Rh7AG272900
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
N/A
Physical Location & Seq
Reverse (-)
28540833 .. 28542235
1403 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG272900.1

Sequence Viewer

Length: 522 bp
ATGTGGCAGAGTTGCTATTATGTTCCACCATCCCTTCGTCCCAAACTAACGACTGCTAGGACACCACCATTTGCTGGAACAAGGGGAGCGTTGGAGCAGCAATCTGCTAGAAAGGTCTCTGGGACTTTATCCAGTGCAAAGCTCACTAGCAGTTTTCCTTCTCCAAAGTTGCATGCTTCTATAGGCACGGGTGTGCAGCGCAAATTGGATATGGCTAACCAGGATGCTAAAAAGAATGATAAATACTTGAAGAGCTCTGCCAATCAACAAAAATATCGGCCCCCTGGAAAGAGCAGTCCTACCTCTGTGAACAAGGCACGGGTTCCACGTGGTGTTTCAGATGCATCTGAGAAGCTATCAAACATGACAATTGGTTCCCGCAGGCAATCTGTTGGGCAAACGCTGCGTCCACCTGCCATGAAAGCTGGAGCCCAGTGGTTTGGCGAGACTGGAAACTTGTATCTCAGGCCTGTTCAAGAGATCCAACCTGGCAGATCCTATTCTCGGAAAGTCGCGGGATGA

Protein Analysis

173

Amino Acids

18.82

Weight (kDa)

10.81

Isoelectric Point (pI)

57.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 421
Acc36I ACCTGC 1 cut(s) 421
AccB7I CCANNNNNTGG 1 cut(s) 74
AccII CGCG 1 cut(s) 515
AciI CCGC 2 cut(s) 379, 515
AclWI GGATC 2 cut(s) 475, 489
AcvI CACGTG 1 cut(s) 329
AdeI CACNNNGTG 1 cut(s) 332
AfiI CCNNNNNNNGG 2 cut(s) 74, 504
AgsI TTSAA 2 cut(s) 250, 476
AjnI CCWGG 3 cut(s) 219, 283, 487
AleI CACNNNNGTG 1 cut(s) 191
AluBI AGCT 4 cut(s) 142, 255, 355, 425
AluI AGCT 4 cut(s) 142, 255, 355, 425
Alw21I GWGCWC 1 cut(s) 257
Alw26I GTCTC 2 cut(s) 121, 440
AlwI GGATC 2 cut(s) 475, 489
AoxI GGCC 2 cut(s) 278, 467
ApeKI GCWGC 3 cut(s) 97, 196, 403
ArsI GACNNNNNNTTYG 2 cut(s) 391, 423
AspLEI GCGC 1 cut(s) 201
AspS9I GGNCC 1 cut(s) 279
BanII GRGCYC 2 cut(s) 257, 433
BbrPI CACGTG 1 cut(s) 329
Bbv12I GWGCWC 1 cut(s) 257
BbvI GCAGC 3 cut(s) 109, 208, 390
BccI CCATC 1 cut(s) 37
BciT130I CCWGG 3 cut(s) 221, 285, 489
BcoDI GTCTC 2 cut(s) 121, 440
BfaI CTAG 3 cut(s) 57, 108, 147
BfmI CTRYAG 1 cut(s) 180
BfuAI ACCTGC 1 cut(s) 421
BisI GCNGC 3 cut(s) 98, 197, 404
BlsI GCNGC 3 cut(s) 99, 198, 405
Bme1390I CCNGG 3 cut(s) 221, 285, 489
BmgT120I GGNCC 1 cut(s) 279
BmiI GGNNCC 4 cut(s) 281, 324, 376, 430
BmrFI CCNGG 3 cut(s) 221, 285, 489
BmrI ACTGGG 1 cut(s) 427
BmsI GCATC 3 cut(s) 214, 331, 353
BmuI ACTGGG 1 cut(s) 427
BpmI CTGGAG 1 cut(s) 447
BsaAI YACGTR 1 cut(s) 329
BsaI GGTCTC 1 cut(s) 121
BsaJI CCNNGG 1 cut(s) 283
Bsc4I CCNNNNNNNGG 2 cut(s) 74, 504
Bse1I ACTGG 3 cut(s) 132, 433, 454
BseBI CCWGG 3 cut(s) 221, 285, 489
BseDI CCNNGG 1 cut(s) 283
BseGI GGATG 2 cut(s) 29, 229
BseLI CCNNNNNNNGG 2 cut(s) 74, 504
BseMII CTCAG 2 cut(s) 339, 478
BseNI ACTGG 3 cut(s) 132, 433, 454
BseXI GCAGC 3 cut(s) 109, 208, 390
BsgI GTGCAG 1 cut(s) 215
Bsh1236I CGCG 1 cut(s) 515
BshFI GGCC 2 cut(s) 280, 469
BsiHKAI GWGCWC 1 cut(s) 257
BslFI GGGAC 2 cut(s) 24, 136
BslI CCNNNNNNNGG 2 cut(s) 74, 504
BsmAI GTCTC 2 cut(s) 121, 440
BsmFI GGGAC 2 cut(s) 24, 136
BsnI GGCC 2 cut(s) 280, 469
Bso31I GGTCTC 1 cut(s) 121
Bsp1286I GDGCHC 2 cut(s) 257, 433
Bsp143I GATC 2 cut(s) 480, 494
BspACI CCGC 2 cut(s) 379, 515
BspANI GGCC 2 cut(s) 280, 469
BspCNI CTCAG 2 cut(s) 340, 477
BspFNI CGCG 1 cut(s) 515
BspLI GGNNCC 4 cut(s) 281, 324, 376, 430
BspMI ACCTGC 1 cut(s) 421
BspPI GGATC 2 cut(s) 475, 489
BspQI GCTCTTC 1 cut(s) 245
BspTNI GGTCTC 1 cut(s) 121
BsrI ACTGG 3 cut(s) 132, 433, 454
BssECI CCNNGG 1 cut(s) 283
BssMI GATC 2 cut(s) 480, 494
Bst2UI CCWGG 3 cut(s) 221, 285, 489
Bst6I CTCTTC 1 cut(s) 245
BstAPI GCANNNNNTGC 1 cut(s) 403
BstBAI YACGTR 1 cut(s) 329
BstC8I GCNNGC 2 cut(s) 174, 383
BstDEI CTNAG 2 cut(s) 348, 464
BstF5I GGATG 2 cut(s) 29, 229
BstFNI CGCG 1 cut(s) 515
BstHHI GCGC 1 cut(s) 201
BstKTI GATC 2 cut(s) 483, 497
BstMAI GTCTC 2 cut(s) 121, 440
BstMBI GATC 2 cut(s) 480, 494
BstMWI GCNNNNNNNGC 2 cut(s) 403, 422
BstNI CCWGG 3 cut(s) 221, 285, 489
BstNSI RCATGY 1 cut(s) 176
BstSCI CCNGG 3 cut(s) 219, 283, 487
BstSFI CTRYAG 1 cut(s) 180
BstUI CGCG 1 cut(s) 515
BstV1I GCAGC 3 cut(s) 109, 208, 390
BstX2I RGATCY 2 cut(s) 480, 494
BstXI CCANNNNNNTGG 1 cut(s) 440
BstYI RGATCY 2 cut(s) 480, 494
BsuRI GGCC 2 cut(s) 280, 469
BtsCI GGATG 2 cut(s) 29, 229
BtsIMutI CAGTG 2 cut(s) 139, 440
BveI ACCTGC 1 cut(s) 421
Cac8I GCNNGC 2 cut(s) 174, 383
CfoI GCGC 1 cut(s) 201
Cfr13I GGNCC 1 cut(s) 279
CseI GACGC 1 cut(s) 395
CviAII CATG 3 cut(s) 173, 364, 418
CviJI RGCY 8 cut(s) 142, 215, 255, 280, 355, 425, 431, 469
CviKI_1 RGCY 8 cut(s) 142, 215, 255, 280, 355, 425, 431, 469
DdeI CTNAG 2 cut(s) 348, 464
DpnI GATC 2 cut(s) 482, 496
DpnII GATC 2 cut(s) 480, 494
DraIII CACNNNGTG 1 cut(s) 332
Eam1104I CTCTTC 1 cut(s) 245
EarI CTCTTC 1 cut(s) 245
Ecl136II GAGCTC 1 cut(s) 255
Eco147I AGGCCT 1 cut(s) 469
Eco24I GRGCYC 2 cut(s) 257, 433
Eco31I GGTCTC 1 cut(s) 121
Eco53kI GAGCTC 1 cut(s) 255
Eco72I CACGTG 1 cut(s) 329
EcoICRI GAGCTC 1 cut(s) 255
EcoRII CCWGG 3 cut(s) 219, 283, 487
EcoT22I ATGCAT 1 cut(s) 346
EcoT38I GRGCYC 2 cut(s) 257, 433
FaeI CATG 3 cut(s) 176, 367, 421
FaiI YATR 6 cut(s) 21, 174, 182, 212, 365, 419
FaqI GGGAC 2 cut(s) 24, 136
FatI CATG 3 cut(s) 172, 363, 417
FauI CCCGC 2 cut(s) 386, 508
Fnu4HI GCNGC 3 cut(s) 98, 197, 404
FokI GGATG 2 cut(s) 16, 236
FriOI GRGCYC 2 cut(s) 257, 433
Fsp4HI GCNGC 3 cut(s) 98, 197, 404
FspBI CTAG 3 cut(s) 57, 108, 147
GlaI GCGC 1 cut(s) 200
GluI GCNGC 3 cut(s) 98, 197, 404
GsuI CTGGAG 1 cut(s) 447
HaeIII GGCC 2 cut(s) 280, 469
HgaI GACGC 1 cut(s) 395
HhaI GCGC 1 cut(s) 201
Hin1II CATG 3 cut(s) 176, 367, 421
Hin6I GCGC 1 cut(s) 199
HinP1I GCGC 1 cut(s) 199
Hpy166II GTNNAC 2 cut(s) 310, 410
Hpy188I TCNGA 3 cut(s) 340, 349, 507
Hpy188III TCNNGA 1 cut(s) 476
Hpy8I GTNNAC 2 cut(s) 310, 410
HpyAV CCTTC 2 cut(s) 44, 168
HpyCH4IV ACGT 1 cut(s) 328
HpyCH4V TGCA 4 cut(s) 137, 172, 196, 344
HpyF10VI GCNNNNNNNGC 2 cut(s) 403, 422
HpyF3I CTNAG 2 cut(s) 348, 464
HpySE526I ACGT 1 cut(s) 328
Hsp92II CATG 3 cut(s) 176, 367, 421
HspAI GCGC 1 cut(s) 199
Kzo9I GATC 2 cut(s) 480, 494
LguI GCTCTTC 1 cut(s) 245
LmnI GCTCC 3 cut(s) 86, 94, 428
Lsp1109I GCAGC 3 cut(s) 109, 208, 390
LweI GCATC 3 cut(s) 214, 331, 353
MaeI CTAG 3 cut(s) 57, 108, 147
MaeII ACGT 1 cut(s) 328
MalI GATC 2 cut(s) 482, 496
MboI GATC 2 cut(s) 480, 494
MboII GAAGA 1 cut(s) 262
MfeI CAATTG 1 cut(s) 369
MflI RGATCY 2 cut(s) 480, 494
MhlI GDGCHC 2 cut(s) 257, 433
MluCI AATT 2 cut(s) 203, 369
MmeI TCCRAC 2 cut(s) 72, 508
MnlI CCTC 1 cut(s) 313
Mph1103I ATGCAT 1 cut(s) 346
MslI CAYNNNNRTG 1 cut(s) 191
MspR9I CCNGG 3 cut(s) 221, 285, 489
MunI CAATTG 1 cut(s) 369
MvaI CCWGG 3 cut(s) 221, 285, 489
MvnI CGCG 1 cut(s) 515
MwoI GCNNNNNNNGC 2 cut(s) 403, 422
NdeII GATC 2 cut(s) 480, 494
NlaIII CATG 3 cut(s) 176, 367, 421
NlaIV GGNNCC 4 cut(s) 281, 324, 376, 430
NsiI ATGCAT 1 cut(s) 346
NspI RCATGY 1 cut(s) 176
OliI CACNNNNGTG 1 cut(s) 191
PaeI GCATGC 1 cut(s) 176
PaqCI CACCTGC 1 cut(s) 421
PceI AGGCCT 1 cut(s) 469
PciSI GCTCTTC 1 cut(s) 245
PcsI WCGNNNNNNNCGW 1 cut(s) 325
PflMI CCANNNNNTGG 1 cut(s) 74
PkrI GCNGC 3 cut(s) 99, 198, 405
PmaCI CACGTG 1 cut(s) 329
PmlI CACGTG 1 cut(s) 329
Ppu21I YACGTR 1 cut(s) 329
Psp124BI GAGCTC 1 cut(s) 257
Psp6I CCWGG 3 cut(s) 219, 283, 487
PspCI CACGTG 1 cut(s) 329
PspGI CCWGG 3 cut(s) 219, 283, 487
PspN4I GGNNCC 4 cut(s) 281, 324, 376, 430
PspPI GGNCC 1 cut(s) 279
PsuI RGATCY 2 cut(s) 480, 494
RseI CAYNNNNRTG 1 cut(s) 191
SacI GAGCTC 1 cut(s) 257
SapI GCTCTTC 1 cut(s) 245
SatI GCNGC 3 cut(s) 98, 197, 404
Sau3AI GATC 2 cut(s) 480, 494
Sau96I GGNCC 1 cut(s) 279
ScrFI CCNGG 3 cut(s) 221, 285, 489
SduI GDGCHC 2 cut(s) 257, 433
SetI ASST 9 cut(s) 117, 144, 257, 305, 331, 357, 415, 427, 490
SfaNI GCATC 3 cut(s) 214, 331, 353
SfcI CTRYAG 1 cut(s) 180
SmiMI CAYNNNNRTG 1 cut(s) 191
SphI GCATGC 1 cut(s) 176
Sse9I AATT 2 cut(s) 203, 369
SseBI AGGCCT 1 cut(s) 469
SsiI CCGC 2 cut(s) 379, 515
SspMI CTAG 3 cut(s) 57, 108, 147
SstI GAGCTC 1 cut(s) 257
StuI AGGCCT 1 cut(s) 469
StyD4I CCNGG 3 cut(s) 219, 283, 487
TaiI ACGT 1 cut(s) 331
TasI AATT 2 cut(s) 203, 369
TscAI CASTG 2 cut(s) 139, 440
TseI GCWGC 3 cut(s) 97, 196, 403
TspDTI ATGAA 1 cut(s) 434
TspRI CASTG 2 cut(s) 139, 440
Van91I CCANNNNNTGG 1 cut(s) 74
XceI RCATGY 1 cut(s) 176
XspI CTAG 3 cut(s) 57, 108, 147
Zsp2I ATGCAT 1 cut(s) 346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.