Rh7BG280200

ADP binding

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
N/A
Physical Location & Seq
Forward (+)
26067838 .. 26080078
12241 bp
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UTR
Exon/CDS
Intron
Rh7BG280200.1

Sequence Viewer

Length: 216 bp
ATGGGAGAGACGTGGGAAGTTGAGGGACTATTTGTAGCAGACTCGAGTGTTTTCCCAACGGTTTTGGGAGTCAATCCTATGGTTACTGTTCAGTGTATTGCTTACTGCACTGCGCAATCTGTTATTCAAGTGCTTCAGAGCTGCGGATGTATAAATTCTGGGGTGGTTCAGGAACTTTTGTTTTGTTCGGCTTTCACTGAACCAAAATTAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

71

Amino Acids

7.6

Weight (kDa)

4.05

Isoelectric Point (pI)

41.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_C PF05199 2 - 34 2.8e-08 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 114
AciI CCGC 1 cut(s) 144
AcsI RAATTY 1 cut(s) 154
AcuI CTGAAG 1 cut(s) 119
AgsI TTSAA 1 cut(s) 128
AjiI CACGTC 1 cut(s) 12
AluBI AGCT 1 cut(s) 141
AluI AGCT 1 cut(s) 141
Alw26I GTCTC 1 cut(s) 2
Ama87I CYCGRG 1 cut(s) 43
ApeKI GCWGC 1 cut(s) 141
ApoI RAATTY 1 cut(s) 154
AspLEI GCGC 1 cut(s) 115
AvaI CYCGRG 1 cut(s) 43
BbvI GCAGC 1 cut(s) 128
BcoDI GTCTC 1 cut(s) 2
BisI GCNGC 1 cut(s) 142
BlsI GCNGC 1 cut(s) 143
BmeT110I CYCGRG 1 cut(s) 43
BmgBI CACGTC 1 cut(s) 12
BseGI GGATG 1 cut(s) 152
BseXI GCAGC 1 cut(s) 128
BsgI GTGCAG 1 cut(s) 91
BsiHKCI CYCGRG 1 cut(s) 43
BslFI GGGAC 1 cut(s) 39
BsmAI GTCTC 1 cut(s) 2
BsmBI CGTCTC 1 cut(s) 2
BsmFI GGGAC 1 cut(s) 39
BsoBI CYCGRG 1 cut(s) 43
BspACI CCGC 1 cut(s) 144
Bst4CI ACNGT 2 cut(s) 61, 88
BstF5I GGATG 1 cut(s) 152
BstHHI GCGC 1 cut(s) 115
BstMAI GTCTC 1 cut(s) 2
BstV1I GCAGC 1 cut(s) 128
BtrI CACGTC 1 cut(s) 12
BtsCI GGATG 1 cut(s) 152
BtsI GCAGTG 1 cut(s) 108
BtsIMutI CAGTG 3 cut(s) 98, 108, 195
CfoI GCGC 1 cut(s) 115
CviJI RGCY 2 cut(s) 141, 191
CviKI_1 RGCY 2 cut(s) 141, 191
Eco57I CTGAAG 1 cut(s) 119
Eco88I CYCGRG 1 cut(s) 43
Esp3I CGTCTC 1 cut(s) 2
FaiI YATR 2 cut(s) 80, 152
FaqI GGGAC 1 cut(s) 39
Fnu4HI GCNGC 1 cut(s) 142
FokI GGATG 1 cut(s) 159
Fsp4HI GCNGC 1 cut(s) 142
FspI TGCGCA 1 cut(s) 114
GlaI GCGC 1 cut(s) 114
GluI GCNGC 1 cut(s) 142
HhaI GCGC 1 cut(s) 115
Hin6I GCGC 1 cut(s) 113
HinP1I GCGC 1 cut(s) 113
HinfI GANTC 2 cut(s) 41, 69
Hpy188I TCNGA 1 cut(s) 138
Hpy188III TCNNGA 1 cut(s) 170
HpyCH4III ACNGT 2 cut(s) 61, 88
HpyCH4IV ACGT 1 cut(s) 11
HpyCH4V TGCA 1 cut(s) 108
HpySE526I ACGT 1 cut(s) 11
HspAI GCGC 1 cut(s) 113
LpnPI CCDG 2 cut(s) 144, 155
Lsp1109I GCAGC 1 cut(s) 128
MaeII ACGT 1 cut(s) 11
MaeIII GTNAC 1 cut(s) 82
MluCI AATT 2 cut(s) 154, 206
MlyI GAGTC 2 cut(s) 35, 78
MnlI CCTC 1 cut(s) 16
MseI TTAA 1 cut(s) 209
NsbI TGCGCA 1 cut(s) 114
PaeR7I CTCGAG 1 cut(s) 43
PkrI GCNGC 1 cut(s) 143
PleI GAGTC 2 cut(s) 35, 77
PpsI GAGTC 2 cut(s) 35, 77
PspXI VCTCGAGB 1 cut(s) 43
SaqAI TTAA 1 cut(s) 209
SatI GCNGC 1 cut(s) 142
SchI GAGTC 2 cut(s) 35, 78
SetI ASST 2 cut(s) 14, 143
Sfr274I CTCGAG 1 cut(s) 43
SgeI CNNG 6 cut(s) 24, 55, 57, 140, 171, 182
SlaI CTCGAG 1 cut(s) 43
SmlI CTYRAG 1 cut(s) 43
SmoI CTYRAG 1 cut(s) 43
Sse9I AATT 2 cut(s) 154, 206
SsiI CCGC 1 cut(s) 144
TaaI ACNGT 2 cut(s) 61, 88
TaiI ACGT 1 cut(s) 14
TaqI TCGA 1 cut(s) 44
TasI AATT 2 cut(s) 154, 206
Tru1I TTAA 1 cut(s) 209
Tru9I TTAA 1 cut(s) 209
TscAI CASTG 3 cut(s) 98, 115, 202
TseI GCWGC 1 cut(s) 141
TspRI CASTG 3 cut(s) 98, 115, 202
XapI RAATTY 1 cut(s) 154
XhoI CTCGAG 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.