Rh7DG045700
NAC Family

NAC domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
N/A
Physical Location & Seq
Forward (+)
3489471 .. 3495596
6126 bp
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UTR
Exon/CDS
Intron
Rh7DG045700.1

Sequence Viewer

Length: 624 bp
ATGAAAAGGGAAGATTCTGAAGATCATAACCTTCCAGTCATTACCTCTAATGATTTCCAGACCATATTTCAGGACAACAAGCCCTGGCTAATTCAGGCCTTCCTTCTTTTGTCCCTTTTCCCCAGGGATGTAAAAGTGCCAAGTGCCTTATTAGGTGAGACTGTAGTTAGATATAAGACCCCTCTATTGATTCAGTTACAGACTGGTTTGCTTGCAACAACCATACTCGGTTCACCTATTCTTTACTACTCAAAGGAGTCGCTGAACAAATGGGTGATTTGTAGGGTCTTTGAAAAATCTGCTGGTGGTAAAAAAATCCATATCACTGGACTTGTGAATTTGGGTTCTCATGGAACTGAAATGCGTTCTTCTGGTTTACCACCATTGTTGGACACAGCGCCTTACAATGGTGCCAAGACCAGACCGGCTTCAGAGTCGAATTACGTGCCCTGCTTCTCCAACCATGAATCCATTGATTCTCAAAGAAACCAAGGGATTGTTGATTACATCAAAGGCAATCCTCTTTTCTCCGTTTCTTCGAATCCTTCAAACAACAACGCTTTCCCACGAGTCACGTTTCAGAATTCACTCTATTCTGCTCCTGTTTCATCAGGAAATTTCTAG

Protein Analysis

207

Amino Acids

22.88

Weight (kDa)

8.85

Isoelectric Point (pI)

42.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 410
AcsI RAATTY 3 cut(s) 337, 583, 616
AcuI CTGAAG 2 cut(s) 39, 414
AfiI CCNNNNNNNGG 1 cut(s) 407
AgsI TTSAA 2 cut(s) 293, 549
AjnI CCWGG 2 cut(s) 83, 122
Alw26I GTCTC 1 cut(s) 152
AoxI GGCC 1 cut(s) 96
ApoI RAATTY 3 cut(s) 337, 583, 616
AspLEI GCGC 1 cut(s) 400
AsuHPI GGTGA 3 cut(s) 167, 225, 286
AsuII TTCGAA 1 cut(s) 539
BaeGI GKGCMC 1 cut(s) 450
BanI GGYRCC 1 cut(s) 410
BauI CACGAG 1 cut(s) 567
BcgI CGANNNNNNTGC 2 cut(s) 427, 461
BciT130I CCWGG 2 cut(s) 85, 124
BcoDI GTCTC 1 cut(s) 152
BfaI CTAG 1 cut(s) 622
BfmI CTRYAG 1 cut(s) 162
BfoI RGCGCY 1 cut(s) 401
Bme1390I CCNGG 2 cut(s) 85, 124
BmiI GGNNCC 1 cut(s) 412
BmrFI CCNGG 2 cut(s) 85, 124
Bpu14I TTCGAA 1 cut(s) 539
BsaAI YACGTR 1 cut(s) 445
BsaJI CCNNGG 4 cut(s) 83, 122, 123, 490
Bsc4I CCNNNNNNNGG 1 cut(s) 407
Bse118I RCCGGY 1 cut(s) 424
Bse1I ACTGG 3 cut(s) 35, 208, 331
BseBI CCWGG 2 cut(s) 85, 124
BseDI CCNNGG 4 cut(s) 83, 122, 123, 490
BseGI GGATG 1 cut(s) 133
BseLI CCNNNNNNNGG 1 cut(s) 407
BseNI ACTGG 3 cut(s) 35, 208, 331
BseSI GKGCMC 1 cut(s) 450
BshFI GGCC 1 cut(s) 98
BshNI GGYRCC 1 cut(s) 410
BsiSI CCGG 1 cut(s) 425
BslFI GGGAC 1 cut(s) 97
BslI CCNNNNNNNGG 1 cut(s) 407
BsmAI GTCTC 1 cut(s) 152
BsmFI GGGAC 1 cut(s) 97
BsnI GGCC 1 cut(s) 98
Bsp119I TTCGAA 1 cut(s) 539
Bsp1286I GDGCHC 1 cut(s) 450
Bsp143I GATC 1 cut(s) 22
BspANI GGCC 1 cut(s) 98
BspLI GGNNCC 1 cut(s) 412
BspT104I TTCGAA 1 cut(s) 539
BspT107I GGYRCC 1 cut(s) 410
BsrFI RCCGGY 1 cut(s) 424
BsrI ACTGG 3 cut(s) 35, 208, 331
BssAI RCCGGY 1 cut(s) 424
BssECI CCNNGG 4 cut(s) 83, 122, 123, 490
BssMI GATC 1 cut(s) 22
BssSI CACGAG 1 cut(s) 567
BssT1I CCWWGG 1 cut(s) 490
Bst2BI CACGAG 1 cut(s) 567
Bst2UI CCWGG 2 cut(s) 85, 124
Bst4CI ACNGT 1 cut(s) 163
BstBAI YACGTR 1 cut(s) 445
BstBI TTCGAA 1 cut(s) 539
BstC8I GCNNGC 1 cut(s) 213
BstF5I GGATG 1 cut(s) 133
BstH2I RGCGCY 1 cut(s) 401
BstHHI GCGC 1 cut(s) 400
BstKTI GATC 1 cut(s) 25
BstMAI GTCTC 1 cut(s) 152
BstMBI GATC 1 cut(s) 22
BstNI CCWGG 2 cut(s) 85, 124
BstSCI CCNGG 2 cut(s) 83, 122
BstSFI CTRYAG 1 cut(s) 162
BstSLI GKGCMC 1 cut(s) 450
BstXI CCANNNNNNTGG 1 cut(s) 326
BsuRI GGCC 1 cut(s) 98
BtsCI GGATG 1 cut(s) 133
BtsIMutI CAGTG 1 cut(s) 324
Cac8I GCNNGC 1 cut(s) 213
CfoI GCGC 1 cut(s) 400
Cfr10I RCCGGY 1 cut(s) 424
CspCI CAANNNNNGTGG 2 cut(s) 369, 404
CviAII CATG 2 cut(s) 350, 464
CviJI RGCY 4 cut(s) 82, 88, 98, 428
CviKI_1 RGCY 4 cut(s) 82, 88, 98, 428
DpnI GATC 1 cut(s) 24
DpnII GATC 1 cut(s) 22
Eco130I CCWWGG 1 cut(s) 490
Eco147I AGGCCT 1 cut(s) 98
Eco57I CTGAAG 2 cut(s) 39, 414
EcoRI GAATTC 1 cut(s) 583
EcoRII CCWGG 2 cut(s) 83, 122
EcoT14I CCWWGG 1 cut(s) 490
ErhI CCWWGG 1 cut(s) 490
FaeI CATG 2 cut(s) 353, 467
FaiI YATR 7 cut(s) 27, 65, 174, 224, 321, 351, 465
FaqI GGGAC 1 cut(s) 97
FatI CATG 2 cut(s) 349, 463
FokI GGATG 1 cut(s) 140
FspBI CTAG 1 cut(s) 622
GlaI GCGC 1 cut(s) 399
HaeII RGCGCY 1 cut(s) 401
HaeIII GGCC 1 cut(s) 98
HapII CCGG 1 cut(s) 425
HhaI GCGC 1 cut(s) 400
Hin1II CATG 2 cut(s) 353, 467
Hin6I GCGC 1 cut(s) 398
HinP1I GCGC 1 cut(s) 398
HinfI GANTC 8 cut(s) 14, 190, 257, 434, 467, 476, 541, 570
HpaII CCGG 1 cut(s) 425
HphI GGTGA 3 cut(s) 167, 225, 286
Hpy166II GTNNAC 2 cut(s) 233, 377
Hpy188I TCNGA 3 cut(s) 19, 433, 582
Hpy188III TCNNGA 3 cut(s) 58, 71, 612
Hpy8I GTNNAC 2 cut(s) 233, 377
HpyAV CCTTC 4 cut(s) 41, 109, 113, 555
HpyCH4III ACNGT 1 cut(s) 163
HpyCH4IV ACGT 2 cut(s) 444, 575
HpyCH4V TGCA 1 cut(s) 215
HpySE526I ACGT 2 cut(s) 444, 575
Hsp92II CATG 2 cut(s) 353, 467
HspAI GCGC 1 cut(s) 398
Kzo9I GATC 1 cut(s) 22
LmnI GCTCC 1 cut(s) 604
MaeI CTAG 1 cut(s) 622
MaeII ACGT 2 cut(s) 444, 575
MaeIII GTNAC 2 cut(s) 195, 571
MalI GATC 1 cut(s) 24
MboI GATC 1 cut(s) 22
MboII GAAGA 4 cut(s) 23, 32, 360, 528
MhlI GDGCHC 1 cut(s) 450
MluCI AATT 5 cut(s) 90, 337, 439, 583, 616
MlyI GAGTC 3 cut(s) 266, 443, 579
MmeI TCCRAC 2 cut(s) 369, 483
MnlI CCTC 3 cut(s) 55, 192, 531
MspI CCGG 1 cut(s) 425
MspR9I CCNGG 2 cut(s) 85, 124
MvaI CCWGG 2 cut(s) 85, 124
NdeII GATC 1 cut(s) 22
NlaIII CATG 2 cut(s) 353, 467
NlaIV GGNNCC 1 cut(s) 412
NmuCI GTSAC 1 cut(s) 571
NspV TTCGAA 1 cut(s) 539
PasI CCCWGGG 1 cut(s) 123
PceI AGGCCT 1 cut(s) 98
PfeI GAWTC 5 cut(s) 14, 190, 467, 476, 541
PleI GAGTC 3 cut(s) 265, 442, 578
PpsI GAGTC 3 cut(s) 265, 442, 578
Ppu21I YACGTR 1 cut(s) 445
Psp6I CCWGG 2 cut(s) 83, 122
PspGI CCWGG 2 cut(s) 83, 122
PspN4I GGNNCC 1 cut(s) 412
Sau3AI GATC 1 cut(s) 22
SchI GAGTC 3 cut(s) 266, 443, 579
ScrFI CCNGG 2 cut(s) 85, 124
SduI GDGCHC 1 cut(s) 450
SetI ASST 6 cut(s) 33, 47, 157, 238, 447, 578
SfcI CTRYAG 1 cut(s) 162
SfuI TTCGAA 1 cut(s) 539
Sse9I AATT 5 cut(s) 90, 337, 439, 583, 616
SseBI AGGCCT 1 cut(s) 98
SspMI CTAG 1 cut(s) 622
StuI AGGCCT 1 cut(s) 98
StyD4I CCNGG 2 cut(s) 83, 122
StyI CCWWGG 1 cut(s) 490
TaaI ACNGT 1 cut(s) 163
TaiI ACGT 2 cut(s) 447, 578
TaqI TCGA 2 cut(s) 437, 539
TasI AATT 5 cut(s) 90, 337, 439, 583, 616
TfiI GAWTC 5 cut(s) 14, 190, 467, 476, 541
TscAI CASTG 1 cut(s) 331
TseFI GTSAC 1 cut(s) 571
Tsp45I GTSAC 1 cut(s) 571
TspDTI ATGAA 3 cut(s) 17, 480, 597
TspGWI ACGGA 1 cut(s) 520
TspRI CASTG 1 cut(s) 331
XapI RAATTY 3 cut(s) 337, 583, 616
XspI CTAG 1 cut(s) 622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.