Rh7CG026300
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
N/A
Physical Location & Seq
Forward (+)
1879009 .. 1879233
225 bp
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UTR
Exon/CDS
Intron
Rh7CG026300.1

Sequence Viewer

Length: 225 bp
ATGCAGATTGTGGATCCTACTCTTCTTGCCACTTTACAAGAGACAGCAGCTGCAACAAGAGGAAATGAAGTGACTACATCAGTGGTTACAACAATGAAAGTGAAGCAGAAGATAGAAGAAAACATAGACTATGAGAACCTAAGCAAGATGAACACATGTGCAGAAGTGCATAATTCCAATCGTGAAAGCAGGACTTGCATGCTCGGAAGAATCACCAAGGAATAA

Protein Analysis

74

Amino Acids

8.29

Weight (kDa)

5.8

Isoelectric Point (pI)

39.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 8, 21
AflIII ACRYGT 1 cut(s) 155
AluBI AGCT 1 cut(s) 50
AluI AGCT 1 cut(s) 50
Alw26I GTCTC 1 cut(s) 35
AlwI GGATC 2 cut(s) 8, 21
AlwNI CAGNNNCTG 1 cut(s) 50
ApeKI GCWGC 2 cut(s) 47, 50
AsuHPI GGTGA 1 cut(s) 205
BamHI GGATCC 1 cut(s) 13
BbvI GCAGC 2 cut(s) 37, 59
BcoDI GTCTC 1 cut(s) 35
BisI GCNGC 2 cut(s) 48, 51
BlsI GCNGC 2 cut(s) 49, 52
BmiI GGNNCC 1 cut(s) 15
Bpu10I CCTNAGC 1 cut(s) 140
BsaJI CCNNGG 1 cut(s) 216
BseDI CCNNGG 1 cut(s) 216
BseXI GCAGC 2 cut(s) 37, 59
BsgI GTGCAG 1 cut(s) 180
BsmAI GTCTC 1 cut(s) 35
Bsp143I GATC 1 cut(s) 13
BspLI GGNNCC 1 cut(s) 15
BspPI GGATC 2 cut(s) 8, 21
BssECI CCNNGG 1 cut(s) 216
BssMI GATC 1 cut(s) 13
BssT1I CCWWGG 1 cut(s) 216
Bst6I CTCTTC 1 cut(s) 27
BstAPI GCANNNNNTGC 1 cut(s) 195
BstC8I GCNNGC 1 cut(s) 200
BstDEI CTNAG 1 cut(s) 140
BstKTI GATC 1 cut(s) 16
BstMAI GTCTC 1 cut(s) 35
BstMBI GATC 1 cut(s) 13
BstMWI GCNNNNNNNGC 1 cut(s) 195
BstNSI RCATGY 2 cut(s) 159, 202
BstV1I GCAGC 2 cut(s) 37, 59
BstX2I RGATCY 1 cut(s) 13
BstYI RGATCY 1 cut(s) 13
BtsIMutI CAGTG 1 cut(s) 87
Cac8I GCNNGC 1 cut(s) 200
CaiI CAGNNNCTG 1 cut(s) 50
CviAII CATG 2 cut(s) 156, 199
CviJI RGCY 1 cut(s) 50
CviKI_1 RGCY 1 cut(s) 50
DdeI CTNAG 1 cut(s) 140
DpnI GATC 1 cut(s) 15
DpnII GATC 1 cut(s) 13
Eam1104I CTCTTC 1 cut(s) 27
EarI CTCTTC 1 cut(s) 27
Eco130I CCWWGG 1 cut(s) 216
EcoT14I CCWWGG 1 cut(s) 216
ErhI CCWWGG 1 cut(s) 216
FaeI CATG 2 cut(s) 159, 202
FaiI YATR 5 cut(s) 125, 132, 157, 171, 200
FalI AAGNNNNNCTT 2 cut(s) 178, 210
FatI CATG 2 cut(s) 155, 198
Fnu4HI GCNGC 2 cut(s) 48, 51
Fsp4HI GCNGC 2 cut(s) 48, 51
FspEI CC 9 cut(s) 30, 43, 45, 68, 152, 175, 189, 190, 203
GluI GCNGC 2 cut(s) 48, 51
Hin1II CATG 2 cut(s) 159, 202
HinfI GANTC 1 cut(s) 210
HphI GGTGA 1 cut(s) 205
Hpy188I TCNGA 1 cut(s) 206
Hpy188III TCNNGA 1 cut(s) 182
HpyCH4V TGCA 5 cut(s) 4, 53, 161, 169, 198
HpyF10VI GCNNNNNNNGC 1 cut(s) 195
HpyF3I CTNAG 1 cut(s) 140
Hsp92II CATG 2 cut(s) 159, 202
Kzo9I GATC 1 cut(s) 13
LpnPI CCDG 1 cut(s) 175
Lsp1109I GCAGC 2 cut(s) 37, 59
MaeIII GTNAC 2 cut(s) 70, 85
MalI GATC 1 cut(s) 15
MboI GATC 1 cut(s) 13
MboII GAAGA 4 cut(s) 14, 121, 128, 219
MflI RGATCY 1 cut(s) 13
MluCI AATT 1 cut(s) 172
MnlI CCTC 1 cut(s) 53
MspA1I CMGCKG 1 cut(s) 50
MwoI GCNNNNNNNGC 1 cut(s) 195
NdeII GATC 1 cut(s) 13
NlaIII CATG 2 cut(s) 159, 202
NlaIV GGNNCC 1 cut(s) 15
NmuCI GTSAC 1 cut(s) 70
NspI RCATGY 2 cut(s) 159, 202
PaeI GCATGC 1 cut(s) 202
PciI ACATGT 1 cut(s) 155
PfeI GAWTC 1 cut(s) 210
PkrI GCNGC 2 cut(s) 49, 52
PscI ACATGT 1 cut(s) 155
PspN4I GGNNCC 1 cut(s) 15
PstNI CAGNNNCTG 1 cut(s) 50
PsuI RGATCY 1 cut(s) 13
PvuII CAGCTG 1 cut(s) 50
SatI GCNGC 2 cut(s) 48, 51
Sau3AI GATC 1 cut(s) 13
SetI ASST 2 cut(s) 52, 141
SphI GCATGC 1 cut(s) 202
Sse9I AATT 1 cut(s) 172
StyI CCWWGG 1 cut(s) 216
TasI AATT 1 cut(s) 172
TfiI GAWTC 1 cut(s) 210
TscAI CASTG 1 cut(s) 87
TseFI GTSAC 1 cut(s) 70
TseI GCWGC 2 cut(s) 47, 50
Tsp45I GTSAC 1 cut(s) 70
TspDTI ATGAA 3 cut(s) 81, 110, 164
TspRI CASTG 1 cut(s) 87
XceI RCATGY 2 cut(s) 159, 202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.