Rh7AG186800
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
N/A
Physical Location & Seq
Forward (+)
16687971 .. 16688186
216 bp
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UTR
Exon/CDS
Intron
Rh7AG186800.1

Sequence Viewer

Length: 216 bp
ATGGCTATGGCTACAAAATATGAGGGACCAATGATTGGCATCGACCTCGGAACAACTTACTCATGTGTGGGAGTTTGGCAACACGGTCATGTTGAGATTATAGCGAATGATCAGGGCAATAGAACAACACCGTCTTACGTTGCTTTTACGAACAGTGGGCGTTTAATTGGTGATGCTATGATCAGAAATGAAAAGGCTAGGGTTATTTTGCGGTAG
Functional Annotation

Protein Analysis

71

Amino Acids

7.8

Weight (kDa)

7.94

Isoelectric Point (pI)

18.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 11 - 60 1.5e-20 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 35
AciI CCGC 1 cut(s) 211
AfiI CCNNNNNNNGG 1 cut(s) 35
AspS9I GGNCC 1 cut(s) 26
AsuHPI GGTGA 1 cut(s) 182
AvaII GGWCC 1 cut(s) 26
BcgI CGANNNNNNTGC 2 cut(s) 28, 62
BclI TGATCA 2 cut(s) 109, 180
BfaI CTAG 1 cut(s) 198
Bme18I GGWCC 1 cut(s) 26
BmgT120I GGNCC 1 cut(s) 26
BmiI GGNNCC 1 cut(s) 27
BmsI GCATC 2 cut(s) 48, 163
BsaBI GATNNNNATC 1 cut(s) 38
BsaJI CCNNGG 1 cut(s) 46
Bsc4I CCNNNNNNNGG 1 cut(s) 35
Bse8I GATNNNNATC 1 cut(s) 38
BseDI CCNNGG 1 cut(s) 46
BseJI GATNNNNATC 1 cut(s) 38
BseLI CCNNNNNNNGG 1 cut(s) 35
BslFI GGGAC 1 cut(s) 39
BslI CCNNNNNNNGG 1 cut(s) 35
BsmFI GGGAC 1 cut(s) 39
Bsp143I GATC 2 cut(s) 109, 180
BspACI CCGC 1 cut(s) 211
BspLI GGNNCC 1 cut(s) 27
BssECI CCNNGG 1 cut(s) 46
BssMI GATC 2 cut(s) 109, 180
Bst4CI ACNGT 3 cut(s) 86, 132, 155
BstKTI GATC 2 cut(s) 112, 183
BstMBI GATC 2 cut(s) 109, 180
BtsIMutI CAGTG 1 cut(s) 160
Cfr13I GGNCC 1 cut(s) 26
CviAII CATG 2 cut(s) 63, 89
CviJI RGCY 3 cut(s) 5, 11, 197
CviKI_1 RGCY 3 cut(s) 5, 11, 197
DpnI GATC 2 cut(s) 111, 182
DpnII GATC 2 cut(s) 109, 180
Eco47I GGWCC 1 cut(s) 26
FaeI CATG 2 cut(s) 66, 92
FaiI YATR 6 cut(s) 8, 21, 64, 90, 101, 179
FaqI GGGAC 1 cut(s) 39
FatI CATG 2 cut(s) 62, 88
FbaI TGATCA 2 cut(s) 109, 180
FspBI CTAG 1 cut(s) 198
Hin1II CATG 2 cut(s) 66, 92
HphI GGTGA 1 cut(s) 182
Hpy188I TCNGA 2 cut(s) 50, 185
HpyCH4III ACNGT 3 cut(s) 86, 132, 155
HpyCH4IV ACGT 1 cut(s) 138
HpySE526I ACGT 1 cut(s) 138
Hsp92II CATG 2 cut(s) 66, 92
Ksp22I TGATCA 2 cut(s) 109, 180
Kzo9I GATC 2 cut(s) 109, 180
LpnPI CCDG 1 cut(s) 98
LweI GCATC 2 cut(s) 48, 163
MaeI CTAG 1 cut(s) 198
MaeII ACGT 1 cut(s) 138
MalI GATC 2 cut(s) 111, 182
MboI GATC 2 cut(s) 109, 180
MluCI AATT 1 cut(s) 165
MnlI CCTC 2 cut(s) 16, 56
MseI TTAA 1 cut(s) 164
MslI CAYNNNNRTG 1 cut(s) 87
NdeII GATC 2 cut(s) 109, 180
NlaIII CATG 2 cut(s) 66, 92
NlaIV GGNNCC 1 cut(s) 27
PflMI CCANNNNNTGG 1 cut(s) 35
PspN4I GGNNCC 1 cut(s) 27
PspPI GGNCC 1 cut(s) 26
RseI CAYNNNNRTG 1 cut(s) 87
SaqAI TTAA 1 cut(s) 164
Sau3AI GATC 2 cut(s) 109, 180
Sau96I GGNCC 1 cut(s) 26
SetI ASST 2 cut(s) 48, 141
SfaNI GCATC 2 cut(s) 48, 163
SgeI CNNG 6 cut(s) 59, 75, 95, 101, 125, 210
SinI GGWCC 1 cut(s) 26
SmiMI CAYNNNNRTG 1 cut(s) 87
Sse9I AATT 1 cut(s) 165
SsiI CCGC 1 cut(s) 211
SspMI CTAG 1 cut(s) 198
TaaI ACNGT 3 cut(s) 86, 132, 155
TaiI ACGT 1 cut(s) 141
TaqI TCGA 1 cut(s) 42
TasI AATT 1 cut(s) 165
Tru1I TTAA 1 cut(s) 164
Tru9I TTAA 1 cut(s) 164
TscAI CASTG 1 cut(s) 160
TspDTI ATGAA 1 cut(s) 204
TspRI CASTG 1 cut(s) 160
Van91I CCANNNNNTGG 1 cut(s) 35
VpaK11BI GGWCC 1 cut(s) 26
XspI CTAG 1 cut(s) 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.