Rh7CG187800

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
N/A
Physical Location & Seq
Reverse (-)
16541163 .. 16542521
1359 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG187800.1

Sequence Viewer

Length: 732 bp
ATGCTTTGTGTTGATCCTTCCAGGAGGCTCACAGCTGCTCAGGTTCTAGCTCACCCATGGATGGAAGACTGTGCGCAAGCACATGAAGAACTGTACAACCAAAACACCCGCATCTTCAGACAGCTGCAACTGGATGAAGATTCATTCTCTCCTGCATCCGTTGACAGGAATCAGGACTTTAGCTTCGGTGAGGGTTCACCAACAACTGCTGATGGGAAACTGTGGCACTCACCTGCATTCACATGCAAATCATCTTTCTCCTCTTTCCTAGATGAGAACGGTACTCCTTGCCCTGCATCTGGAGGCTTTTCTTTCAGCAGCTGTGCTTATGAATCAAGTGCAACTGAGTTTTCTTCACCAGTTCCATCAATGCCTAGCTTTACCTTCTTCAGACTAAGTTCTGCAGAAGCGCAAGGAAACATTCCATTGAGATTTAAAGCTAAAATGTCTACTTTGGATCCAATTTGTGGAGAGTCAAATGTGGAGAAGCTACTTGAGCTGGAATGCTCACCAGCTAAGTGTGATGATGGAGAACTAGAACGCAAAGAGTTTCGGAGAGGTGGAACAAATGGGCTGTCTAGGGTTGCCGGAATTCACAGCAAAAGGAATCATACAATTGGACTTGGTGAGCTTGATCAGCTAAATCTCATTGTAACCGAATCAGTTATTCGTTGGGCATCATGCACTCATATTCCAACAGTCCCATCTCTTAGATTGTCACTTGTCTGCTAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

243

Amino Acids

26.68

Weight (kDa)

5.28

Isoelectric Point (pI)

62.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 241
Acc16I TGCGCA 1 cut(s) 75
Acc36I ACCTGC 1 cut(s) 241
AccB7I CCANNNNNTGG 1 cut(s) 467
AccI GTMKAC 1 cut(s) 449
AciI CCGC 1 cut(s) 109
AclWI GGATC 3 cut(s) 8, 452, 465
AcsI RAATTY 1 cut(s) 591
AcuI CTGAAG 2 cut(s) 100, 373
AfaI GTAC 2 cut(s) 95, 283
AfiI CCNNNNNNNGG 4 cut(s) 61, 165, 299, 467
AjnI CCWGG 1 cut(s) 20
AlwI GGATC 3 cut(s) 8, 452, 465
AlwNI CAGNNNCTG 1 cut(s) 321
ApeKI GCWGC 3 cut(s) 35, 124, 318
ApoI RAATTY 1 cut(s) 591
ArsI GACNNNNNNTTYG 4 cut(s) 167, 199, 560, 592
AspLEI GCGC 2 cut(s) 76, 412
AsuHPI GGTGA 7 cut(s) 44, 189, 200, 222, 348, 501, 638
BamHI GGATCC 1 cut(s) 457
BbsI GAAGAC 1 cut(s) 72
BbvI GCAGC 3 cut(s) 22, 111, 330
BccI CCATC 5 cut(s) 55, 206, 373, 521, 712
BciT130I CCWGG 1 cut(s) 22
BclI TGATCA 1 cut(s) 634
BfaI CTAG 6 cut(s) 47, 269, 375, 536, 579, 730
BfmI CTRYAG 1 cut(s) 402
BfuAI ACCTGC 1 cut(s) 241
BisI GCNGC 3 cut(s) 36, 125, 319
BlsI GCNGC 3 cut(s) 37, 126, 320
Bme1390I CCNGG 1 cut(s) 22
BmiI GGNNCC 1 cut(s) 459
BmrFI CCNGG 1 cut(s) 22
BmsI GCATC 4 cut(s) 120, 164, 305, 686
BpiI GAAGAC 1 cut(s) 72
BpmI CTGGAG 1 cut(s) 321
Bpu10I CCTNAGC 1 cut(s) 39
BpuEI CTTGAG 1 cut(s) 515
BsaJI CCNNGG 1 cut(s) 56
Bsc4I CCNNNNNNNGG 4 cut(s) 61, 165, 299, 467
Bse1I ACTGG 2 cut(s) 135, 359
BseBI CCWGG 1 cut(s) 22
BseDI CCNNGG 1 cut(s) 56
BseGI GGATG 3 cut(s) 66, 139, 155
BseLI CCNNNNNNNGG 4 cut(s) 61, 165, 299, 467
BseMII CTCAG 2 cut(s) 53, 336
BseNI ACTGG 2 cut(s) 135, 359
BseRI GAGGAG 1 cut(s) 250
BseXI GCAGC 3 cut(s) 22, 111, 330
BsiSI CCGG 1 cut(s) 588
BslFI GGGAC 1 cut(s) 686
BslI CCNNNNNNNGG 4 cut(s) 61, 165, 299, 467
BsmFI GGGAC 1 cut(s) 686
BsmI GAATGC 2 cut(s) 236, 509
Bsp1407I TGTACA 1 cut(s) 93
Bsp143I GATC 3 cut(s) 13, 457, 634
Bsp19I CCATGG 1 cut(s) 56
BspACI CCGC 1 cut(s) 109
BspCNI CTCAG 2 cut(s) 52, 337
BspLI GGNNCC 1 cut(s) 459
BspMAI CTGCAG 1 cut(s) 406
BspMI ACCTGC 1 cut(s) 241
BspPI GGATC 3 cut(s) 8, 452, 465
BsrGI TGTACA 1 cut(s) 93
BsrI ACTGG 2 cut(s) 135, 359
BssECI CCNNGG 1 cut(s) 56
BssMI GATC 3 cut(s) 13, 457, 634
BssT1I CCWWGG 1 cut(s) 56
Bst2UI CCWGG 1 cut(s) 22
Bst4CI ACNGT 5 cut(s) 71, 93, 222, 281, 700
BstAUI TGTACA 1 cut(s) 93
BstC8I GCNNGC 1 cut(s) 78
BstDEI CTNAG 5 cut(s) 39, 345, 395, 516, 710
BstDSI CCRYGG 1 cut(s) 56
BstF5I GGATG 3 cut(s) 66, 139, 155
BstHHI GCGC 2 cut(s) 76, 412
BstKTI GATC 3 cut(s) 16, 460, 637
BstMBI GATC 3 cut(s) 13, 457, 634
BstMWI GCNNNNNNNGC 2 cut(s) 496, 637
BstNI CCWGG 1 cut(s) 22
BstNSI RCATGY 1 cut(s) 246
BstSCI CCNGG 1 cut(s) 20
BstSFI CTRYAG 1 cut(s) 402
BstV1I GCAGC 3 cut(s) 22, 111, 330
BstV2I GAAGAC 1 cut(s) 72
BstX2I RGATCY 1 cut(s) 457
BstYI RGATCY 1 cut(s) 457
BtgI CCRYGG 1 cut(s) 56
BtsCI GGATG 3 cut(s) 66, 139, 155
BveI ACCTGC 1 cut(s) 241
Cac8I GCNNGC 1 cut(s) 78
CaiI CAGNNNCTG 1 cut(s) 321
CfoI GCGC 2 cut(s) 76, 412
Csp6I GTAC 2 cut(s) 94, 282
CviAII CATG 4 cut(s) 57, 83, 243, 681
CviQI GTAC 2 cut(s) 94, 282
DdeI CTNAG 5 cut(s) 39, 345, 395, 516, 710
DpnI GATC 3 cut(s) 15, 459, 636
DpnII GATC 3 cut(s) 13, 457, 634
DraI TTTAAA 1 cut(s) 436
Eco130I CCWWGG 1 cut(s) 56
Eco57I CTGAAG 2 cut(s) 100, 373
EcoRI GAATTC 1 cut(s) 591
EcoRII CCWGG 1 cut(s) 20
EcoT14I CCWWGG 1 cut(s) 56
ErhI CCWWGG 1 cut(s) 56
FaeI CATG 4 cut(s) 60, 86, 246, 684
FaiI YATR 7 cut(s) 58, 84, 244, 330, 612, 682, 690
FaqI GGGAC 1 cut(s) 686
FatI CATG 4 cut(s) 56, 82, 242, 680
FauI CCCGC 1 cut(s) 116
FbaI TGATCA 1 cut(s) 634
FblI GTMKAC 1 cut(s) 449
Fnu4HI GCNGC 3 cut(s) 36, 125, 319
FokI GGATG 3 cut(s) 73, 142, 146
Fsp4HI GCNGC 3 cut(s) 36, 125, 319
FspBI CTAG 6 cut(s) 47, 269, 375, 536, 579, 730
FspI TGCGCA 1 cut(s) 75
GlaI GCGC 2 cut(s) 75, 411
GluI GCNGC 3 cut(s) 36, 125, 319
GsuI CTGGAG 1 cut(s) 321
HapII CCGG 1 cut(s) 588
HhaI GCGC 2 cut(s) 76, 412
Hin1II CATG 4 cut(s) 60, 86, 246, 684
Hin6I GCGC 2 cut(s) 74, 410
HinP1I GCGC 2 cut(s) 74, 410
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HinfI GANTC 6 cut(s) 140, 169, 332, 473, 607, 659
HpaII CCGG 1 cut(s) 588
HphI GGTGA 7 cut(s) 44, 189, 200, 222, 348, 501, 638
Hpy166II GTNNAC 3 cut(s) 163, 197, 450
Hpy188I TCNGA 3 cut(s) 119, 392, 555
Hpy188III TCNNGA 2 cut(s) 173, 300
Hpy8I GTNNAC 3 cut(s) 163, 197, 450
HpyAV CCTTC 2 cut(s) 27, 394
HpyCH4III ACNGT 5 cut(s) 71, 93, 222, 281, 700
HpyCH4V TGCA 8 cut(s) 127, 155, 236, 246, 296, 341, 404, 684
HpyF10VI GCNNNNNNNGC 2 cut(s) 496, 637
HpyF3I CTNAG 5 cut(s) 39, 345, 395, 516, 710
Hsp92II CATG 4 cut(s) 60, 86, 246, 684
HspAI GCGC 2 cut(s) 74, 410
Ksp22I TGATCA 1 cut(s) 634
Kzo9I GATC 3 cut(s) 13, 457, 634
Lsp1109I GCAGC 3 cut(s) 22, 111, 330
LweI GCATC 4 cut(s) 120, 164, 305, 686
MaeI CTAG 6 cut(s) 47, 269, 375, 536, 579, 730
MaeIII GTNAC 2 cut(s) 652, 717
MalI GATC 3 cut(s) 15, 459, 636
MboI GATC 3 cut(s) 13, 457, 634
MboII GAAGA 6 cut(s) 77, 98, 106, 149, 345, 379
MfeI CAATTG 1 cut(s) 615
MflI RGATCY 1 cut(s) 457
MluCI AATT 3 cut(s) 462, 591, 615
MlyI GAGTC 1 cut(s) 482
MmeI TCCRAC 1 cut(s) 719
MnlI CCTC 5 cut(s) 18, 184, 271, 296, 551
MseI TTAA 1 cut(s) 435
MslI CAYNNNNRTG 1 cut(s) 241
MspA1I CMGCKG 3 cut(s) 35, 124, 321
MspI CCGG 1 cut(s) 588
MspR9I CCNGG 1 cut(s) 22
MunI CAATTG 1 cut(s) 615
Mva1269I GAATGC 2 cut(s) 236, 509
MvaI CCWGG 1 cut(s) 22
MwoI GCNNNNNNNGC 2 cut(s) 496, 637
NcoI CCATGG 1 cut(s) 56
NdeII GATC 3 cut(s) 13, 457, 634
NlaIII CATG 4 cut(s) 60, 86, 246, 684
NlaIV GGNNCC 1 cut(s) 459
NmuCI GTSAC 1 cut(s) 717
NsbI TGCGCA 1 cut(s) 75
NspI RCATGY 1 cut(s) 246
PaqCI CACCTGC 1 cut(s) 241
PctI GAATGC 2 cut(s) 236, 509
PfeI GAWTC 5 cut(s) 140, 169, 332, 607, 659
PflMI CCANNNNNTGG 1 cut(s) 467
PfoI TCCNGGA 1 cut(s) 20
PkrI GCNGC 3 cut(s) 37, 126, 320
PleI GAGTC 1 cut(s) 481
PpsI GAGTC 1 cut(s) 481
Psp6I CCWGG 1 cut(s) 20
PspGI CCWGG 1 cut(s) 20
PspN4I GGNNCC 1 cut(s) 459
PstI CTGCAG 1 cut(s) 406
PstNI CAGNNNCTG 1 cut(s) 321
PsuI RGATCY 1 cut(s) 457
PvuII CAGCTG 3 cut(s) 35, 124, 321
RsaI GTAC 2 cut(s) 95, 283
RsaNI GTAC 2 cut(s) 94, 282
RseI CAYNNNNRTG 1 cut(s) 241
SaqAI TTAA 1 cut(s) 435
SatI GCNGC 3 cut(s) 36, 125, 319
Sau3AI GATC 3 cut(s) 13, 457, 634
SchI GAGTC 1 cut(s) 482
ScrFI CCNGG 1 cut(s) 22
SfaNI GCATC 4 cut(s) 120, 164, 305, 686
SfcI CTRYAG 1 cut(s) 402
SmiMI CAYNNNNRTG 1 cut(s) 241
SmlI CTYRAG 1 cut(s) 494
SmoI CTYRAG 1 cut(s) 494
Sse9I AATT 3 cut(s) 462, 591, 615
SsiI CCGC 1 cut(s) 109
SspMI CTAG 6 cut(s) 47, 269, 375, 536, 579, 730
StyD4I CCNGG 1 cut(s) 20
StyI CCWWGG 1 cut(s) 56
TaaI ACNGT 5 cut(s) 71, 93, 222, 281, 700
TasI AATT 3 cut(s) 462, 591, 615
TatI WGTACW 1 cut(s) 93
TfiI GAWTC 5 cut(s) 140, 169, 332, 607, 659
Tru1I TTAA 1 cut(s) 435
Tru9I TTAA 1 cut(s) 435
TseFI GTSAC 1 cut(s) 717
TseI GCWGC 3 cut(s) 35, 124, 318
Tsp45I GTSAC 1 cut(s) 717
TspDTI ATGAA 4 cut(s) 99, 132, 150, 345
TspGWI ACGGA 1 cut(s) 148
Van91I CCANNNNNTGG 1 cut(s) 467
XapI RAATTY 1 cut(s) 591
XceI RCATGY 1 cut(s) 246
XmiI GTMKAC 1 cut(s) 449
XspI CTAG 6 cut(s) 47, 269, 375, 536, 579, 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.