Rh7AG293500
NAC Family

NAC domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
N/A
Physical Location & Seq
Forward (+)
31989916 .. 31994007
4092 bp
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UTR
Exon/CDS
Intron
Rh7AG293500.1

Sequence Viewer

Length: 228 bp
ATGGTGCCATCCATTGGTAATGCACCACTAACAATGCCATCAGAAGATGATGCTGCATTCGCAGCTGAACTAGAAGAGTCATTGGAATGCTTTGAAGATGATAATGCACCCTCAGAAGCTCGAGCAATTGGCTTTCAAGGTGAGGGGAATGGTGGACTCCAACAATTAGCAGCCGAGGTGCCAAAGAAGTTAACCGAGCTAGTAGCCAATCTTTCCAACATAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

7.86

Weight (kDa)

4.05

Isoelectric Point (pI)

73.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 4, 178
AccB7I CCANNNNNTGG 1 cut(s) 14
AfiI CCNNNNNNNGG 1 cut(s) 14
AgsI TTSAA 2 cut(s) 95, 137
AluBI AGCT 3 cut(s) 65, 119, 199
AluI AGCT 3 cut(s) 65, 119, 199
Ama87I CYCGRG 1 cut(s) 120
ApeKI GCWGC 3 cut(s) 53, 62, 170
AsuHPI GGTGA 1 cut(s) 152
AvaI CYCGRG 1 cut(s) 120
BanI GGYRCC 2 cut(s) 4, 178
BbvI GCAGC 3 cut(s) 40, 74, 182
BccI CCATC 2 cut(s) 16, 46
BfaI CTAG 2 cut(s) 71, 200
BisI GCNGC 3 cut(s) 54, 63, 171
BlsI GCNGC 3 cut(s) 55, 64, 172
BmeT110I CYCGRG 1 cut(s) 120
BmiI GGNNCC 2 cut(s) 6, 180
BmsI GCATC 1 cut(s) 40
BsaJI CCNNGG 1 cut(s) 174
Bsc4I CCNNNNNNNGG 1 cut(s) 14
BseDI CCNNGG 1 cut(s) 174
BseGI GGATG 1 cut(s) 8
BseLI CCNNNNNNNGG 1 cut(s) 14
BseMII CTCAG 1 cut(s) 126
BseXI GCAGC 3 cut(s) 40, 74, 182
BshNI GGYRCC 2 cut(s) 4, 178
BsiHKCI CYCGRG 1 cut(s) 120
BslI CCNNNNNNNGG 1 cut(s) 14
BsmI GAATGC 2 cut(s) 56, 92
BsoBI CYCGRG 1 cut(s) 120
BspCNI CTCAG 1 cut(s) 125
BspLI GGNNCC 2 cut(s) 6, 180
BspT107I GGYRCC 2 cut(s) 4, 178
BssECI CCNNGG 1 cut(s) 174
Bst6I CTCTTC 1 cut(s) 69
BstDEI CTNAG 1 cut(s) 112
BstF5I GGATG 1 cut(s) 8
BstMWI GCNNNNNNNGC 2 cut(s) 59, 62
BstV1I GCAGC 3 cut(s) 40, 74, 182
BtsCI GGATG 1 cut(s) 8
CviJI RGCY 6 cut(s) 65, 119, 132, 173, 199, 206
CviKI_1 RGCY 6 cut(s) 65, 119, 132, 173, 199, 206
DdeI CTNAG 1 cut(s) 112
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
Eco88I CYCGRG 1 cut(s) 120
FaiI YATR 1 cut(s) 221
Fnu4HI GCNGC 3 cut(s) 54, 63, 171
Fsp4HI GCNGC 3 cut(s) 54, 63, 171
FspBI CTAG 2 cut(s) 71, 200
GluI GCNGC 3 cut(s) 54, 63, 171
HincII GTYRAC 1 cut(s) 192
HindII GTYRAC 1 cut(s) 192
HinfI GANTC 2 cut(s) 77, 156
HpaI GTTAAC 1 cut(s) 192
HphI GGTGA 1 cut(s) 152
Hpy166II GTNNAC 2 cut(s) 155, 192
Hpy188I TCNGA 2 cut(s) 43, 115
Hpy8I GTNNAC 2 cut(s) 155, 192
HpyCH4V TGCA 3 cut(s) 23, 56, 107
HpyF10VI GCNNNNNNNGC 2 cut(s) 59, 62
HpyF3I CTNAG 1 cut(s) 112
KspAI GTTAAC 1 cut(s) 192
Lsp1109I GCAGC 3 cut(s) 40, 74, 182
LweI GCATC 1 cut(s) 40
MaeI CTAG 2 cut(s) 71, 200
MboII GAAGA 3 cut(s) 56, 86, 107
MfeI CAATTG 1 cut(s) 126
MluCI AATT 2 cut(s) 126, 164
MlyI GAGTC 2 cut(s) 86, 150
MmeI TCCRAC 1 cut(s) 184
MnlI CCTC 3 cut(s) 121, 136, 169
MseI TTAA 1 cut(s) 191
MslI CAYNNNNRTG 1 cut(s) 85
MspA1I CMGCKG 1 cut(s) 65
MunI CAATTG 1 cut(s) 126
Mva1269I GAATGC 2 cut(s) 56, 92
MwoI GCNNNNNNNGC 2 cut(s) 59, 62
NlaIV GGNNCC 2 cut(s) 6, 180
NmeAIII GCCGAG 1 cut(s) 199
PaeR7I CTCGAG 1 cut(s) 120
PctI GAATGC 2 cut(s) 56, 92
PflMI CCANNNNNTGG 1 cut(s) 14
PkrI GCNGC 3 cut(s) 55, 64, 172
PleI GAGTC 2 cut(s) 85, 150
PpsI GAGTC 2 cut(s) 85, 150
PspN4I GGNNCC 2 cut(s) 6, 180
PspXI VCTCGAGB 1 cut(s) 120
PvuII CAGCTG 1 cut(s) 65
RseI CAYNNNNRTG 1 cut(s) 85
SaqAI TTAA 1 cut(s) 191
SatI GCNGC 3 cut(s) 54, 63, 171
SchI GAGTC 2 cut(s) 86, 150
SetI ASST 5 cut(s) 67, 121, 142, 180, 201
SfaNI GCATC 1 cut(s) 40
Sfr274I CTCGAG 1 cut(s) 120
SgeI CNNG 7 cut(s) 83, 132, 134, 149, 187, 208, 212
SlaI CTCGAG 1 cut(s) 120
SmiMI CAYNNNNRTG 1 cut(s) 85
SmlI CTYRAG 1 cut(s) 120
SmoI CTYRAG 1 cut(s) 120
Sse9I AATT 2 cut(s) 126, 164
SspMI CTAG 2 cut(s) 71, 200
TaqI TCGA 1 cut(s) 121
TasI AATT 2 cut(s) 126, 164
Tru1I TTAA 1 cut(s) 191
Tru9I TTAA 1 cut(s) 191
TseI GCWGC 3 cut(s) 53, 62, 170
Van91I CCANNNNNTGG 1 cut(s) 14
XhoI CTCGAG 1 cut(s) 120
XspI CTAG 2 cut(s) 71, 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.