Rh7BG245900

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
N/A
Physical Location & Seq
Forward (+)
21903326 .. 21905858
2533 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG245900.1

Sequence Viewer

Length: 396 bp
ATGCAAAAGTCCATTGCAGTAGCTCATTATCTACAACTTCATATTCTTATATTATGGTTGGATATAGAGTGGGGGATCTTCCACCGTCTTGTAATATGGTCACAGCCAGTCTTGCAATGCTACAACAACCTTGGGGGCACCGCTCATTTTGCTCTCACTCGTCATCAGCTGAAAAGGGGTTTTGATCTTTCATGGGGGAAATATATCTGTGAAAAGCATTGCCAGGCAAGTGATGCTTTCTGTTCCTTTTCGAATTACCGGTGGGAGTGCTATGACAACTGCTATTCACCATTTACAACCATCTATTGTTTTCGAGATTACCTGAAACGTGGTTTCATTCCCATCGCCGAGTTCACTGTATTCGAGAACTTGTCAGCAGCAAACAAAACCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

131

Amino Acids

15.47

Weight (kDa)

8.17

Isoelectric Point (pI)

46.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 137
AccBSI CCGCTC 1 cut(s) 143
AciI CCGC 1 cut(s) 141
AclWI GGATC 1 cut(s) 83
AgeI ACCGGT 1 cut(s) 258
AjnI CCWGG 1 cut(s) 222
AluBI AGCT 2 cut(s) 23, 169
AluI AGCT 2 cut(s) 23, 169
AlwI GGATC 1 cut(s) 83
ApeKI GCWGC 1 cut(s) 377
AsiGI ACCGGT 1 cut(s) 258
AsuHPI GGTGA 1 cut(s) 279
AsuII TTCGAA 1 cut(s) 251
BaeGI GKGCMC 1 cut(s) 140
BanI GGYRCC 1 cut(s) 137
BbvI GCAGC 1 cut(s) 389
BccI CCATC 2 cut(s) 308, 350
BciT130I CCWGG 1 cut(s) 224
BisI GCNGC 1 cut(s) 378
BlsI GCNGC 1 cut(s) 379
Bme1390I CCNGG 1 cut(s) 224
BmiI GGNNCC 1 cut(s) 139
BmrFI CCNGG 1 cut(s) 224
BmsI GCATC 1 cut(s) 223
Bpu14I TTCGAA 1 cut(s) 251
BsaJI CCNNGG 1 cut(s) 130
BsaWI WCCGGW 1 cut(s) 258
Bse118I RCCGGY 1 cut(s) 258
Bse1I ACTGG 1 cut(s) 107
Bse3DI GCAATG 3 cut(s) 12, 122, 217
BseBI CCWGG 1 cut(s) 224
BseDI CCNNGG 1 cut(s) 130
BseMI GCAATG 3 cut(s) 12, 122, 217
BseNI ACTGG 1 cut(s) 107
BseSI GKGCMC 1 cut(s) 140
BseXI GCAGC 1 cut(s) 389
BshNI GGYRCC 1 cut(s) 137
BshTI ACCGGT 1 cut(s) 258
BsiSI CCGG 1 cut(s) 259
Bsp119I TTCGAA 1 cut(s) 251
Bsp1286I GDGCHC 1 cut(s) 140
Bsp143I GATC 2 cut(s) 75, 184
BspACI CCGC 1 cut(s) 141
BspLI GGNNCC 1 cut(s) 139
BspPI GGATC 1 cut(s) 83
BspT104I TTCGAA 1 cut(s) 251
BspT107I GGYRCC 1 cut(s) 137
BsrBI CCGCTC 1 cut(s) 143
BsrDI GCAATG 3 cut(s) 12, 122, 217
BsrFI RCCGGY 1 cut(s) 258
BsrI ACTGG 1 cut(s) 107
BssAI RCCGGY 1 cut(s) 258
BssECI CCNNGG 1 cut(s) 130
BssMI GATC 2 cut(s) 75, 184
BssT1I CCWWGG 1 cut(s) 130
Bst2UI CCWGG 1 cut(s) 224
Bst4CI ACNGT 2 cut(s) 86, 358
BstAPI GCANNNNNTGC 1 cut(s) 233
BstBI TTCGAA 1 cut(s) 251
BstKTI GATC 2 cut(s) 78, 187
BstMBI GATC 2 cut(s) 75, 184
BstMWI GCNNNNNNNGC 3 cut(s) 112, 149, 233
BstNI CCWGG 1 cut(s) 224
BstSCI CCNGG 1 cut(s) 222
BstSLI GKGCMC 1 cut(s) 140
BstV1I GCAGC 1 cut(s) 389
BstX2I RGATCY 1 cut(s) 75
BstYI RGATCY 1 cut(s) 75
BtgZI GCGATG 1 cut(s) 328
BtsIMutI CAGTG 1 cut(s) 354
Cfr10I RCCGGY 1 cut(s) 258
CspAI ACCGGT 1 cut(s) 258
CviAII CATG 1 cut(s) 192
CviJI RGCY 3 cut(s) 23, 106, 169
CviKI_1 RGCY 3 cut(s) 23, 106, 169
DpnI GATC 2 cut(s) 77, 186
DpnII GATC 2 cut(s) 75, 184
Eco130I CCWWGG 1 cut(s) 130
EcoRII CCWGG 1 cut(s) 222
EcoT14I CCWWGG 1 cut(s) 130
ErhI CCWWGG 1 cut(s) 130
FaeI CATG 1 cut(s) 195
FalI AAGNNNNNCTT 2 cut(s) 220, 252
FatI CATG 1 cut(s) 191
FauNDI CATATG 1 cut(s) 392
Fnu4HI GCNGC 1 cut(s) 378
Fsp4HI GCNGC 1 cut(s) 378
GluI GCNGC 1 cut(s) 378
HapII CCGG 1 cut(s) 259
Hin1II CATG 1 cut(s) 195
HpaII CCGG 1 cut(s) 259
HphI GGTGA 1 cut(s) 279
Hpy166II GTNNAC 1 cut(s) 354
Hpy188III TCNNGA 2 cut(s) 314, 364
Hpy8I GTNNAC 1 cut(s) 354
HpyCH4III ACNGT 2 cut(s) 86, 358
HpyCH4IV ACGT 1 cut(s) 328
HpyCH4V TGCA 3 cut(s) 4, 17, 115
HpyF10VI GCNNNNNNNGC 3 cut(s) 112, 149, 233
HpySE526I ACGT 1 cut(s) 328
Hsp92II CATG 1 cut(s) 195
Kzo9I GATC 2 cut(s) 75, 184
LpnPI CCDG 5 cut(s) 120, 209, 236, 272, 335
Lsp1109I GCAGC 1 cut(s) 389
LweI GCATC 1 cut(s) 223
MaeII ACGT 1 cut(s) 328
MaeIII GTNAC 1 cut(s) 99
MalI GATC 2 cut(s) 77, 186
MbiI CCGCTC 1 cut(s) 143
MboI GATC 2 cut(s) 75, 184
MboII GAAGA 1 cut(s) 70
MflI RGATCY 1 cut(s) 75
MhlI GDGCHC 1 cut(s) 140
MluCI AATT 1 cut(s) 253
MmeI TCCRAC 1 cut(s) 39
MspA1I CMGCKG 1 cut(s) 169
MspI CCGG 1 cut(s) 259
MspR9I CCNGG 1 cut(s) 224
MvaI CCWGG 1 cut(s) 224
MwoI GCNNNNNNNGC 3 cut(s) 112, 149, 233
NdeI CATATG 1 cut(s) 392
NdeII GATC 2 cut(s) 75, 184
NlaIII CATG 1 cut(s) 195
NlaIV GGNNCC 1 cut(s) 139
NmeAIII GCCGAG 1 cut(s) 373
NmuCI GTSAC 1 cut(s) 99
NspV TTCGAA 1 cut(s) 251
PinAI ACCGGT 1 cut(s) 258
PkrI GCNGC 1 cut(s) 379
Psp6I CCWGG 1 cut(s) 222
PspGI CCWGG 1 cut(s) 222
PspN4I GGNNCC 1 cut(s) 139
PsuI RGATCY 1 cut(s) 75
PvuII CAGCTG 1 cut(s) 169
SatI GCNGC 1 cut(s) 378
Sau3AI GATC 2 cut(s) 75, 184
ScrFI CCNGG 1 cut(s) 224
SduI GDGCHC 1 cut(s) 140
SetI ASST 5 cut(s) 25, 132, 171, 324, 331
SfaNI GCATC 1 cut(s) 223
SfuI TTCGAA 1 cut(s) 251
Sse9I AATT 1 cut(s) 253
SsiI CCGC 1 cut(s) 141
StyD4I CCNGG 1 cut(s) 222
StyI CCWWGG 1 cut(s) 130
TaaI ACNGT 2 cut(s) 86, 358
TaiI ACGT 1 cut(s) 331
TaqI TCGA 3 cut(s) 251, 313, 363
TasI AATT 1 cut(s) 253
TscAI CASTG 1 cut(s) 361
TseFI GTSAC 1 cut(s) 99
TseI GCWGC 1 cut(s) 377
Tsp45I GTSAC 1 cut(s) 99
TspDTI ATGAA 3 cut(s) 29, 180, 325
TspRI CASTG 1 cut(s) 361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.