Rw7G039350
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
N/A
Physical Location & Seq
Reverse (-)
60580481 .. 60586107
5627 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G039350.1

Sequence Viewer

Length: 1356 bp
ATGTCTGCATTATCTTTTTATGCAAAGCGCTTGATCGGTAGGAGATTCAGTGATGCCTCTGTTCAAAATGATATGAAGCTTTGGCCATTCAAGGTTGTGGAAGGTGCCAACGACAAGCCAATGATCATGGTTACACACCAGCGTGAAGAGAAACAATTTGCTGCTGAGGAAATCTCATCTATGTATCTGGACTCAACTGTGGAAAATGCGGTTATAACTGTTCCCGCTTACTTCAATAACTCACAGCGTGAGGCTACAAAAAATGCTGGAGTCAATGCAGGTCTAAAGGTGATGCACATTATTAATGAACCGACAGCTGCGGCCATTGCTTACGGCCTTGAGAAACAGGCCGGTTGGTATGGCAAGAGAAATGTGATGATATTCGATTTGGGTGGTGGCACATTAGATGTGTCACTACTTACCATAGGGGATGGTGTCTTTGAAGTGAAAGCCACTGCTGGAGACACTCATCTTGGAGGTGAAGATATCGATAACAACATGGTAAACTATTGTATTGATCAATTCAAGGCAAAGCATAATTTGGATGTCAGTGAAAACCCCAAGGCTCTTAGGAGGTTAAGAAATGCTTGTGAGAAGGCAAAAAGGAGACTTTCATTTACGTCCACGATTGACCTTGAAGTTGACTGTTTGGATCGAGGTACTGATTTCTTTATTACAGTTACTCGTGCCAAATTTGAACAACTGAACATGGATTTCTTCAACAAGTGCATGAACCCTAATATTTTCAAGGGGAAAAAGCTGTGCCAGAGTATTAATCCGGATGAGGCGGTGGCATATGGAGCCGCTGTTCATGCTGCAATTTTGAGTGAGAATGAAAATAGAAAGCTACAAAACTTCACTCTCTTAGATGTTACCCCTGTGTCACTTGGGGTGGAGGTTGGTCTAGACAAATTTATGCAAATTGTGATTCCAAGAAATACCAAAGTTCCTGTAATTAAGAACTGGCCTTTGACTACTCTGGCCCGCAAAGTGTTTGACAAAATCCTAAGAGATCAAAGACAGAAGGATGGTCGCCGTTTGGAGCGCAATCCCAAGCGACAGAAGATGGTTTCTGATCTTGAAACCAGAGAACGAGCTGCAAAGTTTGACAGGGATGCCAAAGTTAGACAAGAACGAGATGAGAGAATGAAGAGGAAGTTGGATGAAGAGTGTGCAAGATATCGTGCAATGCCTCCGAAGAGAGAGACTGGGGGAACTCCGACAGCTGAGAAGTATGATGAACCTGATCGAATGAATCATATGGTCGGGGTTGGCTTTCGAACATTTGAAGATGATGTTTTAAAGAAGGTTGCACAGGCTGGGCAGAAGCAAAAACTTGATAGACAAGGTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

451

Amino Acids

51.15

Weight (kDa)

9.18

Isoelectric Point (pI)

39.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 7 - 246 1.8e-89 Hsp70 protein
MreB_Mbl PF06723 68 - 184 4.4e-12 MreB/Mbl protein
HSP70 PF00012 249 - 327 3.9e-17 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 215
Acc36I ACCTGC 1 cut(s) 269
AccB1I GGYRCC 1 cut(s) 104
AccIII TCCGGA 1 cut(s) 778
AciI CCGC 6 cut(s) 209, 225, 320, 788, 804, 985
AclWI GGATC 1 cut(s) 660
AcoI YGGCCR 2 cut(s) 83, 321
AcsI RAATTY 2 cut(s) 692, 911
AdeI CACNNNGTG 1 cut(s) 248
AfaI GTAC 1 cut(s) 661
AfeI AGCGCT 1 cut(s) 29
AjuI GAANNNNNNNTTGG 2 cut(s) 1142, 1174
AleI CACNNNNGTG 1 cut(s) 141
AloI GAACNNNNNNTCC 2 cut(s) 792, 824
AluBI AGCT 6 cut(s) 79, 317, 760, 847, 1097, 1226
AluI AGCT 6 cut(s) 79, 317, 760, 847, 1097, 1226
Alw26I GTCTC 3 cut(s) 456, 601, 1199
AlwI GGATC 1 cut(s) 660
Aor13HI TCCGGA 1 cut(s) 778
Aor51HI AGCGCT 1 cut(s) 29
AoxI GGCC 6 cut(s) 83, 321, 334, 348, 965, 981
ApeKI GCWGC 4 cut(s) 161, 317, 815, 1097
ApoI RAATTY 2 cut(s) 692, 911
AseI ATTAAT 2 cut(s) 303, 774
AspLEI GCGC 2 cut(s) 30, 1047
AspS9I GGNCC 1 cut(s) 982
AsuHPI GGTGA 2 cut(s) 301, 491
AsuII TTCGAA 1 cut(s) 1279
BalI TGGCCA 1 cut(s) 85
BanI GGYRCC 1 cut(s) 104
BauI CACGAG 1 cut(s) 684
BbvCI CCTCAGC 1 cut(s) 165
BbvI GCAGC 4 cut(s) 148, 304, 802, 1084
BccI CCATC 3 cut(s) 425, 1022, 1060
BceAI ACGGC 2 cut(s) 349, 1020
BclI TGATCA 2 cut(s) 123, 517
BcoDI GTCTC 3 cut(s) 456, 601, 1199
BfaI CTAG 1 cut(s) 905
BfoI RGCGCY 1 cut(s) 31
BfuAI ACCTGC 1 cut(s) 269
BisI GCNGC 6 cut(s) 162, 318, 321, 804, 816, 1098
BlsI GCNGC 6 cut(s) 163, 319, 322, 805, 817, 1099
BmgT120I GGNCC 1 cut(s) 982
BmiI GGNNCC 2 cut(s) 106, 802
BmrI ACTGGG 1 cut(s) 1218
BmsI GCATC 3 cut(s) 43, 282, 1105
BmuI ACTGGG 1 cut(s) 1218
BplI GAGNNNNNCTC 2 cut(s) 158, 190
BpmI CTGGAG 2 cut(s) 288, 480
Bpu10I CCTNAGC 1 cut(s) 165
Bpu14I TTCGAA 1 cut(s) 1279
BpuEI CTTGAG 1 cut(s) 359
Bsa29I ATCGAT 1 cut(s) 489
BsaJI CCNNGG 1 cut(s) 561
BsaWI WCCGGW 1 cut(s) 778
BsaXI ACNNNNNCTCC 4 cut(s) 34, 64, 792, 822
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 2 cut(s) 968, 1213
Bse3DI GCAATG 2 cut(s) 324, 1194
BseAI TCCGGA 1 cut(s) 778
BseCI ATCGAT 1 cut(s) 489
BseDI CCNNGG 1 cut(s) 561
BseGI GGATG 6 cut(s) 436, 550, 787, 1033, 1120, 1168
BseMI GCAATG 2 cut(s) 324, 1194
BseMII CTCAG 2 cut(s) 156, 1218
BseNI ACTGG 2 cut(s) 968, 1213
BseXI GCAGC 4 cut(s) 148, 304, 802, 1084
BseYI CCCAGC 1 cut(s) 1319
BshFI GGCC 6 cut(s) 85, 323, 336, 350, 967, 983
BshNI GGYRCC 1 cut(s) 104
BshVI ATCGAT 1 cut(s) 489
BsiSI CCGG 2 cut(s) 351, 779
BsmAI GTCTC 3 cut(s) 456, 601, 1199
BsnI GGCC 6 cut(s) 85, 323, 336, 350, 967, 983
Bsp119I TTCGAA 1 cut(s) 1279
Bsp13I TCCGGA 1 cut(s) 778
Bsp143I GATC 7 cut(s) 33, 123, 517, 652, 1012, 1075, 1246
BspACI CCGC 6 cut(s) 209, 225, 320, 788, 804, 985
BspANI GGCC 6 cut(s) 85, 323, 336, 350, 967, 983
BspCNI CTCAG 2 cut(s) 157, 1219
BspDI ATCGAT 1 cut(s) 489
BspEI TCCGGA 1 cut(s) 778
BspLI GGNNCC 2 cut(s) 106, 802
BspMI ACCTGC 1 cut(s) 269
BspPI GGATC 1 cut(s) 660
BspT104I TTCGAA 1 cut(s) 1279
BspT107I GGYRCC 1 cut(s) 104
BsrDI GCAATG 2 cut(s) 324, 1194
BsrFI RCCGGY 1 cut(s) 350
BsrI ACTGG 2 cut(s) 968, 1213
BssAI RCCGGY 1 cut(s) 350
BssECI CCNNGG 1 cut(s) 561
BssMI GATC 7 cut(s) 33, 123, 517, 652, 1012, 1075, 1246
BssSI CACGAG 1 cut(s) 684
BssT1I CCWWGG 1 cut(s) 561
Bst2BI CACGAG 1 cut(s) 684
Bst4CI ACNGT 4 cut(s) 199, 220, 647, 679
Bst6I CTCTTC 4 cut(s) 141, 1145, 1161, 1193
BstBI TTCGAA 1 cut(s) 1279
BstC8I GCNNGC 1 cut(s) 985
BstDEI CTNAG 5 cut(s) 165, 569, 865, 1007, 1227
BstF5I GGATG 6 cut(s) 436, 550, 787, 1033, 1120, 1168
BstH2I RGCGCY 1 cut(s) 31
BstHHI GCGC 2 cut(s) 30, 1047
BstKTI GATC 7 cut(s) 36, 126, 520, 655, 1015, 1078, 1249
BstMAI GTCTC 3 cut(s) 456, 601, 1199
BstMBI GATC 7 cut(s) 33, 123, 517, 652, 1012, 1075, 1246
BstMWI GCNNNNNNNGC 3 cut(s) 326, 800, 812
BstV1I GCAGC 4 cut(s) 148, 304, 802, 1084
Bsu15I ATCGAT 1 cut(s) 489
BsuRI GGCC 6 cut(s) 85, 323, 336, 350, 967, 983
BsuTUI ATCGAT 1 cut(s) 489
BtsCI GGATG 6 cut(s) 436, 550, 787, 1033, 1120, 1168
BtsI GCAGTG 1 cut(s) 453
BtsIMutI CAGTG 3 cut(s) 55, 453, 556
BveI ACCTGC 1 cut(s) 269
Cac8I GCNNGC 1 cut(s) 985
CfoI GCGC 2 cut(s) 30, 1047
Cfr10I RCCGGY 1 cut(s) 350
Cfr13I GGNCC 1 cut(s) 982
ClaI ATCGAT 1 cut(s) 489
Csp6I GTAC 1 cut(s) 660
CviAII CATG 5 cut(s) 127, 499, 709, 730, 812
CviQI GTAC 1 cut(s) 660
DdeI CTNAG 5 cut(s) 165, 569, 865, 1007, 1227
DpnI GATC 7 cut(s) 35, 125, 519, 654, 1014, 1077, 1248
DpnII GATC 7 cut(s) 33, 123, 517, 652, 1012, 1075, 1246
DraI TTTAAA 1 cut(s) 1302
DraIII CACNNNGTG 1 cut(s) 248
EaeI YGGCCR 2 cut(s) 83, 321
Eam1104I CTCTTC 4 cut(s) 141, 1145, 1161, 1193
EarI CTCTTC 4 cut(s) 141, 1145, 1161, 1193
Eco130I CCWWGG 1 cut(s) 561
Eco32I GATATC 2 cut(s) 487, 1181
Eco47III AGCGCT 1 cut(s) 29
EcoRV GATATC 2 cut(s) 487, 1181
EcoT14I CCWWGG 1 cut(s) 561
ErhI CCWWGG 1 cut(s) 561
FaeI CATG 5 cut(s) 130, 502, 712, 733, 815
FalI AAGNNNNNCTT 2 cut(s) 571, 603
FatI CATG 5 cut(s) 126, 498, 708, 729, 811
FauI CCCGC 2 cut(s) 232, 992
FauNDI CATATG 2 cut(s) 796, 1260
FbaI TGATCA 2 cut(s) 123, 517
Fnu4HI GCNGC 6 cut(s) 162, 318, 321, 804, 816, 1098
FokI GGATG 6 cut(s) 443, 557, 794, 1040, 1127, 1175
Fsp4HI GCNGC 6 cut(s) 162, 318, 321, 804, 816, 1098
FspBI CTAG 1 cut(s) 905
GlaI GCGC 2 cut(s) 29, 1046
GluI GCNGC 6 cut(s) 162, 318, 321, 804, 816, 1098
GsaI CCCAGC 1 cut(s) 1323
GsuI CTGGAG 2 cut(s) 288, 480
HaeII RGCGCY 1 cut(s) 31
HaeIII GGCC 6 cut(s) 85, 323, 336, 350, 967, 983
HapII CCGG 2 cut(s) 351, 779
HhaI GCGC 2 cut(s) 30, 1047
Hin1II CATG 5 cut(s) 130, 502, 712, 733, 815
Hin6I GCGC 2 cut(s) 28, 1045
HinP1I GCGC 2 cut(s) 28, 1045
HincII GTYRAC 1 cut(s) 643
HindII GTYRAC 1 cut(s) 643
HindIII AAGCTT 1 cut(s) 77
HinfI GANTC 5 cut(s) 45, 191, 270, 928, 1255
HpaII CCGG 2 cut(s) 351, 779
HphI GGTGA 2 cut(s) 301, 491
Hpy166II GTNNAC 3 cut(s) 505, 624, 643
Hpy188I TCNGA 3 cut(s) 1075, 1197, 1221
Hpy188III TCNNGA 4 cut(s) 188, 779, 905, 1079
Hpy8I GTNNAC 3 cut(s) 505, 624, 643
HpyAV CCTTC 4 cut(s) 95, 589, 1018, 1300
HpyCH4III ACNGT 4 cut(s) 199, 220, 647, 679
HpyCH4IV ACGT 1 cut(s) 620
HpyF10VI GCNNNNNNNGC 3 cut(s) 326, 800, 812
HpyF3I CTNAG 5 cut(s) 165, 569, 865, 1007, 1227
HpySE526I ACGT 1 cut(s) 620
Hsp92II CATG 5 cut(s) 130, 502, 712, 733, 815
HspAI GCGC 2 cut(s) 28, 1045
Kpn2I TCCGGA 1 cut(s) 778
Ksp22I TGATCA 2 cut(s) 123, 517
Kzo9I GATC 7 cut(s) 33, 123, 517, 652, 1012, 1075, 1246
LmnI GCTCC 2 cut(s) 800, 1042
Lsp1109I GCAGC 4 cut(s) 148, 304, 802, 1084
LweI GCATC 3 cut(s) 43, 282, 1105
MaeI CTAG 1 cut(s) 905
MaeII ACGT 1 cut(s) 620
MaeIII GTNAC 5 cut(s) 130, 411, 679, 871, 882
MalI GATC 7 cut(s) 35, 125, 519, 654, 1014, 1077, 1248
MboI GATC 7 cut(s) 33, 123, 517, 652, 1012, 1075, 1246
MboII GAAGA 8 cut(s) 158, 494, 709, 1075, 1162, 1178, 1210, 1301
MlsI TGGCCA 1 cut(s) 85
MluCI AATT 8 cut(s) 155, 521, 538, 692, 819, 911, 921, 954
MluNI TGGCCA 1 cut(s) 85
MlyI GAGTC 2 cut(s) 185, 279
MmeI TCCRAC 2 cut(s) 1140, 1244
Mox20I TGGCCA 1 cut(s) 85
MroI TCCGGA 1 cut(s) 778
MscI TGGCCA 1 cut(s) 85
MseI TTAA 5 cut(s) 303, 578, 774, 957, 1301
MslI CAYNNNNRTG 1 cut(s) 141
Msp20I TGGCCA 1 cut(s) 85
MspA1I CMGCKG 3 cut(s) 317, 806, 1226
MspI CCGG 2 cut(s) 351, 779
MwoI GCNNNNNNNGC 3 cut(s) 326, 800, 812
NdeI CATATG 2 cut(s) 796, 1260
NdeII GATC 7 cut(s) 33, 123, 517, 652, 1012, 1075, 1246
NlaIII CATG 5 cut(s) 130, 502, 712, 733, 815
NlaIV GGNNCC 2 cut(s) 106, 802
NmuCI GTSAC 2 cut(s) 411, 882
NspV TTCGAA 1 cut(s) 1279
OliI CACNNNNGTG 1 cut(s) 141
PfeI GAWTC 3 cut(s) 45, 928, 1255
PkrI GCNGC 6 cut(s) 163, 319, 322, 805, 817, 1099
PleI GAGTC 2 cut(s) 185, 278
PpsI GAGTC 2 cut(s) 185, 278
PshBI ATTAAT 2 cut(s) 303, 774
PsiI TTATAA 1 cut(s) 215
PspFI CCCAGC 1 cut(s) 1319
PspN4I GGNNCC 2 cut(s) 106, 802
PspPI GGNCC 1 cut(s) 982
PvuII CAGCTG 2 cut(s) 317, 1226
RsaI GTAC 1 cut(s) 661
RsaNI GTAC 1 cut(s) 660
RseI CAYNNNNRTG 1 cut(s) 141
SaqAI TTAA 5 cut(s) 303, 578, 774, 957, 1301
SatI GCNGC 6 cut(s) 162, 318, 321, 804, 816, 1098
Sau3AI GATC 7 cut(s) 33, 123, 517, 652, 1012, 1075, 1246
Sau96I GGNCC 1 cut(s) 982
SchI GAGTC 2 cut(s) 185, 279
SfaNI GCATC 3 cut(s) 43, 282, 1105
SfuI TTCGAA 1 cut(s) 1279
SmiMI CAYNNNNRTG 1 cut(s) 141
SmlI CTYRAG 1 cut(s) 338
SmoI CTYRAG 1 cut(s) 338
Sse9I AATT 8 cut(s) 155, 521, 538, 692, 819, 911, 921, 954
SsiI CCGC 6 cut(s) 209, 225, 320, 788, 804, 985
SspI AATATT 1 cut(s) 742
SspMI CTAG 1 cut(s) 905
StyI CCWWGG 1 cut(s) 561
TaaI ACNGT 4 cut(s) 199, 220, 647, 679
TaiI ACGT 1 cut(s) 623
TaqI TCGA 5 cut(s) 384, 489, 655, 1249, 1279
TasI AATT 8 cut(s) 155, 521, 538, 692, 819, 911, 921, 954
TauI GCSGC 2 cut(s) 323, 806
TfiI GAWTC 3 cut(s) 45, 928, 1255
Tru1I TTAA 5 cut(s) 303, 578, 774, 957, 1301
Tru9I TTAA 5 cut(s) 303, 578, 774, 957, 1301
TscAI CASTG 3 cut(s) 55, 460, 556
TseFI GTSAC 2 cut(s) 411, 882
TseI GCWGC 4 cut(s) 161, 317, 815, 1097
Tsp45I GTSAC 2 cut(s) 411, 882
TspRI CASTG 3 cut(s) 55, 460, 556
VspI ATTAAT 2 cut(s) 303, 774
XapI RAATTY 2 cut(s) 692, 911
XbaI TCTAGA 1 cut(s) 904
XspI CTAG 1 cut(s) 905
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.