Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

47300723 .. 47304757

Gene Structure 4035 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G022360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4035 bp

ATGAAGGAGATCTCTTTGCAAGGTAAGTACCGTGAGCATATACATAAAACTTTTCAAGGTGAAATTAGTCCTAAAATCATTGAGTTGCAGCATTTGAAATATTTGAACCTCAGTGACAATTCCTTCACTGCCAGCCAAATTACAGCACTCATTTGTTCTCTATCCAATTTAAGACACCTAGATCTCAGTTTCAATGACCTCTATGGGAGCAAAATTCCAAAGCTCATTGGTAATCTGACCAATTTAAGATATCTAGAGCTCTTTGGGAATGAATTAGGTGATGAAATTCCATATCATCAGCTTGGAAACCTTACTCATTTGCAGTATCTCAATCTCGGGTATAATTTCTTCACTCTAGTTGGAGGAAACCTCAATTGGCTCTCACATCTTTCTTCTTTAAAATACCTGGACTTGAGTTTCACCAGTCTAAGTAAGGTTTCTGATTGGCTGGAAACAATAAACAAGCTCCCTGACCTAAGAAACTTGACCTTAATAGGATGTGATCTTCCTCCTCCAACTCTTTCCACTCTTTCTCACATAAATTCTTCCAATTCTCTTGTAAGTGTTGAATTGTTTGCAAATCCTGCTGTCAGTTCTTCAATATTCAAATGGTTGTGCAACTACAATACCACCCTTGTTCATATTGACCTCTCTTCCACCCAATTAAGTGATTTGATTCCCGATGCTTTCGAAAATATGAATTCACTTGCATATCTTGGCCTCAGTGATATCCAATTAAGTGATTTGACTGCTAATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACATCTCTTCCAACCAATTAAGTGGTTTGATTCCCTATGCTTTTGCAAACATTAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCTATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAAATAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTTCAACCAATTAAGTGGTTTGATTCCCCATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTTCAACCAATTAAGTGGTTTGATTCCTGATGCTTTTGCAAGCATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTAAATATCTGTCCCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGGAAACATGAGATCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGCTTGATTCCTTATGCTTTTGCAAACATGGGATCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCGGATGCTTTTGGAAACATGAGCTCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGCTTGATTCCTTATGCTTTTGCAAACATGGGATCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCGGATGCTTTTGCAAACATGAGCTCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCTTATGCTTTTGGAAACATCAGATCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTTCCGATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGGAAACATGAGATCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGCTTGATTCCTTATGCTTTTGCAAACATGGGATCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTATGTGGTTTGATTCCCGATGCTTTTGGAAACATGAGATCACTTGTAACTCTTGACCTCTCTTCCAACCAATTTAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTAAATATCTGTCCCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTGTTGGAAACATGAGATCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGCTTGATTCCTTATGCTTTTGCAAACATGGGATCACTTGTAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCTCACTTGTAACTCTTAACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCTTATGCTTTTGCAAACATGAGATCACTTGTAACTCTTGTCCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATAAGCTCACTTGCAACTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTTGCAAACATGAGCACACTTGCAAATCTTGACTCTATTAACCCACTTGAAGGAGGAATCCCAGTATCCATTGGCCAGTTATGTAATTTGCGATCCTTGGCCATTTCAGACAGTAGGTTGCATGGACAGTTCTCTGAGTTTGTTCAAACATTGTCTACATGTACTCAAAATTCATTGGAGGAATTGCATCTCAATCATAATGATCTTGCTGGGTCATTGCCTAATCTTGCAAACTTTCAATCATTGAAGGAATTGTATCTCTCTGAAAATCAGTTGAGTGGAATCATTCCTGATAGTATTGGAAAGTTGTCTTCGTTGAAGACATTAGATCTCAAAGAAAATAGGCTAAGCGGAATGATACCGGAAAGTATTGGGCAAATGTCATTGTTGAGAGAGTTGTATCTACCGGGAAACCAACTTAGTGGAATGATACCGGAGAGTATTGGGAAATTTTCAGCCTTGCATAAATTAGACCTCTCCGGAAATCAATTAAACGGGACAGTACCTGAAAGTATTGGACAATGCTCAGAATTGTCCAATATGAATCTTAGTAAGAATTCTTTGGAAGGGGTAATTTCGGAAGTTCATTTTTCAAAATTGTCTGCACTAGGGGCATTGGATTTATCCTATAACCCATTAGTTTTCAATGTCAATTCTGACTGGGTTCCTCCTTTTCAATTGGGCTCTCTAAGTATGAGGTCTTGCCAGATGGGGACATATTTCCCAAACTGGCTTCGAACTCAACAAAGTCTTTCCAAACTTGATATCTCCTATGCTGGAATTTCAGATGTCCTTCCAAGTTGGTTCTGGAGTCTCTTTGGTAACATTCATACAATAGATCTCTCTCATAATCAAATTAGAGGAACATTTGAGAGTTCAGCATTGAATGTTACATCATTGCCTGGAGTTGAAGTTCATTTCGGTTCGAACCAATTCGAAGGTCCAATACCGTCAAGTTTATTAGCTGCGTCATATTTGGATCTCTCCGATAATAAGTTTTCAGACATGACTTCCTTGTGTGTTACTTCAGAGCTTCAAAGATTAAAGTTTCTTGATCTCTCAGGCAATCATGTTTCAGGAGAAATTCCAGATTGTTGGAGGCATTTGGTCTCCCTAGAACTACTCGATTTGAGTAGCAATGCTTTTTCCGGGAAAATCCCGACCACTATAGGCACTTTATTTCGAATGGAAACATTGAAATTAAGAAGCAACAAACTTGTGGGAGAATTGCCTTCATCCTTGAAGAATTGTAAGAGGTTAAAAGTGATTGATCTCGGAGATAATAAGCTTTCAGGATCAGTCCCTGAATGGTTGGGAGTTAGTTTTCCAAATTTGGTTATACTAAATGCCTCAATAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1344

Amino Acids

144.15

Weight (kDa)

4.56

Isoelectric Point (pI)

32.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	26 - 166	2.1e-11	Leucine-rich repeat region
LRR_5	PF13306	208 - 316	9.4e-09	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	211 - 270	2.6e-09	Leucine rich repeat
LRR_8	PF13855	245 - 294	4.6e-09	Leucine rich repeat
LRR_8	PF13855	259 - 318	3.3e-14	Leucine rich repeat
LRR_8	PF13855	283 - 342	1.3e-15	Leucine rich repeat
LRR_5	PF13306	300 - 412	1.4e-07	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	307 - 366	4.9e-15	Leucine rich repeat
LRR_8	PF13855	355 - 414	6.5e-15	Leucine rich repeat
LRR_8	PF13855	417 - 476	2.2e-16	Leucine rich repeat
LRR_14	PF23598	421 - 523	1.5e-08	Leucine-rich repeat region
LRR_5	PF13306	434 - 561	2.7e-09	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	464 - 524	5.6e-14	Leucine rich repeat
LRR_8	PF13855	489 - 548	1.6e-14	Leucine rich repeat
LRR_8	PF13855	513 - 572	2.5e-14	Leucine rich repeat
LRR_5	PF13306	530 - 642	3.9e-08	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	537 - 596	5e-14	Leucine rich repeat
LRR_8	PF13855	584 - 644	1.1e-14	Leucine rich repeat
LRR_5	PF13306	601 - 714	3.6e-08	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	609 - 668	1.8e-14	Leucine rich repeat
LRR_8	PF13855	633 - 692	3.8e-14	Leucine rich repeat
LRR_8	PF13855	657 - 716	2.5e-15	Leucine rich repeat
LRR_5	PF13306	674 - 799	3.8e-06	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	681 - 740	7.5e-14	Leucine rich repeat
LRR_8	PF13855	721 - 764	2.7e-10	Leucine rich repeat
LRR_8	PF13855	728 - 788	1.6e-14	Leucine rich repeat
LRR_14	PF23598	749 - 833	1.1e-07	Leucine-rich repeat region
LRR_8	PF13855	753 - 812	1e-12	Leucine rich repeat
LRR_8	PF13855	776 - 836	3.1e-14	Leucine rich repeat
LRR_5	PF13306	794 - 901	6.2e-08	BspA type Leucine rich repeat region (6 copies)
LRR_8	PF13855	801 - 860	5.6e-14	Leucine rich repeat
LRR_8	PF13855	848 - 902	2.3e-10	Leucine rich repeat
LRR_14	PF23598	963 - 1148	1e-15	Leucine-rich repeat region
LRR_8	PF13855	972 - 1031	8.6e-13	Leucine rich repeat
LRR_8	PF13855	1044 - 1104	2.5e-08	Leucine rich repeat
LRR_8	PF13855	1216 - 1272	2.2e-06	Leucine rich repeat
LRR_14	PF23598	1217 - 1316	4.5e-07	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	2828
AccIII	TCCGGA	3 cut(s)	1513, 1657, 3152
AciI	CCGC	1 cut(s)	3024
AclWI	GGATC	7 cut(s)	1471, 1615, 1975, 2407, 2760, 3660, 3976
AcoI	YGGCCR	2 cut(s)	2746, 2772
AcuI	CTGAAG	1 cut(s)	3684
AfaI	GTAC	3 cut(s)	29, 2836, 3177
AfiI	CCNNNNNNNGG	1 cut(s)	2723
AflIII	ACRYGT	1 cut(s)	2831
AjnI	CCWGG	2 cut(s)	405, 3574
AjuI	GAANNNNNNNTTGG	2 cut(s)	358, 390
AloI	GAACNNNNNNTCC	2 cut(s)	3570, 3602
Alw26I	GTCTC	2 cut(s)	3491, 3787
AlwI	GGATC	7 cut(s)	1471, 1615, 1975, 2407, 2760, 3660, 3976
AlwNI	CAGNNNCTG	2 cut(s)	3179, 3977
Ama87I	CYCGRG	1 cut(s)	335
Aor13HI	TCCGGA	3 cut(s)	1513, 1657, 3152
AoxI	GGCC	3 cut(s)	718, 2746, 2772
ApeKI	GCWGC	2 cut(s)	88, 3638
Asp700I	GAANNNNTTC	1 cut(s)	3605
AspS9I	GGNCC	1 cut(s)	3614
AsuC2I	CCSGG	2 cut(s)	3081, 3823
AsuHPI	GGTGA	3 cut(s)	71, 290, 412
AsuII	TTCGAA	5 cut(s)	690, 3409, 3599, 3609, 3856
AvaI	CYCGRG	1 cut(s)	335
AvaII	GGWCC	1 cut(s)	3614
BalI	TGGCCA	2 cut(s)	2748, 2774
BarI	GAAGNNNNNNTAC	4 cut(s)	332, 364, 3603, 3635
BbsI	GAAGAC	2 cut(s)	2976, 2999
BbvI	GCAGC	2 cut(s)	100, 3625
BccI	CCATC	1 cut(s)	3376
BciT130I	CCWGG	2 cut(s)	407, 3576
BciVI	GTATCC	1 cut(s)	2749
BcnI	CCSGG	2 cut(s)	3081, 3823
BcoDI	GTCTC	2 cut(s)	3491, 3787
BfaI	CTAG	5 cut(s)	179, 254, 356, 3281, 3788
BfmI	CTRYAG	1 cut(s)	3840
BfuI	GTATCC	1 cut(s)	2749
BglII	AGATCT	4 cut(s)	9, 181, 3001, 3511
BisI	GCNGC	2 cut(s)	89, 3639
BlpI	GCTNAGC	1 cut(s)	3020
BlsI	GCNGC	2 cut(s)	90, 3640
Bme1390I	CCNGG	4 cut(s)	407, 3081, 3576, 3823
Bme18I	GGWCC	1 cut(s)	3614
BmeT110I	CYCGRG	1 cut(s)	335
BmgT120I	GGNCC	1 cut(s)	3614
BmiI	GGNNCC	1 cut(s)	3339
BmrFI	CCNGG	4 cut(s)	407, 3081, 3576, 3823
BmrI	ACTGGG	2 cut(s)	2729, 3343
BmuI	ACTGGG	2 cut(s)	2729, 3343
BpiI	GAAGAC	2 cut(s)	2976, 2999
BplI	GAGNNNNNCTC	2 cut(s)	354, 386
BpmI	CTGGAG	2 cut(s)	3502, 3597
Bpu1102I	GCTNAGC	1 cut(s)	3020
Bpu14I	TTCGAA	5 cut(s)	690, 3409, 3599, 3609, 3856
BpuEI	CTTGAG	1 cut(s)	433
BpuMI	CCSGG	2 cut(s)	3081, 3823
BsaI	GGTCTC	1 cut(s)	3787
BsaJI	CCNNGG	1 cut(s)	2769
BsaWI	WCCGGW	5 cut(s)	1513, 1657, 3034, 3106, 3152
BsaXI	ACNNNNNCTCC	2 cut(s)	3570, 3600
Bsc4I	CCNNNNNNNGG	1 cut(s)	2723
Bse1I	ACTGG	5 cut(s)	423, 2735, 2749, 3338, 3407
Bse3DI	GCAATG	3 cut(s)	2888, 3569, 3817
BseAI	TCCGGA	3 cut(s)	1513, 1657, 3152
BseBI	CCWGG	2 cut(s)	407, 3576
BseDI	CCNNGG	1 cut(s)	2769
BseGI	GGATG	4 cut(s)	503, 1522, 1666, 3908
BseLI	CCNNNNNNNGG	1 cut(s)	2723
BseMI	GCAATG	3 cut(s)	2888, 3569, 3817
BseMII	CTCAG	6 cut(s)	124, 199, 736, 2799, 3213, 3747
BseNI	ACTGG	5 cut(s)	423, 2735, 2749, 3338, 3407
BseRI	GAGGAG	1 cut(s)	501
BseXI	GCAGC	2 cut(s)	100, 3625
BseYI	CCCAGC	1 cut(s)	2882
BsgI	GTGCAG	1 cut(s)	3261
BshFI	GGCC	3 cut(s)	720, 2748, 2774
BsiHKCI	CYCGRG	1 cut(s)	335
BsiSI	CCGG	7 cut(s)	1514, 1658, 3035, 3080, 3107, 3153, 3822
BslFI	GGGAC	5 cut(s)	1321, 2257, 3184, 3400, 3959
BslI	CCNNNNNNNGG	1 cut(s)	2723
BsmAI	GTCTC	2 cut(s)	3491, 3787
BsmFI	GGGAC	5 cut(s)	1321, 2257, 3184, 3400, 3959
BsnI	GGCC	3 cut(s)	720, 2748, 2774
Bso31I	GGTCTC	1 cut(s)	3787
BsoBI	CYCGRG	1 cut(s)	335
Bsp119I	TTCGAA	5 cut(s)	690, 3409, 3599, 3609, 3856
Bsp13I	TCCGGA	3 cut(s)	1513, 1657, 3152
Bsp1720I	GCTNAGC	1 cut(s)	3020
BspACI	CCGC	1 cut(s)	3024
BspANI	GGCC	3 cut(s)	720, 2748, 2774
BspCNI	CTCAG	6 cut(s)	123, 198, 735, 2800, 3212, 3746
BspEI	TCCGGA	3 cut(s)	1513, 1657, 3152
BspLI	GGNNCC	1 cut(s)	3339
BspPI	GGATC	7 cut(s)	1471, 1615, 1975, 2407, 2760, 3660, 3976
BspT104I	TTCGAA	5 cut(s)	690, 3409, 3599, 3609, 3856
BspTNI	GGTCTC	1 cut(s)	3787
BsrDI	GCAATG	3 cut(s)	2888, 3569, 3817
BsrI	ACTGG	5 cut(s)	423, 2735, 2749, 3338, 3407
BssECI	CCNNGG	1 cut(s)	2769
BssT1I	CCWWGG	1 cut(s)	2769
Bst2UI	CCWGG	2 cut(s)	407, 3576
Bst4CI	ACNGT	5 cut(s)	32, 2786, 2802, 3175, 3624
BstAPI	GCANNNNNTGC	1 cut(s)	584
BstBI	TTCGAA	5 cut(s)	690, 3409, 3599, 3609, 3856
BstC8I	GCNNGC	2 cut(s)	133, 1198
BstF5I	GGATG	4 cut(s)	503, 1522, 1666, 3908
BstMAI	GTCTC	2 cut(s)	3491, 3787
BstMWI	GCNNNNNNNGC	2 cut(s)	584, 3284
BstNI	CCWGG	2 cut(s)	407, 3576
BstNSI	RCATGY	1 cut(s)	2835
BstSCI	CCNGG	4 cut(s)	405, 3079, 3574, 3821
BstSFI	CTRYAG	1 cut(s)	3840
BstV1I	GCAGC	2 cut(s)	100, 3625
BstV2I	GAAGAC	2 cut(s)	2976, 2999
BstX2I	RGATCY	5 cut(s)	9, 181, 3001, 3511, 3652
BstYI	RGATCY	5 cut(s)	9, 181, 3001, 3511, 3652
BsuI	GTATCC	1 cut(s)	2749
BsuRI	GGCC	3 cut(s)	720, 2748, 2774
BtsCI	GGATG	4 cut(s)	503, 1522, 1666, 3908
BtsI	GCAGTG	1 cut(s)	126
BtsIMutI	CAGTG	3 cut(s)	118, 126, 730
Cac8I	GCNNGC	2 cut(s)	133, 1198
CaiI	CAGNNNCTG	2 cut(s)	3179, 3977
Cfr13I	GGNCC	1 cut(s)	3614
CseI	GACGC	1 cut(s)	3630
Csp6I	GTAC	3 cut(s)	28, 2835, 3176
CviQI	GTAC	3 cut(s)	28, 2835, 3176
DraI	TTTAAA	1 cut(s)	399
EaeI	YGGCCR	2 cut(s)	2746, 2772
Eco130I	CCWWGG	1 cut(s)	2769
Eco31I	GGTCTC	1 cut(s)	3787
Eco32I	GATATC	3 cut(s)	251, 730, 3439
Eco47I	GGWCC	1 cut(s)	3614
Eco57I	CTGAAG	1 cut(s)	3684
Eco88I	CYCGRG	1 cut(s)	335
EcoRI	GAATTC	2 cut(s)	700, 3229
EcoRII	CCWGG	2 cut(s)	405, 3574
EcoRV	GATATC	3 cut(s)	251, 730, 3439
EcoT14I	CCWWGG	1 cut(s)	2769
ErhI	CCWWGG	1 cut(s)	2769
FaqI	GGGAC	5 cut(s)	1321, 2257, 3184, 3400, 3959
FblI	GTMKAC	1 cut(s)	2828
Fnu4HI	GCNGC	2 cut(s)	89, 3639
FokI	GGATG	4 cut(s)	510, 1529, 1673, 3895
Fsp4HI	GCNGC	2 cut(s)	89, 3639
FspBI	CTAG	5 cut(s)	179, 254, 356, 3281, 3788
GluI	GCNGC	2 cut(s)	89, 3639
GsaI	CCCAGC	1 cut(s)	2886
GsuI	CTGGAG	2 cut(s)	3502, 3597
HaeIII	GGCC	3 cut(s)	720, 2748, 2774
HapII	CCGG	7 cut(s)	1514, 1658, 3035, 3080, 3107, 3153, 3822
HgaI	GACGC	1 cut(s)	3630
HindIII	AAGCTT	1 cut(s)	3959
HpaII	CCGG	7 cut(s)	1514, 1658, 3035, 3080, 3107, 3153, 3822
HphI	GGTGA	3 cut(s)	71, 290, 412
Hpy166II	GTNNAC	1 cut(s)	2829
Hpy8I	GTNNAC	1 cut(s)	2829
HpyAV	CCTTC	7 cut(s)	133, 2717, 2914, 3233, 3476, 3605, 3915
HpyCH4III	ACNGT	5 cut(s)	32, 2786, 2802, 3175, 3624
HpyF10VI	GCNNNNNNNGC	2 cut(s)	584, 3284
Kpn2I	TCCGGA	3 cut(s)	1513, 1657, 3152
LmnI	GCTCC	3 cut(s)	207, 471, 1245
Lsp1109I	GCAGC	2 cut(s)	100, 3625
MaeI	CTAG	5 cut(s)	179, 254, 356, 3281, 3788
MfeI	CAATTG	2 cut(s)	373, 3350
MflI	RGATCY	5 cut(s)	9, 181, 3001, 3511, 3652
MlsI	TGGCCA	2 cut(s)	2748, 2774
MluNI	TGGCCA	2 cut(s)	2748, 2774
MlyI	GAGTC	2 cut(s)	2699, 3493
Mox20I	TGGCCA	2 cut(s)	2748, 2774
MroI	TCCGGA	3 cut(s)	1513, 1657, 3152
MroXI	GAANNNNTTC	1 cut(s)	3605
MscI	TGGCCA	2 cut(s)	2748, 2774
Msp20I	TGGCCA	2 cut(s)	2748, 2774
MspI	CCGG	7 cut(s)	1514, 1658, 3035, 3080, 3107, 3153, 3822
MspR9I	CCNGG	4 cut(s)	407, 3081, 3576, 3823
MunI	CAATTG	2 cut(s)	373, 3350
MvaI	CCWGG	2 cut(s)	407, 3576
MwoI	GCNNNNNNNGC	2 cut(s)	584, 3284
NciI	CCSGG	2 cut(s)	3081, 3823
NlaIV	GGNNCC	1 cut(s)	3339
NmuCI	GTSAC	1 cut(s)	113
NspI	RCATGY	1 cut(s)	2835
NspV	TTCGAA	5 cut(s)	690, 3409, 3599, 3609, 3856
PciI	ACATGT	1 cut(s)	2831
PdmI	GAANNNNTTC	1 cut(s)	3605
PfoI	TCCNGGA	1 cut(s)	3821
PkrI	GCNGC	2 cut(s)	90, 3640
PleI	GAGTC	2 cut(s)	2699, 3492
PpsI	GAGTC	2 cut(s)	2699, 3492
PscI	ACATGT	1 cut(s)	2831
Psp6I	CCWGG	2 cut(s)	405, 3574
PspFI	CCCAGC	1 cut(s)	2882
PspGI	CCWGG	2 cut(s)	405, 3574
PspN4I	GGNNCC	1 cut(s)	3339
PspPI	GGNCC	1 cut(s)	3614
PstNI	CAGNNNCTG	2 cut(s)	3179, 3977
PsuI	RGATCY	5 cut(s)	9, 181, 3001, 3511, 3652
RsaI	GTAC	3 cut(s)	29, 2836, 3177
RsaNI	GTAC	3 cut(s)	28, 2835, 3176
SatI	GCNGC	2 cut(s)	89, 3639
Sau96I	GGNCC	1 cut(s)	3614
SchI	GAGTC	2 cut(s)	2699, 3493
ScrFI	CCNGG	4 cut(s)	407, 3081, 3576, 3823
SfcI	CTRYAG	1 cut(s)	3840
SfuI	TTCGAA	5 cut(s)	690, 3409, 3599, 3609, 3856
SinI	GGWCC	1 cut(s)	3614
SmlI	CTYRAG	1 cut(s)	412
SmoI	CTYRAG	1 cut(s)	412
SsiI	CCGC	1 cut(s)	3024
SspI	AATATT	2 cut(s)	101, 603
SspMI	CTAG	5 cut(s)	179, 254, 356, 3281, 3788
StyD4I	CCNGG	4 cut(s)	405, 3079, 3574, 3821
StyI	CCWWGG	1 cut(s)	2769
TaaI	ACNGT	5 cut(s)	32, 2786, 2802, 3175, 3624
TaqI	TCGA	6 cut(s)	690, 3409, 3599, 3609, 3798, 3856
TatI	WGTACW	1 cut(s)	2834
TscAI	CASTG	3 cut(s)	118, 133, 730
TseFI	GTSAC	1 cut(s)	113
TseI	GCWGC	2 cut(s)	88, 3638
Tsp45I	GTSAC	1 cut(s)	113
TspRI	CASTG	3 cut(s)	118, 133, 730
VpaK11BI	GGWCC	1 cut(s)	3614
XbaI	TCTAGA	1 cut(s)	253
XceI	RCATGY	1 cut(s)	2835
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3477
XmiI	GTMKAC	1 cut(s)	2828
XmnI	GAANNNNTTC	1 cut(s)	3605
XspI	CTAG	5 cut(s)	179, 254, 356, 3281, 3788

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.