Rh7BG431400

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
N/A
Physical Location & Seq
Forward (+)
49342835 .. 49345129
2295 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG431400.1

Sequence Viewer

Length: 363 bp
ATGGTCAACCAAACTGGGTATGACAACTGCACCCTGGATAGTGCAGTAGGGAACTCGAGCAGTGGCAAGGACTTCATGCTCCGCAATGATTCCAAGAGATGCTACTTCATTTGTGGAAATGGCCAGTGCTTCAATGGGATGAAAGTCTCTGTTCTCGTCCATCCTCTGCCCACGCCAACAGCATTTACTGTGTCATGTGCACCTAGAATTTTACTACTGACACTGATACGTGTTAAATTGGAAAATCTCTTGCCCGTAAGTGTTGGGTATAGCCGTATAGGTCATGCGTCAACTCAGACCACAACACTGACAACAGCAAACATTTATACAAGATTACTCTGGCATGGGTTGAAGCGTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

120

Amino Acids

13.15

Weight (kDa)

9.5

Isoelectric Point (pI)

33.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 82
AcoI YGGCCR 1 cut(s) 121
AcsI RAATTY 1 cut(s) 207
AflIII ACRYGT 1 cut(s) 229
AgsI TTSAA 2 cut(s) 133, 352
AjnI CCWGG 1 cut(s) 33
Alw21I GWGCWC 1 cut(s) 202
Alw26I GTCTC 1 cut(s) 151
Alw44I GTGCAC 1 cut(s) 198
Ama87I CYCGRG 1 cut(s) 55
AoxI GGCC 1 cut(s) 121
ApaLI GTGCAC 1 cut(s) 198
ApoI RAATTY 1 cut(s) 207
AvaI CYCGRG 1 cut(s) 55
BaeGI GKGCMC 1 cut(s) 202
BalI TGGCCA 1 cut(s) 123
Bbv12I GWGCWC 1 cut(s) 202
BccI CCATC 1 cut(s) 168
BceAI ACGGC 1 cut(s) 258
BciT130I CCWGG 1 cut(s) 35
BcoDI GTCTC 1 cut(s) 151
BfaI CTAG 1 cut(s) 204
Bme1390I CCNGG 1 cut(s) 35
BmeT110I CYCGRG 1 cut(s) 55
BmrFI CCNGG 1 cut(s) 35
BmrI ACTGGG 1 cut(s) 24
BmsI GCATC 1 cut(s) 89
BmuI ACTGGG 1 cut(s) 24
BsaAI YACGTR 1 cut(s) 230
BsaJI CCNNGG 1 cut(s) 33
Bse1I ACTGG 2 cut(s) 19, 124
Bse3DI GCAATG 1 cut(s) 91
BseBI CCWGG 1 cut(s) 35
BseDI CCNNGG 1 cut(s) 33
BseGI GGATG 2 cut(s) 144, 160
BseMI GCAATG 1 cut(s) 91
BseMII CTCAG 1 cut(s) 308
BseNI ACTGG 2 cut(s) 19, 124
BseSI GKGCMC 1 cut(s) 202
BsgI GTGCAG 2 cut(s) 13, 63
BshFI GGCC 1 cut(s) 123
BsiHKAI GWGCWC 1 cut(s) 202
BsiHKCI CYCGRG 1 cut(s) 55
BsmAI GTCTC 1 cut(s) 151
BsnI GGCC 1 cut(s) 123
BsoBI CYCGRG 1 cut(s) 55
Bsp1286I GDGCHC 1 cut(s) 202
BspACI CCGC 1 cut(s) 82
BspANI GGCC 1 cut(s) 123
BspCNI CTCAG 1 cut(s) 307
BsrDI GCAATG 1 cut(s) 91
BsrI ACTGG 2 cut(s) 19, 124
BssECI CCNNGG 1 cut(s) 33
Bst2UI CCWGG 1 cut(s) 35
Bst4CI ACNGT 1 cut(s) 190
BstBAI YACGTR 1 cut(s) 230
BstC8I GCNNGC 1 cut(s) 357
BstDEI CTNAG 1 cut(s) 294
BstF5I GGATG 2 cut(s) 144, 160
BstMAI GTCTC 1 cut(s) 151
BstNI CCWGG 1 cut(s) 35
BstSCI CCNGG 1 cut(s) 33
BstSLI GKGCMC 1 cut(s) 202
BsuRI GGCC 1 cut(s) 123
BtsCI GGATG 2 cut(s) 144, 160
BtsI GCAGTG 1 cut(s) 67
BtsIMutI CAGTG 4 cut(s) 67, 131, 221, 305
Cac8I GCNNGC 1 cut(s) 357
CseI GACGC 1 cut(s) 276
CviAII CATG 4 cut(s) 76, 195, 284, 344
CviJI RGCY 2 cut(s) 123, 273
CviKI_1 RGCY 2 cut(s) 123, 273
DdeI CTNAG 1 cut(s) 294
EaeI YGGCCR 1 cut(s) 121
Eco88I CYCGRG 1 cut(s) 55
EcoRII CCWGG 1 cut(s) 33
FaeI CATG 4 cut(s) 79, 198, 287, 347
FaiI YATR 9 cut(s) 21, 77, 196, 270, 278, 285, 327, 345, 361
FatI CATG 4 cut(s) 75, 194, 283, 343
FokI GGATG 2 cut(s) 147, 151
FspBI CTAG 1 cut(s) 204
HaeIII GGCC 1 cut(s) 123
HgaI GACGC 1 cut(s) 276
Hin1II CATG 4 cut(s) 79, 198, 287, 347
HincII GTYRAC 2 cut(s) 7, 291
HindII GTYRAC 2 cut(s) 7, 291
HinfI GANTC 1 cut(s) 89
Hpy166II GTNNAC 3 cut(s) 7, 200, 291
Hpy188I TCNGA 1 cut(s) 297
Hpy8I GTNNAC 3 cut(s) 7, 200, 291
HpyCH4III ACNGT 1 cut(s) 190
HpyCH4IV ACGT 1 cut(s) 229
HpyCH4V TGCA 4 cut(s) 30, 44, 200, 359
HpyF3I CTNAG 1 cut(s) 294
HpySE526I ACGT 1 cut(s) 229
Hsp92II CATG 4 cut(s) 79, 198, 287, 347
LmnI GCTCC 1 cut(s) 84
LpnPI CCDG 4 cut(s) 20, 47, 137, 325
LweI GCATC 1 cut(s) 89
MaeI CTAG 1 cut(s) 204
MaeII ACGT 1 cut(s) 229
MhlI GDGCHC 1 cut(s) 202
MlsI TGGCCA 1 cut(s) 123
MluCI AATT 2 cut(s) 207, 236
MluNI TGGCCA 1 cut(s) 123
MnlI CCTC 1 cut(s) 174
Mox20I TGGCCA 1 cut(s) 123
MscI TGGCCA 1 cut(s) 123
MseI TTAA 1 cut(s) 234
Msp20I TGGCCA 1 cut(s) 123
MspR9I CCNGG 1 cut(s) 35
MvaI CCWGG 1 cut(s) 35
NlaIII CATG 4 cut(s) 79, 198, 287, 347
PaeR7I CTCGAG 1 cut(s) 55
PfeI GAWTC 1 cut(s) 89
Ppu21I YACGTR 1 cut(s) 230
Psp6I CCWGG 1 cut(s) 33
PspGI CCWGG 1 cut(s) 33
PspXI VCTCGAGB 1 cut(s) 55
SaqAI TTAA 1 cut(s) 234
ScrFI CCNGG 1 cut(s) 35
SduI GDGCHC 1 cut(s) 202
SetI ASST 3 cut(s) 205, 232, 283
SfaNI GCATC 1 cut(s) 89
Sfr274I CTCGAG 1 cut(s) 55
SlaI CTCGAG 1 cut(s) 55
SmlI CTYRAG 1 cut(s) 55
SmoI CTYRAG 1 cut(s) 55
Sse9I AATT 2 cut(s) 207, 236
SsiI CCGC 1 cut(s) 82
SspMI CTAG 1 cut(s) 204
StyD4I CCNGG 1 cut(s) 33
TaaI ACNGT 1 cut(s) 190
TaiI ACGT 1 cut(s) 232
TaqI TCGA 1 cut(s) 56
TasI AATT 2 cut(s) 207, 236
TfiI GAWTC 1 cut(s) 89
Tru1I TTAA 1 cut(s) 234
Tru9I TTAA 1 cut(s) 234
TscAI CASTG 4 cut(s) 67, 131, 228, 312
TspDTI ATGAA 3 cut(s) 64, 97, 155
TspRI CASTG 4 cut(s) 67, 131, 228, 312
VneI GTGCAC 1 cut(s) 198
XapI RAATTY 1 cut(s) 207
XcmI CCANNNNNNNNNTGG 1 cut(s) 131
XhoI CTCGAG 1 cut(s) 55
XspI CTAG 1 cut(s) 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.