Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0023633

Physical Location & Seq

Genomic Coordinates Reverse (-)

272111 .. 274930

Gene Structure 2820 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G01740.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGGGAGGTCAAAGCTCAAAGATTGGTACATGTTGTTCACACAAGACTACTGCTCTTGAAGCTCCAGATGTTGAAAACAAAGAGAATGGTGAGGTAAACGGTGTGCATTCTTTTCGTGAATACTCACTAGAACAGCTTAAGATCGCCACCTCTTGTTTTGCTTTGGAGAATGTTGTATCTGAACATGGAGAAACAGCTCCAAATGTTGTCTATCAAGGGAAATTGGAGAATCATATGAAGATTGCTATCAAGCGCTTTTCTGGAACTGCCTGGCCTGATCCTCGCCAATTCCTGGAAGAAGCAAGATTGGTTGGTCAGCTACGCAGCAAAAGAATGGCCAATTTACTCGGTTATTGCTGTGAAGGCGGCGAGAGGTTACTTGTGGCTGAGTTTATGCCTAATGAGACACTAGCCAAACACCTTTTCCACTGGGATACAGAGCCAATGAAATGGGCGATGCGACTAAGGGTTGCTCTATACATTTCAGAAGCTCTTGAATACTGTAGTAACAATGGACACACGCTATATCATGATCTCAATGCTTACAGAGTTTTATTTGACGAGGAATGTAATCCAAGACTTTCAACATTTGGGTTAATGAAGAATAGTCGGGATGGGAAAAGTTATAGCACAAATCTTGCTTTTACCCCACCTGAGTATCTACGAACTGGGAGAATCACAGCAGAGAGTGTGATTTACAGTTTTGGCACTCTTCTGCTTGATCTTCTCACCGGAAAGCATATTCCTCCTAGCCATGCCCTTGATTTGATTCGAGACAGAAATCTTCAGACTCTAACCGATTCCTGCTTGGAGGGACAATTTTCAGACAGTGATGGTACGGAGTTAGTACGCCTGACATCTTGTTGTCTTCAGTATGAAGCTCGTGAGCGACCAAACATAAAATCTTTGGTCACTGCACTGATATCTCTCCAGAAAGACACAGAGGTTCTGTCTCATGTTCTAATGGGTCTGCCTCAAAGTGGTACTTTTGCGTCACCTCCGTCTCCTTTTGCTGAGGCTTGCTCGGGAAAAGACCTGACGTCTATGGTTGAGATCTTGGAAAAAATTGGTTACAAAGACGATGAAGATCTTTCGTTTATGTGGACGGAACAGATGCAAGAAGCTATAAACTCGAAGAAAAAAGGTGATATTGCATTTAGAAGAAAAGACTTTAGTGAAGCCATTGAGTTTTACACGCAGTTTCTTGATTTGGGAATGATCTCTGCAACAGTCTTGGTGCGGCGAAGTCAAAGTTACCTAATGAGTAACATGGCGAAAGAAGCTTTAGATGATGCAATGAAGGCTCAAGGCATTTCTCCTGTTTGGTATGTTGCATTGTATCTCCAGTCTGCTGCTCTTTCTGTCCTGGGAATGGAGAAGGAATCTCAAATCGCACTTACCGAAGGATCCATTCTTGAAGCCAGAAAGATTTCAGCTTCCACACAGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

483

Amino Acids

54.04

Weight (kDa)

5.45

Isoelectric Point (pI)

43.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	63 - 307	1.9e-26	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	68 - 304	4.5e-20	Protein kinase domain
TPR_BSK1_C	PF25575	339 - 450	4.9e-45	Serine/threonine-protein kinase BSK1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0023633)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01740 AT1G01740 AT1G01740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1043
AccB7I	CCANNNNNTGG	1 cut(s)	292
AciI	CCGC	2 cut(s)	366, 1240
AclWI	GGATC	3 cut(s)	272, 1401, 1414
AcoI	YGGCCR	1 cut(s)	336
AcuI	CTGAAG	2 cut(s)	770, 854
AcyI	GRCGYC	1 cut(s)	1040
AfaI	GTAC	4 cut(s)	28, 838, 849, 985
AfeI	AGCGCT	1 cut(s)	254
AfiI	CCNNNNNNNGG	3 cut(s)	292, 980, 1372
AflII	CTTAAG	1 cut(s)	137
AflIII	ACRYGT	1 cut(s)	29
AgsI	TTSAA	5 cut(s)	59, 74, 497, 585, 1418
AhdI	GACNNNNNGTC	1 cut(s)	1039
AjnI	CCWGG	3 cut(s)	269, 291, 1365
AjuI	GAANNNNNNNTTGG	2 cut(s)	407, 439
Alw26I	GTCTC	4 cut(s)	398, 768, 957, 1008
AlwI	GGATC	3 cut(s)	272, 1401, 1414
Ama87I	CYCGRG	1 cut(s)	1024
Aor51HI	AGCGCT	1 cut(s)	254
AoxI	GGCC	2 cut(s)	272, 336
ApeKI	GCWGC	2 cut(s)	324, 1352
Asp700I	GAANNNNTTC	1 cut(s)	1429
AspLEI	GCGC	1 cut(s)	255
AsuHPI	GGTGA	4 cut(s)	101, 721, 987, 1157
AvaI	CYCGRG	1 cut(s)	1024
BaeI	ACNNNNGTAYC	2 cut(s)	641, 674
BalI	TGGCCA	1 cut(s)	338
BamHI	GGATCC	1 cut(s)	1406
BauI	CACGAG	1 cut(s)	882
BbsI	GAAGAC	1 cut(s)	860
BbvCI	CCTCAGC	1 cut(s)	1014
BbvI	GCAGC	2 cut(s)	336, 1339
BccI	CCATC	2 cut(s)	608, 827
BcgI	CGANNNNNNTGC	2 cut(s)	95, 129
BciT130I	CCWGG	3 cut(s)	271, 293, 1367
BciVI	GTATCC	1 cut(s)	427
BcoDI	GTCTC	4 cut(s)	398, 768, 957, 1008
BfaI	CTAG	3 cut(s)	128, 410, 750
BfmI	CTRYAG	1 cut(s)	502
BfoI	RGCGCY	1 cut(s)	256
BfrI	CTTAAG	1 cut(s)	137
BfuI	GTATCC	1 cut(s)	427
BglII	AGATCT	2 cut(s)	1053, 1087
BisI	GCNGC	4 cut(s)	325, 367, 1241, 1353
BlsI	GCNGC	4 cut(s)	326, 368, 1242, 1354
Bme1390I	CCNGG	3 cut(s)	271, 293, 1367
BmeRI	GACNNNNNGTC	1 cut(s)	1039
BmeT110I	CYCGRG	1 cut(s)	1024
BmiI	GGNNCC	1 cut(s)	1408
BmrFI	CCNGG	3 cut(s)	271, 293, 1367
BmrI	ACTGGG	2 cut(s)	439, 678
BmsI	GCATC	3 cut(s)	447, 1104, 1282
BmuI	ACTGGG	2 cut(s)	439, 678
BpiI	GAAGAC	1 cut(s)	860
BplI	GAGNNNNNCTC	2 cut(s)	1007, 1039
BpmI	CTGGAG	3 cut(s)	48, 914, 1328
Bpu10I	CCTNAGC	1 cut(s)	1014
BpuEI	CTTGAG	1 cut(s)	1290
BsaBI	GATNNNNATC	2 cut(s)	245, 1086
BsaHI	GRCGYC	1 cut(s)	1040
BsaJI	CCNNGG	1 cut(s)	1366
BsaWI	WCCGGW	1 cut(s)	731
Bsc4I	CCNNNNNNNGG	3 cut(s)	292, 980, 1372
Bse1I	ACTGG	3 cut(s)	434, 673, 1345
Bse3DI	GCAATG	1 cut(s)	1302
Bse8I	GATNNNNATC	2 cut(s)	245, 1086
BseBI	CCWGG	3 cut(s)	271, 293, 1367
BseDI	CCNNGG	1 cut(s)	1366
BseGI	GGATG	1 cut(s)	619
BseJI	GATNNNNATC	2 cut(s)	245, 1086
BseLI	CCNNNNNNNGG	3 cut(s)	292, 980, 1372
BseMI	GCAATG	1 cut(s)	1302
BseMII	CTCAG	3 cut(s)	378, 645, 1005
BseNI	ACTGG	3 cut(s)	434, 673, 1345
BseXI	GCAGC	2 cut(s)	336, 1339
BsgI	GTGCAG	1 cut(s)	900
BshFI	GGCC	2 cut(s)	274, 338
BsiHKCI	CYCGRG	1 cut(s)	1024
BsiSI	CCGG	1 cut(s)	732
BslFI	GGGAC	1 cut(s)	828
BslI	CCNNNNNNNGG	3 cut(s)	292, 980, 1372
BsmAI	GTCTC	4 cut(s)	398, 768, 957, 1008
BsmBI	CGTCTC	1 cut(s)	1008
BsmFI	GGGAC	1 cut(s)	828
BsmI	GAATGC	1 cut(s)	106
BsnI	GGCC	2 cut(s)	274, 338
BsoBI	CYCGRG	1 cut(s)	1024
Bsp143I	GATC	8 cut(s)	141, 277, 532, 721, 1053, 1087, 1218, 1406
BspACI	CCGC	2 cut(s)	366, 1240
BspANI	GGCC	2 cut(s)	274, 338
BspCNI	CTCAG	3 cut(s)	379, 646, 1006
BspHI	TCATGA	1 cut(s)	529
BspLI	GGNNCC	1 cut(s)	1408
BspPI	GGATC	3 cut(s)	272, 1401, 1414
BspTI	CTTAAG	1 cut(s)	137
BsrDI	GCAATG	1 cut(s)	1302
BsrI	ACTGG	3 cut(s)	434, 673, 1345
BssECI	CCNNGG	1 cut(s)	1366
BssMI	GATC	8 cut(s)	141, 277, 532, 721, 1053, 1087, 1218, 1406
BssNI	GRCGYC	1 cut(s)	1040
BssSI	CACGAG	1 cut(s)	882
Bst2BI	CACGAG	1 cut(s)	882
Bst2UI	CCWGG	3 cut(s)	271, 293, 1367
Bst4CI	ACNGT	5 cut(s)	101, 503, 701, 830, 1231
Bst6I	CTCTTC	1 cut(s)	717
BstACI	GRCGYC	1 cut(s)	1040
BstAFI	CTTAAG	1 cut(s)	137
BstC8I	GCNNGC	1 cut(s)	1021
BstDEI	CTNAG	4 cut(s)	387, 464, 654, 1014
BstF5I	GGATG	1 cut(s)	619
BstH2I	RGCGCY	1 cut(s)	256
BstHHI	GCGC	1 cut(s)	255
BstKTI	GATC	8 cut(s)	144, 280, 535, 724, 1056, 1090, 1221, 1409
BstMAI	GTCTC	4 cut(s)	398, 768, 957, 1008
BstMBI	GATC	8 cut(s)	141, 277, 532, 721, 1053, 1087, 1218, 1406
BstMWI	GCNNNNNNNGC	4 cut(s)	59, 363, 1280, 1301
BstNI	CCWGG	3 cut(s)	271, 293, 1367
BstNSI	RCATGY	1 cut(s)	33
BstSCI	CCNGG	3 cut(s)	269, 291, 1365
BstSFI	CTRYAG	1 cut(s)	502
BstV1I	GCAGC	2 cut(s)	336, 1339
BstV2I	GAAGAC	1 cut(s)	860
BstX2I	RGATCY	3 cut(s)	1053, 1087, 1406
BstXI	CCANNNNNNTGG	1 cut(s)	450
BstYI	RGATCY	3 cut(s)	1053, 1087, 1406
BsuI	GTATCC	1 cut(s)	427
BsuRI	GGCC	2 cut(s)	274, 338
BtgZI	GCGATG	1 cut(s)	470
BtsCI	GGATG	1 cut(s)	619
BtsI	GCAGTG	1 cut(s)	912
BtsIMutI	CAGTG	4 cut(s)	427, 835, 912, 917
Cac8I	GCNNGC	1 cut(s)	1021
CciI	TCATGA	1 cut(s)	529
CfoI	GCGC	1 cut(s)	255
CseI	GACGC	1 cut(s)	981
Csp6I	GTAC	4 cut(s)	27, 837, 848, 984
CviAII	CATG	6 cut(s)	30, 185, 530, 755, 956, 1270
CviQI	GTAC	4 cut(s)	27, 837, 848, 984
DdeI	CTNAG	4 cut(s)	387, 464, 654, 1014
DpnI	GATC	8 cut(s)	143, 279, 534, 723, 1055, 1089, 1220, 1408
DpnII	GATC	8 cut(s)	141, 277, 532, 721, 1053, 1087, 1218, 1406
DriI	GACNNNNNGTC	1 cut(s)	1039
EaeI	YGGCCR	1 cut(s)	336
Eam1104I	CTCTTC	1 cut(s)	717
Eam1105I	GACNNNNNGTC	1 cut(s)	1039
EarI	CTCTTC	1 cut(s)	717
Eco32I	GATATC	1 cut(s)	924
Eco47III	AGCGCT	1 cut(s)	254
Eco57I	CTGAAG	2 cut(s)	770, 854
Eco88I	CYCGRG	1 cut(s)	1024
EcoRII	CCWGG	3 cut(s)	269, 291, 1365
EcoRV	GATATC	1 cut(s)	924
Esp3I	CGTCTC	1 cut(s)	1008
FaeI	CATG	6 cut(s)	33, 188, 533, 758, 959, 1273
FalI	AAGNNNNNCTT	2 cut(s)	970, 1002
FaqI	GGGAC	1 cut(s)	828
FatI	CATG	6 cut(s)	29, 184, 529, 754, 955, 1269
FauNDI	CATATG	1 cut(s)	234
Fnu4HI	GCNGC	4 cut(s)	325, 367, 1241, 1353
FokI	GGATG	1 cut(s)	626
Fsp4HI	GCNGC	4 cut(s)	325, 367, 1241, 1353
FspBI	CTAG	3 cut(s)	128, 410, 750
GlaI	GCGC	1 cut(s)	254
GluI	GCNGC	4 cut(s)	325, 367, 1241, 1353
GsuI	CTGGAG	3 cut(s)	48, 914, 1328
HaeII	RGCGCY	1 cut(s)	256
HaeIII	GGCC	2 cut(s)	274, 338
HapII	CCGG	1 cut(s)	732
HgaI	GACGC	1 cut(s)	981
HhaI	GCGC	1 cut(s)	255
Hin1I	GRCGYC	1 cut(s)	1040
Hin1II	CATG	6 cut(s)	33, 188, 533, 758, 959, 1273
Hin6I	GCGC	1 cut(s)	253
HinP1I	GCGC	1 cut(s)	253
HindIII	AAGCTT	1 cut(s)	1281
HinfI	GANTC	6 cut(s)	229, 675, 769, 790, 800, 1382
HpaII	CCGG	1 cut(s)	732
HphI	GGTGA	4 cut(s)	101, 721, 987, 1157
Hpy166II	GTNNAC	3 cut(s)	38, 97, 1104
Hpy188I	TCNGA	4 cut(s)	181, 487, 789, 826
Hpy8I	GTNNAC	3 cut(s)	38, 97, 1104
HpyAV	CCTTC	4 cut(s)	356, 1294, 1372, 1397
HpyCH4III	ACNGT	5 cut(s)	101, 503, 701, 830, 1231
HpyCH4IV	ACGT	1 cut(s)	1040
HpyCH4V	TGCA	7 cut(s)	106, 917, 1117, 1154, 1226, 1295, 1334
HpyF10VI	GCNNNNNNNGC	4 cut(s)	59, 363, 1280, 1301
HpyF3I	CTNAG	4 cut(s)	387, 464, 654, 1014
HpySE526I	ACGT	1 cut(s)	1040
Hsp92I	GRCGYC	1 cut(s)	1040
Hsp92II	CATG	6 cut(s)	33, 188, 533, 758, 959, 1273
HspAI	GCGC	1 cut(s)	253
Kzo9I	GATC	8 cut(s)	141, 277, 532, 721, 1053, 1087, 1218, 1406
LmnI	GCTCC	2 cut(s)	67, 202
Lsp1109I	GCAGC	2 cut(s)	336, 1339
LweI	GCATC	3 cut(s)	447, 1104, 1282
MaeI	CTAG	3 cut(s)	128, 410, 750
MaeII	ACGT	1 cut(s)	1040
MaeIII	GTNAC	7 cut(s)	375, 506, 910, 993, 1070, 1253, 1265
MalI	GATC	8 cut(s)	143, 279, 534, 723, 1055, 1089, 1220, 1408
MboI	GATC	8 cut(s)	141, 277, 532, 721, 1053, 1087, 1218, 1406
MflI	RGATCY	3 cut(s)	1053, 1087, 1406
MlsI	TGGCCA	1 cut(s)	338
MluCI	AATT	5 cut(s)	221, 287, 340, 818, 1065
MluNI	TGGCCA	1 cut(s)	338
MlyI	GAGTC	1 cut(s)	784
Mox20I	TGGCCA	1 cut(s)	338
MroXI	GAANNNNTTC	1 cut(s)	1429
MscI	TGGCCA	1 cut(s)	338
MseI	TTAA	2 cut(s)	138, 596
Msp20I	TGGCCA	1 cut(s)	338
MspCI	CTTAAG	1 cut(s)	137
MspI	CCGG	1 cut(s)	732
MspR9I	CCNGG	3 cut(s)	271, 293, 1367
Mva1269I	GAATGC	1 cut(s)	106
MvaI	CCWGG	3 cut(s)	271, 293, 1367
MwoI	GCNNNNNNNGC	4 cut(s)	59, 363, 1280, 1301
NdeI	CATATG	1 cut(s)	234
NdeII	GATC	8 cut(s)	141, 277, 532, 721, 1053, 1087, 1218, 1406
NlaIII	CATG	6 cut(s)	33, 188, 533, 758, 959, 1273
NlaIV	GGNNCC	1 cut(s)	1408
NmuCI	GTSAC	2 cut(s)	910, 993
NspI	RCATGY	1 cut(s)	33
PagI	TCATGA	1 cut(s)	529
PciI	ACATGT	1 cut(s)	29
PcsI	WCGNNNNNNNCGW	1 cut(s)	1398
PctI	GAATGC	1 cut(s)	106
PdmI	GAANNNNTTC	1 cut(s)	1429
PfeI	GAWTC	5 cut(s)	229, 675, 769, 800, 1382
PflMI	CCANNNNNTGG	1 cut(s)	292
PfoI	TCCNGGA	1 cut(s)	291
PkrI	GCNGC	4 cut(s)	326, 368, 1242, 1354
PleI	GAGTC	1 cut(s)	784
PpsI	GAGTC	1 cut(s)	784
PscI	ACATGT	1 cut(s)	29
Psp6I	CCWGG	3 cut(s)	269, 291, 1365
PspGI	CCWGG	3 cut(s)	269, 291, 1365
PspN4I	GGNNCC	1 cut(s)	1408
PsrI	GAACNNNNNNTAC	2 cut(s)	19, 51
PsuI	RGATCY	3 cut(s)	1053, 1087, 1406
RsaI	GTAC	4 cut(s)	28, 838, 849, 985
RsaNI	GTAC	4 cut(s)	27, 837, 848, 984
SaqAI	TTAA	2 cut(s)	138, 596
SatI	GCNGC	4 cut(s)	325, 367, 1241, 1353
Sau3AI	GATC	8 cut(s)	141, 277, 532, 721, 1053, 1087, 1218, 1406
SchI	GAGTC	1 cut(s)	784
ScrFI	CCNGG	3 cut(s)	271, 293, 1367
SfaNI	GCATC	3 cut(s)	447, 1104, 1282
SfcI	CTRYAG	1 cut(s)	502
SmlI	CTYRAG	2 cut(s)	137, 1305
SmoI	CTYRAG	2 cut(s)	137, 1305
Sse9I	AATT	5 cut(s)	221, 287, 340, 818, 1065
SsiI	CCGC	2 cut(s)	366, 1240
SspMI	CTAG	3 cut(s)	128, 410, 750
StyD4I	CCNGG	3 cut(s)	269, 291, 1365
TaaI	ACNGT	5 cut(s)	101, 503, 701, 830, 1231
TaiI	ACGT	1 cut(s)	1043
TaqI	TCGA	2 cut(s)	772, 1133
TasI	AATT	5 cut(s)	221, 287, 340, 818, 1065
TauI	GCSGC	2 cut(s)	369, 1243
TfiI	GAWTC	5 cut(s)	229, 675, 769, 800, 1382
Tru1I	TTAA	2 cut(s)	138, 596
Tru9I	TTAA	2 cut(s)	138, 596
TscAI	CASTG	4 cut(s)	434, 835, 919, 924
TseFI	GTSAC	2 cut(s)	910, 993
TseI	GCWGC	2 cut(s)	324, 1352
Tsp45I	GTSAC	2 cut(s)	910, 993
TspDTI	ATGAA	6 cut(s)	251, 461, 614, 891, 1098, 1313
TspGWI	ACGGA	3 cut(s)	854, 990, 1121
TspRI	CASTG	4 cut(s)	434, 835, 919, 924
Van91I	CCANNNNNTGG	1 cut(s)	292
Vha464I	CTTAAG	1 cut(s)	137
XceI	RCATGY	1 cut(s)	33
XmnI	GAANNNNTTC	1 cut(s)	1429
XspI	CTAG	3 cut(s)	128, 410, 750
ZraI	GACGTC	1 cut(s)	1041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.