cut(s) 175
Ksp22I TGATCA 1 cut(s) 1189
Kzo9I GATC 3 cut(s) 327, 745, 1189
LmnI GCTCC 3 cut(s) 205, 239, 781
LweI GCATC 6 cut(s) 846, 913, 1039, 1189, 1204, 1294
MaeI CTAG 2 cut(s) 777, 1289
MaeII ACGT 3 cut(s) 122, 852, 1128
MaeIII GTNAC 1 cut(s) 1079
MalI GATC 3 cut(s) 329, 747, 1191
MbiI CCGCTC 2 cut(s) 258, 784
MboI GATC 3 cut(s) 327, 745, 1189
MboII GAAGA 6 cut(s) 68, 73, 674, 737, 1176, 1352
MluCI AATT 6 cut(s) 146, 341, 374, 427, 712, 864
Mly113I GGCGCC 1 cut(s) 176
MlyI GAGTC 3 cut(s) 23, 886, 1018
MmeI TCCRAC 3 cut(s) 914, 1026, 1172
MroXI GAANNNNTTC 1 cut(s) 227
MseI TTAA 5 cut(s) 114, 551, 623, 689, 1092
MslI CAYNNNNRTG 1 cut(s) 1302
MspA1I CMGCKG 2 cut(s) 324, 1310
MspI CCGG 2 cut(s) 143, 179
MspR9I CCNGG 2 cut(s) 180, 358
MvaI CCWGG 1 cut(s) 358
MvnI CGCG 3 cut(s) 101, 173, 1062
NarI GGCGCC 1 cut(s) 176
NciI CCSGG 1 cut(s) 180
NcoI CCATGG 2 cut(s) 915, 1137
NdeII GATC 3 cut(s) 327, 745, 1189
NlaIII CATG 9 cut(s) 484, 547, 620, 878, 919, 1141, 1267, 1297, 1318
NlaIV GGNNCC 3 cut(s) 177, 997, 1135
NmeAIII GCCGAG 2 cut(s) 86, 499
NmuCI GTSAC 1 cut(s) 1079
NspI RCATGY 4 cut(s) 484, 1267, 1297, 1318
PcsI WCGNNNNNNNCGW 1 cut(s) 128
PdmI GAANNNNTTC 1 cut(s) 227
PfeI GAWTC 3 cut(s) 183, 664, 695
PflFI GACNNNGTC 1 cut(s) 167
PflMI CCANNNNNTGG 1 cut(s) 537
PleI GAGTC 3 cut(s) 22, 886, 1018
PluTI GGCGCC 1 cut(s) 179
PpsI GAGTC 3 cut(s) 22, 886, 1018
Ppu21I YACGTR 1 cut(s) 853
Psp6I CCWGG 1 cut(s) 356
PspFI CCCAGC 1 cut(s) 859
PspGI CCWGG 1 cut(s) 356
PspN4I GGNNCC 3 cut(s) 177, 997, 1135
PspPI GGNCC 5 cut(s) 137, 289, 540, 940, 1134
PstNI CAGNNNCTG 1 cut(s) 1202
PsyI GACNNNGTC 1 cut(s) 167
PvuII CAGCTG 1 cut(s) 1310
RsaI GTAC 3 cut(s) 479, 614, 632
RsaNI GTAC 3 cut(s) 478, 613, 631
RseI CAYNNNNRTG 1 cut(s) 1302
Rsr2I CGGWCCG 1 cut(s) 137
RsrII CGGWCCG 1 cut(s) 137
SaqAI TTAA 5 cut(s) 114, 551, 623, 689, 1092
Sau3AI GATC 3 cut(s) 327, 745, 1189
Sau96I GGNCC 5 cut(s) 137, 289, 540, 940, 1134
SchI GAGTC 3 cut(s) 23, 886, 1018
ScrFI CCNGG 2 cut(s) 180, 358
SfaNI GCATC 6 cut(s) 846, 913, 1039, 1189, 1204, 1294
SfoI GGCGCC 1 cut(s) 177
SinI GGWCC 3 cut(s) 137, 940, 1134
SmiI ATTTAAAT 1 cut(s) 624
SmiMI CAYNNNNRTG 1 cut(s) 1302
SmlI CTYRAG 1 cut(s) 704
SmoI CTYRAG 1 cut(s) 704
Sse9I AATT 6 cut(s) 146, 341, 374, 427, 712, 864
SspDI GGCGCC 1 cut(s) 175
SspMI CTAG 2 cut(s) 777, 1289
StyD4I CCNGG 2 cut(s) 178, 356
StyI CCWWGG 3 cut(s) 776, 915, 1137
SwaI ATTTAAAT 1 cut(s) 624
TaaI ACNGT 4 cut(s) 137, 736, 1109, 1153
TaiI ACGT 3 cut(s) 125, 855, 1131
TasI AATT 6 cut(s) 146, 341, 374, 427, 712, 864
TatI WGTACW 1 cut(s) 477
TauI GCSGC 8 cut(s) 43, 46, 104, 176, 261, 294, 324, 787
TfiI GAWTC 3 cut(s) 183, 664, 695
Tru1I TTAA 5 cut(s) 114, 551, 623, 689, 1092
Tru9I TTAA 5 cut(s) 114, 551, 623, 689, 1092
TscAI CASTG 2 cut(s) 521, 828
TseFI GTSAC 1 cut(s) 1079
Tsp45I GTSAC 1 cut(s) 1079
TspDTI ATGAA 6 cut(s) 232, 399, 786, 1005, 1049, 1111
TspGWI ACGGA 1 cut(s) 597
TspRI CASTG 2 cut(s) 521, 828
Tth111I GACNNNGTC 1 cut(s) 167
Van91I CCANNNNNTGG 1 cut(s) 537
VpaK11BI GGWCC 3 cut(s) 137, 940, 1134
XagI CCTNNNNNAGG 1 cut(s) 931
XapI RAATTY 2 cut(s) 341, 864
XceI RCATGY 4 cut(s) 484, 1267, 1297, 1318
XmaJI CCTAGG 1 cut(s) 776
XmiI GTMKAC 3 cut(s) 282, 1236, 1250
XmnI GAANNNNTTC 1 cut(s) 227
XspI CTAG 2 cut(s) 777, 1289
ZraI GACGTC 1 cut(s) 1129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.