Rh7CG187900

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
N/A
Physical Location & Seq
Reverse (-)
16542874 .. 16543467
594 bp
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UTR
Exon/CDS
Intron
Rh7CG187900.1

Sequence Viewer

Length: 594 bp
ATGGAAATAGCCAACAAAATCGACATTAGGCAGCCTTCAATTCGAGTCTACAGTTGTTACAGAGTGGCAAGCCATTTTGACACTATTCTTGAAGCAACCCAAGTGGGAAATTTGAAAGACCAGTATATTCTGGGTGAGCAATTGGGATGGGGGCAGTTTGGTGTCATAAGAGCATGTTCGGTTAAGCTCACAGGTGAGGTTTTGGCTTGTAAGTCTATTGCCAAAGATAGATTGGTCACGCATGATGATGCGCGCAGCATCAAGCTCGAAATTGAAATAATGTCTAGGTTGTCTGGACATCCGAATGTTGTGAGTCTCAAGGCAGTTTATGAGGATGAACATTATGTGCATTTGTTGATGGAATTATGTGCTGGAAGGGAGCTTTTTCACCGGCTCGAGAAGCAAGGCAGATACTCGGAAACTGATGCTCGGGTTCTTTTTAGGCATCTGATGCATGTTGTTAAGTATTGTCATGAGAAGGGTGTTGTTCATAGAGATTTGAAGCCGGAAAACATTCTTTTGGCCACAAAATCTTCATCCTCACCAATTAAGTTGGCAGATTTTGGTCTTGCAACCTACATTAAACCCGGTTAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

197

Amino Acids

22.35

Weight (kDa)

8.55

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 43 - 195 2e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 44 - 194 8.6e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 48
AccII CGCG 1 cut(s) 253
AcoI YGGCCR 1 cut(s) 522
AcsI RAATTY 1 cut(s) 109
AgsI TTSAA 5 cut(s) 39, 92, 115, 275, 502
AluBI AGCT 3 cut(s) 187, 265, 382
AluI AGCT 3 cut(s) 187, 265, 382
Alw26I GTCTC 1 cut(s) 320
Ama87I CYCGRG 2 cut(s) 395, 429
AoxI GGCC 1 cut(s) 522
ApeKI GCWGC 2 cut(s) 31, 255
ApoI RAATTY 1 cut(s) 109
Asp700I GAANNNNTTC 1 cut(s) 513
AspLEI GCGC 2 cut(s) 253, 255
AsuC2I CCSGG 1 cut(s) 588
AsuHPI GGTGA 4 cut(s) 146, 206, 380, 534
AvaI CYCGRG 2 cut(s) 395, 429
BalI TGGCCA 1 cut(s) 524
BbvI GCAGC 2 cut(s) 43, 267
BccI CCATC 2 cut(s) 141, 352
BcgI CGANNNNNNTGC 2 cut(s) 247, 281
BcnI CCSGG 1 cut(s) 588
BcoDI GTCTC 1 cut(s) 320
BfaI CTAG 1 cut(s) 285
BfmI CTRYAG 1 cut(s) 49
BisI GCNGC 2 cut(s) 32, 256
BlsI GCNGC 2 cut(s) 33, 257
Bme1390I CCNGG 1 cut(s) 588
BmeT110I CYCGRG 2 cut(s) 395, 429
BmrFI CCNGG 1 cut(s) 588
BmsI GCATC 5 cut(s) 238, 267, 415, 441, 454
BpuEI CTTGAG 1 cut(s) 302
BpuMI CCSGG 1 cut(s) 588
Bse118I RCCGGY 1 cut(s) 390
Bse1I ACTGG 1 cut(s) 121
BseGI GGATG 4 cut(s) 152, 298, 340, 536
BseNI ACTGG 1 cut(s) 121
BsePI GCGCGC 1 cut(s) 251
BseXI GCAGC 2 cut(s) 43, 267
Bsh1236I CGCG 1 cut(s) 253
BshFI GGCC 1 cut(s) 524
BsiHKCI CYCGRG 2 cut(s) 395, 429
BsiSI CCGG 3 cut(s) 391, 506, 588
BsmAI GTCTC 1 cut(s) 320
BsnI GGCC 1 cut(s) 524
BsoBI CYCGRG 2 cut(s) 395, 429
BspANI GGCC 1 cut(s) 524
BspFNI CGCG 1 cut(s) 253
BspHI TCATGA 1 cut(s) 472
BsrFI RCCGGY 1 cut(s) 390
BsrI ACTGG 1 cut(s) 121
BssAI RCCGGY 1 cut(s) 390
BssHII GCGCGC 1 cut(s) 251
Bst4CI ACNGT 1 cut(s) 53
BstAPI GCANNNNNTGC 1 cut(s) 451
BstC8I GCNNGC 2 cut(s) 70, 253
BstF5I GGATG 4 cut(s) 152, 298, 340, 536
BstFNI CGCG 1 cut(s) 253
BstHHI GCGC 2 cut(s) 253, 255
BstMAI GTCTC 1 cut(s) 320
BstMWI GCNNNNNNNGC 2 cut(s) 400, 451
BstNSI RCATGY 2 cut(s) 177, 458
BstSCI CCNGG 1 cut(s) 586
BstSFI CTRYAG 1 cut(s) 49
BstUI CGCG 1 cut(s) 253
BstV1I GCAGC 2 cut(s) 43, 267
BsuRI GGCC 1 cut(s) 524
BtsCI GGATG 4 cut(s) 152, 298, 340, 536
Cac8I GCNNGC 2 cut(s) 70, 253
CciI TCATGA 1 cut(s) 472
CfoI GCGC 2 cut(s) 253, 255
Cfr10I RCCGGY 1 cut(s) 390
CspCI CAANNNNNGTGG 2 cut(s) 84, 119
CviAII CATG 4 cut(s) 174, 242, 455, 473
EaeI YGGCCR 1 cut(s) 522
Eco88I CYCGRG 2 cut(s) 395, 429
EcoT22I ATGCAT 1 cut(s) 456
FaeI CATG 4 cut(s) 177, 245, 458, 476
FatI CATG 4 cut(s) 173, 241, 454, 472
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 2 cut(s) 32, 256
FokI GGATG 4 cut(s) 159, 285, 347, 523
Fsp4HI GCNGC 2 cut(s) 32, 256
FspBI CTAG 1 cut(s) 285
GlaI GCGC 2 cut(s) 252, 254
GluI GCNGC 2 cut(s) 32, 256
HaeIII GGCC 1 cut(s) 524
HapII CCGG 3 cut(s) 391, 506, 588
HhaI GCGC 2 cut(s) 253, 255
Hin1II CATG 4 cut(s) 177, 245, 458, 476
Hin6I GCGC 2 cut(s) 251, 253
HinP1I GCGC 2 cut(s) 251, 253
HinfI GANTC 2 cut(s) 45, 313
HpaII CCGG 3 cut(s) 391, 506, 588
HphI GGTGA 4 cut(s) 146, 206, 380, 534
Hpy166II GTNNAC 1 cut(s) 49
Hpy188I TCNGA 3 cut(s) 303, 418, 450
Hpy188III TCNNGA 4 cut(s) 89, 294, 397, 473
Hpy8I GTNNAC 1 cut(s) 49
HpyAV CCTTC 3 cut(s) 45, 369, 472
HpyCH4III ACNGT 1 cut(s) 53
HpyCH4V TGCA 3 cut(s) 349, 454, 572
HpyF10VI GCNNNNNNNGC 2 cut(s) 400, 451
Hsp92II CATG 4 cut(s) 177, 245, 458, 476
HspAI GCGC 2 cut(s) 251, 253
LmnI GCTCC 1 cut(s) 379
LpnPI CCDG 7 cut(s) 116, 134, 177, 279, 357, 404, 519
Lsp1109I GCAGC 2 cut(s) 43, 267
LweI GCATC 5 cut(s) 238, 267, 415, 441, 454
MaeI CTAG 1 cut(s) 285
MaeIII GTNAC 2 cut(s) 56, 235
MboII GAAGA 1 cut(s) 525
MfeI CAATTG 1 cut(s) 140
MlsI TGGCCA 1 cut(s) 524
MluCI AATT 6 cut(s) 39, 109, 140, 270, 362, 546
MluNI TGGCCA 1 cut(s) 524
MlyI GAGTC 2 cut(s) 54, 322
MnlI CCTC 3 cut(s) 190, 325, 550
Mox20I TGGCCA 1 cut(s) 524
Mph1103I ATGCAT 1 cut(s) 456
MroXI GAANNNNTTC 1 cut(s) 513
MscI TGGCCA 1 cut(s) 524
MseI TTAA 4 cut(s) 183, 462, 549, 582
MslI CAYNNNNRTG 2 cut(s) 246, 303
Msp20I TGGCCA 1 cut(s) 524
MspI CCGG 3 cut(s) 391, 506, 588
MspR9I CCNGG 1 cut(s) 588
MunI CAATTG 1 cut(s) 140
MvnI CGCG 1 cut(s) 253
MwoI GCNNNNNNNGC 2 cut(s) 400, 451
NciI CCSGG 1 cut(s) 588
NlaIII CATG 4 cut(s) 177, 245, 458, 476
NmuCI GTSAC 1 cut(s) 235
NsiI ATGCAT 1 cut(s) 456
NspI RCATGY 2 cut(s) 177, 458
PaeR7I CTCGAG 1 cut(s) 395
PagI TCATGA 1 cut(s) 472
PauI GCGCGC 1 cut(s) 251
PdmI GAANNNNTTC 1 cut(s) 513
PkrI GCNGC 2 cut(s) 33, 257
PleI GAGTC 2 cut(s) 53, 321
PpsI GAGTC 2 cut(s) 53, 321
PteI GCGCGC 1 cut(s) 251
RseI CAYNNNNRTG 2 cut(s) 246, 303
SaqAI TTAA 4 cut(s) 183, 462, 549, 582
SatI GCNGC 2 cut(s) 32, 256
SchI GAGTC 2 cut(s) 54, 322
ScrFI CCNGG 1 cut(s) 588
SetI ASST 7 cut(s) 189, 196, 201, 267, 290, 384, 578
SfaNI GCATC 5 cut(s) 238, 267, 415, 441, 454
SfcI CTRYAG 1 cut(s) 49
Sfr274I CTCGAG 1 cut(s) 395
SlaI CTCGAG 1 cut(s) 395
SmiMI CAYNNNNRTG 2 cut(s) 246, 303
SmlI CTYRAG 2 cut(s) 317, 395
SmoI CTYRAG 2 cut(s) 317, 395
Sse9I AATT 6 cut(s) 39, 109, 140, 270, 362, 546
SspMI CTAG 1 cut(s) 285
StyD4I CCNGG 1 cut(s) 586
TaaI ACNGT 1 cut(s) 53
TaqI TCGA 4 cut(s) 21, 43, 267, 396
TasI AATT 6 cut(s) 39, 109, 140, 270, 362, 546
Tru1I TTAA 4 cut(s) 183, 462, 549, 582
Tru9I TTAA 4 cut(s) 183, 462, 549, 582
TseFI GTSAC 1 cut(s) 235
TseI GCWGC 2 cut(s) 31, 255
Tsp45I GTSAC 1 cut(s) 235
TspDTI ATGAA 3 cut(s) 351, 479, 525
XapI RAATTY 1 cut(s) 109
XceI RCATGY 2 cut(s) 177, 458
XcmI CCANNNNNNNNNTGG 1 cut(s) 229
XhoI CTCGAG 1 cut(s) 395
XmiI GTMKAC 1 cut(s) 48
XmnI GAANNNNTTC 1 cut(s) 513
XspI CTAG 1 cut(s) 285
Zsp2I ATGCAT 1 cut(s) 456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.